Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_000913	3,206,492	T→G	13.7%	V11G (GTG→GGG)	ttdA →	L‑tartrate dehydratase, alpha subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,206,492	0	T	G	13.7%	177.7 / 2.7	90	V11G (GTG→GGG)	ttdA	L‑tartrate dehydratase, alpha subunit
Reads supporting (aligned to +/- strand):  ref base T (22/45);  new base G (10/3);  total (40/50)
Fisher's exact test for biased strand distribution p-value = 4.65e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

AATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTT‑CCAG‑ACAAAT‑ACAAAAACTGG‑AGTTGCCATGATGAGCGAAAG‑T‑AAT‑AAGCAACAGGCAGTGAAT‑AAGTT‑GACAGAG‑ATTGTCGCTAACTTTACCGCC‑ATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGGTTCCCGCTTCCCACTGCTT  >  NC_000913/3206259‑3206730                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                    aaTTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTT‑CCAG‑ACAAAT‑ACAAAAACTGG‑AGTTGCCATGATGAGCGAAAG‑T‑AAT‑AAGCAACAGGCAGTGAAT‑a                                                                                                                                                                                                                                               <  2:1131454/239‑1 (MQ=255) aaTTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTT‑CCAG‑ACAAAT‑ACAAAAACTGG‑AGTTGCCATGATGAGCGAAAG‑T‑AAT‑AAGCAACAGGCAGTGAAT‑a                                                                                                                                                                                                                                               <  1:1150511/239‑1 (MQ=255)   ttATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTT‑CCAG‑ACAAAT‑ACAAAAACTGG‑AGTTGCCATGATGAGCGAAAG‑T‑AAT‑AAGCAACAGGCAGTGAAT‑AAg                                                                                                                                                                                                                                             <  2:1121145/239‑1 (MQ=255)       ccGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑GGGATTTTT‑TCCA‑ACAAAT‑ACAAAAAATAG‑AGATGCCCTGATGGGGGAAAG‑T‑AAT‑TAGCAAAAAGGAAGGAAC‑AAGTT‑gt                                                                                                                                                                                                                                        >  2:329533/1‑238 (MQ=255)        cGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTT‑TCAG‑ACAAAA‑AAAAAAACAGG‑GGGTGGCATGTTGAGCGAAAG‑A‑AAT‑AAAAAAAAGACAGGGAAT‑aaagttag                                                                                                                                                                                                                                        >  2:781108/1‑233 (MQ=255)              tgtgATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTT‑CCAG‑ACAAAT‑ACAAAAACTGG‑AGTTGCCATGATGAGCGAAAG‑T‑AAT‑AAGCAACAGGCAGTGAAT‑AAGTT‑GACAgag‑a                                                                                                                                                                                                                                 <  2:149676/238‑1 (MQ=255)              tgtgATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTT‑CCAG‑ACAAAT‑ACAAAAACTGG‑AGTTGCCATGATGAGCGAAAG‑T‑AAT‑AAGCAACAGGCAGTGAAT‑AAGTT‑GACAGAG‑At                                                                                                                                                                                                                                <  1:857712/239‑1 (MQ=255)                  aTAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTT‑TCTA‑ACACAA‑AAAAAAAATGG‑AGTTTCCATGATGAGGGAAAA‑T‑AAT‑AAGAAAAAAGAAGGGAAT‑aaaaagactcttttacac                                                                                                                                                                                                                              >  1:918535/1‑223 (MQ=255)                  aTAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAAATTTT‑TTAT‑ACAAAT‑ACAAAAAAAGG‑GGTTGGCCTGATGAGGGGAAG‑T‑AAT‑AAGAAAAAGACAGAGAAT‑AAGAT‑GACAGAG‑ATTTTc                                                                                                                                                                                                                            >  2:529893/1‑239 (MQ=255)                       cgcAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑GGAATTTTT‑TCAG‑ACAAAA‑ACAAAAAATGA‑GGTTGCCATGATGAGCGGAAG‑T‑AAT‑AAACAAAAAGCAGTGAAA‑AAGTT‑GACAGAG‑ATTGTGGCTa                                                                                                                                                                                                                        >  2:469486/1‑238 (MQ=255)                          aGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTT‑TCAA‑ACAAAA‑ACAAAAAATGG‑AGTTTCCATAATGGGCGAAAG‑G‑AAA‑AAACAACAAGAAAAGAAA‑AAAAT‑GACAgag‑aattgcgcctactt                                                                                                                                                                                                                    >  2:959124/1‑226 (MQ=255)                               aTTTCGCAAAACATTGCCATCCCCGTCTCTGGTGAAATATTCATTCTTATTTTCGCGTTGATTCAGGATCTCTTAATTAC‑ATATTCACGGTGACAAAAAATATAAAACCACATTTTTAGTTGGAGTTTGTGGCGG‑TGAATTTTC‑CCAG‑AAAAAT‑ACAAAACGTGG‑GGTCCCCTTGATGAGCAAAAG‑T‑ATT‑AAGCAACAGGCAGTGAAT‑AAGTC‑GCCAGAT‑ATGGTGCCTATCttgtcc                                                                                                                                                                                                                <  1:329533/238‑5 (MQ=255)                                 ttCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAAATTTT‑TTAG‑AAAAAA‑ACAAAAAATGG‑AGTTGCCATGATGAGGGAAAG‑T‑AAT‑AAACAAAAAGCAGCGAATAAAGTT‑G‑CAGAG‑ATTGTCGCTAAATTTatcac                                                                                                                                                                                                              >  1:711860/1‑234 (MQ=255)                                      acagcATTGCCATTCCCTGCTCTGGCGCAATATTCATTTTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCAAATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTT‑CCAG‑ACAAAT‑ACAAAAACTGG‑AGTTGCCATGATGAGCGAAAG‑T‑AAT‑AAGCAACAGGCAGTAAAT‑AAGTT‑GACAGAG‑ATTGTCGCTAACTTTACCGCC‑ATGAt                                                                                                                                                                                                       <  2:1143804/235‑1 (MQ=255)                                      aaaaCATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGTATTTTT‑TCAC‑ACAAAT‑AAAAAAAATCG‑GGTTGCCATTATGAGGGAGAG‑T‑AAT‑AAACAAACCGCAGTGAAT‑AAGGT‑GACAGGG‑ATTGTCGTCAACCTTCACGCC‑CTGAt                                                                                                                                                                                                       >  2:968500/1‑239 (MQ=255)                                        aaCATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAAATTTT‑CTAT‑ACAAAT‑AAAAAAAAAAG‑AGGTTCTATGATGTGTGAAAG‑T‑AAT‑AAACAAAAGACAGAGCAT‑AAAAT‑GACAAAG‑Agtgtgtcttacatttacaccaagattt                                                                                                                                                                                                      >  2:965156/1‑216 (MQ=255)                                                cATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGAAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TAAATTTTT‑CCAG‑ACAAAT‑ACAAAAACTGG‑AGTTGCCATGATGAGCGAAAG‑T‑AAT‑AAGCAACAGGCAGTGAAT‑AAGTT‑GACAGAG‑ATTGTCGCTAACTTTACCGCC‑ATGATTTCTACCCGa                                                                                                                                                                                             <  2:192075/239‑1 (MQ=255)                                                cATTCCCTGCTCGGGCGCAATATTCATTCTTATTTTCGCTTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGAAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTT‑CCAG‑ACAAAT‑AAAAAAACTGG‑AGTTGCCATGATGAGCGAAAG‑T‑AAT‑AAGCAACAGGCAGTAAAT‑AAGTT‑GACAGAG‑ATTGTCGCTAACTTTACCGCC‑ATGATTTCTACCCg                                                                                                                                                                                              <  2:966616/238‑1 (MQ=255)                                                  ttCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑CGATTTTTT‑TGCT‑CCATAT‑ACACAAAAACC‑AGGTGTCATGTTTTGGCAAAG‑T‑AAA‑AAAACACAGACACAGAAT‑AAGTT‑TACAGCG‑ATTGTCGTCAACTTTTCCGCC‑CTCATTTTTACCCTAAt                                                                                                                                                                                           >  1:26330/1‑239 (MQ=255)                                                    cccTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGGAATTTT‑TCAC‑ACAAAA‑ACAAAAACACG‑AAGTGTCATGATGGGCGAAAA‑G‑AAA‑AAACAACAAGCAAGGAAT‑AAAAT‑GACAAAG‑AATTTCGCTAACTTTACAGCC‑ATGATTTTTAACCGAATg                                                                                                                                                                                          >  2:618797/1‑238 (MQ=255)                                                     ccTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTT‑TCAG‑AAAAAT‑ACAAAAACTAG‑AGGTGGCATGATGAGGGAAAG‑A‑AAT‑AAAAAACAAACAGGGAAT‑AAAAT‑GACAAAG‑AATTTTGCCAAATTTTTCCCC‑CTAATTTTTACCCCaacttt                                                                                                                                                                                        >  1:1143804/1‑235 (MQ=255)                                                          tcgggacaattatTAATTGTTATTTCCCGTTTCATCCACAAAGTTTTAATTAC‑ATTTTCATGGTGGCAAAAAATAAAAACCCACATTTTTAGTGGTGGTTTGGGGCGT‑TAAATTTTT‑CCAG‑CAAAAT‑AAAAAAACGGG‑AGTTGCAATGATGGGCGAAAG‑T‑AAT‑AAGCAACAGGCAGTAAAT‑AAGGT‑GACAGGG‑ATTGTCGTTAACTTTACCGCC‑ATGATTTCTACCCGAATGCCtgat                                                                                                                                                                                    <  1:920714/228‑1 (MQ=255)                                                            tGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTT‑TTAG‑ACAAAA‑AACAAAAATGG‑AGGTGGCCTGTTGAGCGCAAA‑A‑AAT‑AAAACAAAAGAAGTGAAC‑AAATT‑AACAGAG‑ATTTGTGCCAACATTACCCCC‑ATCAttttttacccactgccctcagag                                                                                                                                                                                 >  1:412029/1‑219 (MQ=255)                                                              gcgcAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TTGATTTTT‑TCCG‑CCAAAA‑AAAAAAAATGG‑AGTTGTCATGATGAGCGGAAG‑G‑AAT‑AAAGAACAAGCAATGAAT‑AAGTT‑GACAAAG‑AGTTTCGCTAACTTTACCGCC‑CTGATTTCTAACCGCATGCCtgctga                                                                                                                                                                                  >  2:325980/1‑236 (MQ=255)                                                              gcgcAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGGATTTTT‑TCAG‑GAAAAA‑AAAAAAAATTG‑AGGTGGCCAGATGAGAGGAAG‑T‑AAA‑AAAAAAAAAGAAAGGGAA‑AAATT‑GAAAGAGAATTGTGCTTAACTTTACGCCC‑AT‑ATTTTTACCCCAAAGCCctatgaagg                                                                                                                                                                               >  2:561769/1‑236 (MQ=255)                                                                    tatttattCTTATTTTGGCTTTGATTCACGAACTGTTAATTAA‑ATATTCGGGGTGGAAAAAAATAAAAAACCACATTTTAAGTGGTATTTGGTGGCGG‑TGAATTTTT‑CCAG‑AAAAAT‑ACAAAAACGGG‑AGTTGCCATGAGGAGCGAAAG‑T‑AAT‑AAGCAACAGGCAGTAAAT‑AAGTT‑GACAGAG‑ATGGTCGTTAACTTTACCGCC‑ATGATTTCTACCCGAATGCCTGATGACGTGGTGGa                                                                                                                                                                         <  1:267027/239‑1 (MQ=255)                                                                    tatTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATAAAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTT‑CCAG‑AAAAAT‑ACAAAAACTGG‑AGTTGCCATGATGAGCGAAAG‑T‑AAT‑AAGCAACAGGCAGTGAAT‑AAGTT‑GACAGAG‑ATTGTCGCTAACTTTACCGCC‑ATGATTTCTACCCGAATGCCTGATGACGTGGTGGa                                                                                                                                                                         <  2:1096815/239‑1 (MQ=255)                                                                    tatGCATGCTTTTTTGCGCGTTGATTCACGAACTATTAATTAA‑ATATTCACGGTGGAAAAAAATAAAAAACCACATTTTGAGTGGTAGTTTGGGGGGG‑TAAATTTTT‑CAAA‑AAAAAA‑AAAAAACCGGG‑AGTTGCCATGAGGAGGGAAAG‑A‑AAT‑AAGAAACAGGCAGTAAAT‑AAGTT‑GACAGAG‑ATTGTCGATAACTTTACCGCC‑ATGATTTCTACCCGAATGCCTGATGACGTGGTGGa                                                                                                                                                                         <  1:1161809/239‑1 (MQ=255)                                                                            cTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTT‑CCAG‑ACAAAT‑ACAAAAACGGG‑AGTTGCCATGATGAGCAAAAG‑T‑AAT‑AAGCAACAGGCAGTGAAT‑AAGTT‑GACAGAG‑ATTGTCGCTAACTTTACCGCC‑ATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTaa                                                                                                                                                                 <  1:1053611/239‑1 (MQ=255)                                                                             attttttcgcggattttCACGATGTGTAAATTAT‑ATATTCACGTGGGGAAAAAATATAAAACCACATTTTAAGTGGTATTTTTTGGGGG‑TAAATTTTT‑CCAG‑ACAAAT‑ACAAAAACTGG‑ATTTGCTATTATCAGCGAAAT‑T‑AAT‑AAGCAGCAGGCAGTTAAT‑AAGTA‑GACAGAA‑TTTTTCCCTAATTTTACCGCC‑ATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTaaa                                                                                                                                                                <  2:1079138/224‑1 (MQ=255)                                                                              tATTTTCGTTTTGATTCACGAACTGTTAATTAA‑ATATTCACGGTGACAAAAAATATAAAACCACATTTTTGGTGGTAGTTTGTGGCGG‑TAAATTTTT‑CCAG‑ACAAAT‑AAAAAAACGGG‑GGTGGCCATGATGGGCGAAAG‑A‑AAT‑AAGAAACAGGAAGTAAAT‑AAGTG‑GAAAGGG‑ATTGTCGCTAACTTTACCGCC‑ATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTaaaa                                                                                                                                                               <  1:164482/239‑1 (MQ=255)                                                                              tATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTT‑CCAG‑ACAAAT‑ACAAAAACTGG‑AGTTGCCATGATGAGCGAAAG‑T‑AAT‑AAGCAACAGGCAGTGAAT‑AAGTT‑GACAGAG‑ATTGTCGCTAACTTTACCGCC‑ATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTaaaa                                                                                                                                                               <  2:990616/239‑1 (MQ=255)                                                                              tATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTT‑CCAG‑ACAAAA‑ACAAAAACTGG‑AGTTGCCATGATGAGCGGAAG‑G‑AAA‑AAACAACAAGCAGTGAAT‑AAATT‑GACAGAG‑ATTGTCGCTAACTTTACCGCC‑ATAATTTCTACCCGAATTCCTGATGACGGGGGGGAtaaaataaaa                                                                                                                                                               >  2:516344/1‑239 (MQ=255)                                                                              tATTTACGCGTTGATTCACGATCTTCTAATCAC‑ATATGCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTT‑CCAG‑ACAAAT‑ACAAAAACTGG‑AGTTGCCATGATGAGCGAAAG‑T‑AAA‑AAGCAACAGGCAGTGAAT‑AAGTT‑GACAGAG‑ATTGTCGTTAACTTTACCGCC‑ATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTaaaa                                                                                                                                                               <  2:903891/239‑1 (MQ=255)                                                                               aTTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑GGAATTTTT‑TCAT‑AACAAA‑AAAAAAAATAG‑GGGTGCCCTGATGAAGAAAAG‑T‑AAA‑AAAAAAAAAGCACGGAAT‑AAAAT‑TACAAAA‑AAGGTTGCCTACTTTAACCCC‑ACAATTTTTACCCCAAATGCTGTTGAAGGGGTGGGTAAAACaaaaa                                                                                                                                                              >  1:731474/1‑238 (MQ=255)                                                                                      cttttaTTCACGAACTGTTAATTAC‑ATATTCACGGTGGAAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTT‑CCAG‑ACAAAT‑ACAAAAACGGG‑AGTTGCCATGATGAGCGAAAG‑T‑AAT‑AAGCAACAGGCAGTGAAT‑AAGTT‑AACAGAG‑ATTGTCGCTAACTTTACCGCC‑ATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTaaa                                                                                                                                                       <  1:529893/234‑1 (MQ=255)                                                                                                acgaattttAAATACAATATTCAGGGTGGAAAAAAATAAAAAACAACATTTTTAGGGGTAGTTTGTGGCGG‑TGAATTTTT‑CCAG‑ACAAAT‑ACAAAAACTGG‑AGTTGCCATGATGAGCGAAAG‑T‑AAT‑AAGCAACGGGCATTGAAT‑AAGTG‑GACAGAG‑ATTGTCGCTAATTTTACCGCC‑ATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑Ga                                                                                                                                             <  1:618797/232‑1 (MQ=255)                                                                                                     tGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGATGAA‑TTTT‑CTAGAACAAAA‑AAAAAAAC‑GG‑CGTTGCCCTGTTGTGAGGAAA‑G‑AAT‑AAAACACAAAGAGAGACA‑AAGGT‑GACAGAA‑ATATGCGGTGACTTTCACGCC‑CTGACTTTTACCCGAATCCCTGGGTACGGGGTGGATAAAACAAAACAGACAAAgggcgcgcgaacgac                                                                                                                                        >  1:1010358/1‑226 (MQ=255)                                                                                                     tGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑GGAATTTTT‑TCAG‑AAAAAA‑AAAAAAAATGG‑AGGTGGCATGATGAGCGGAAG‑A‑AAT‑AAACAAAAAGCCGGGAAA‑AAAAT‑GACAAAG‑AATGTTGCTAACTTTACCTCCAATGATTTTTCCCCGAA‑GGCTGATTATGCGGGGGTGAAAATAAAAAACCTAAAAGGTGCA‑GCAAcgg                                                                                                                                        >  1:96564/1‑237 (MQ=255)                                                                                                           ttAC‑ATATTCACGGTGGCAAAAAATATAAAACCTCATTTTTATTGATAGTTGGTGGCGG‑TGAATTTGT‑CCAG‑ACAAAA‑AAAAAAACTGG‑ATTTGCAATGAGAAGCGAAAT‑T‑AAT‑AAGCAACAGGCAGGAAAT‑AATTT‑GACAGAG‑ATTGTCTCTAACTTTACCGCC‑ATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGTATGCC‑GAAACGTCGTCGAt                                                                                                                                 <  2:165772/239‑1 (MQ=255)                                                                                                                 ttttCAGGGTGGAAAAAAATAAAAAACCAAATTTTTAGTGGTAGTTTGGGGCGG‑TGAATTTTT‑CCAG‑AAAAAT‑AAAAAAACTGA‑AGTTGCAAAGATGAGCAAAAG‑T‑AAA‑AAGCAACAGGCAGTGAAT‑AAGTT‑GACAGAG‑ATTGTCGCTAACTTTACCGCC‑ATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATGGGGa                                                                                                                            <  2:844547/237‑1 (MQ=255)                                                                                                                 tatTCGGGGTGGAAAAAAATATAAAACCACATTGTTAGTGGTAGTTTGTGGGGG‑TAAATTTTT‑CCAG‑AAAAAA‑AAAAAAACTGG‑ATTTGCCAGAATGAGAGAAAG‑T‑AAT‑AAGCAACAGGCAGTAAAT‑AAGTT‑AACAGAG‑ATGGTCGTTAACTTTACCGCC‑ATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATGGGGa                                                                                                                            <  1:52520/239‑1 (MQ=255)                                                                                                                 tatTCACGGTGGAAAAAAAAAAAAACCCACATTTTTAGTGGTATTTGGGGGCGG‑‑GAATTTTTCCCAA‑AAAAAT‑AAAAAAGCGGG‑AGTTGCCATGAGGAGTAAAAA‑A‑AAA‑AAACAACAGGAATTGAAT‑AATTT‑GACAGGG‑ATTGTCCCTATTTTTACCGCC‑ATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATGGGGa                                                                                                                            <  1:503169/239‑1 (MQ=255)                                                                                                                  atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑CGAAATTTT‑TTAC‑ACAAAA‑AAAAAAACATG‑AGTTGGCCTGATGTGCGAAAG‑TAAAA‑AAGAAAAACACAGGCAAA‑AAATT‑G‑CAGAG‑AATGTCGCTAACTTTACCCCC‑CCGATTTTTTCCCCCAAGCCCGATGTCAGGGGGGGGAAAACAAAACAACCAAAGGCTGcccacaacaccccgatggggag                                                                                                                            >  1:220838/1‑219 (MQ=255)                                                                                                                    tCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑CGAATTTTT‑TCTG‑ACAAAG‑ACAAAAACCTG‑GGTTACTCTTTTGAGAGATAGAA‑AAT‑AAAGAA‑AAGCAGGTAAT‑AAGGT‑GGCAGGT‑GTGGTTTGGAACTTTACCGCC‑ATAATTTCTTCCCCTATGCCTCATTAGGCGGTGGAGAAAACAAAACAGGTAAAGGATGCCTGAAActtgttggtgggggaaa                                                                                                                          >  1:1101985/1‑223 (MQ=255)                                                                                                                        ggTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAAATTTT‑TCAT‑AAAAAT‑ATAAAAAAATG‑AGTTGACATGATGAGCGAAAG‑G‑AAT‑AAGAAACAAGCAGTGAAA‑AAGAT‑GAGAAAG‑AATTTCTCTAAATTTTACCCC‑CTGATTTTTATCCGAATCCCCTGTGACGTGGTGGATAAACAAAAACAGCTAAAGAATACC‑GAAAATACGTCGATGGGGAAAAatat                                                                                                                     >  2:539887/1‑239 (MQ=255)                                                                                                                         gTGGCAAAAAATATAAAACCACATTTTTAGTGGAAGTTTGTGGCGG‑TGAATTTTT‑CCAG‑ACAAAT‑ACAAAAACTGG‑AGTTGCCATGATGAGCGAAAG‑T‑AAT‑AAGCAACAGGCAGTGAAT‑AAGTT‑GACAGAG‑ATTGTCGCTAACTTTACCGCC‑ATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATGGGGAAAATTAt                                                                                                                     <  2:96564/238‑1 (MQ=255)                                                                                                                         gTGGAAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTT‑CCAA‑ACAAAA‑ACAAAAACTGG‑AGTTGCCATGATGAGCGAAAG‑T‑AAT‑AAGCAACAGGCAGTAAAT‑AAGTT‑GACAGAG‑ATTGTCGCTAACTTTACCGCC‑ATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATGGGGAAAATTAt                                                                                                                     <  2:538784/238‑1 (MQ=255)                                                                                                                         gTGGAAAAAAAAAAAAAACCACATTTTTAGTGGTAGTTGGAGGCGG‑TAAATTTTT‑CCAG‑ACAAAA‑ACAAAAACGGG‑AGTGGCCATGATGAGCGAAAG‑A‑AAT‑AAGCAACAGGCAGTGAAT‑AAGTT‑GCAAGAG‑ATTGTCGCTAACTTTACCGCC‑ATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATGGGGAAAATTAt                                                                                                                     <  1:1131230/238‑1 (MQ=255)                                                                                                                          tGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTT‑TCAG‑ACAAAA‑ACAAAAACTGG‑AGGTGCCATGATGAGCGGAAA‑G‑AAT‑AAAAAAAAGGCAGAGAAT‑AAGAT‑GACAGAG‑ATTGTCGCTAACTTTTCCGCC‑ATGATTTCTACCCCCATGCCTGATGACGTGGTGGATAAACTAAAACAACTAAAAGATGCC‑GAAAAGTCGTCGCTGGGGGAAATTAttt                                                                                                                   >  2:52520/1‑237 (MQ=255)                                                                                                                          tGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTT‑TCAG‑ACAAAA‑ACAAAAAATTG‑AGTTTCCATGATGGGGGAAAG‑T‑AAT‑AAAAAACAGGCAGTGGAT‑AAAGT‑GACAGAG‑ATTGTTGCTAAATTTTCCCCC‑CTGGTTTTTACCCCAAAGCCTGGTGACCGGGTGGATTAACTAAAACAACTAAATGATGCC‑GGAACGTCGTCGCTGGGGGAAAtttttt                                                                                                                   >  2:1177000/1‑235 (MQ=255)                                                                                                                          tGGAAAAAAATATAAAACCACATTTTAAGTGTGAGTTTGTGGCGG‑TGAATTTTT‑CCAA‑AAAAAT‑AAAAAAACGGG‑AGTTGCCAGGAAAAGCAAAAG‑A‑AAT‑AAGCAACAGTCATTAAAT‑AAGTT‑AACAGAG‑TTTGTCGCTAACTTTACCGCC‑ATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATGGGGAAAATTATc                                                                                                                    <  1:959124/238‑1 (MQ=255)                                                                                                                          gggaaaaaaaTATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTG‑CAAG‑ACAAAT‑AAAAAAACTGG‑AGTTGCCATGATGAGCGAAAG‑T‑AAT‑AAGAAACAGGAAGTGAAT‑AAGTT‑GACAGAG‑ATTGTCGCTACCTTTACCGCC‑ATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATGGGGAAAATTATc                                                                                                                    <  2:1101985/234‑1 (MQ=255)                                                                                                                                aaaaTAAAAAACCACATTTTTAGTGGTAGTTGGGGGCGG‑GAAATTTTC‑CCAG‑AAAAAT‑AAAAAAACTGG‑AGTTGCAAGGATGAGCGAAAG‑T‑AAT‑AAGCAACAGGCAGTGAAT‑AAGTG‑GACAGAG‑ATTGTCGCTAACTTTACCGCC‑ATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATGGGGAAAATTATCTACCATa                                                                                                             <  2:416227/239‑1 (MQ=255)                                                                                                                                  aaTATAAAACAAAATTTTTAGGGGTAGGTGGGGGGGG‑GGAATTTTA‑CCAG‑A‑AAAA‑ACAAAAACGGGAAGTGGCCAGGATGAGCAAAAG‑A‑AAA‑AAGCAACAGGCAGGAAAT‑AAGTT‑GAAAGGA‑ATGGTCGTAATTTTTACCGCC‑ATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATGGGGAAAATTATCTACCATACg                                                                                                           <  1:968500/239‑1 (MQ=255)                                                                                                                                  aaTAAAAACCCACATTTTAAGTGGGATTTTGGGGGGG‑TAAATTTTA‑CAAA‑AGAAAT‑AAAAAAAAGGG‑AGTTGCCATAAAGAGCAAAAG‑T‑AAT‑AAGAAACAGGCA‑TGAAA‑AAATTAGACAAAG‑TTTGTCGCAAATTGTACCGCC‑ATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATGGGGAAAATTATCTACCATACg                                                                                                           <  2:1051917/239‑1 (MQ=255)                                                                                                                                             acaTTTTAAGGGGTAGTTTGTGGCGA‑T‑AATTTTT‑CCCA‑ATAAATAAGAAAAACGGA‑AGTTGCAGAGATGAACAAAAG‑A‑AAT‑AAGCAACAGGCAGAGAAT‑AGGTT‑GACAGAA‑ATTGTCAAAAAGTTAACCGCC‑ATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGacaa                                                                                                <  2:568561/239‑1 (MQ=255)                                                                                                                                                 ttttAGTGGTAGTTTGTGGCGG‑TGAATTTTT‑TCAG‑ACAAAT‑AAAAAAAAATG‑AGTTGCCCTTATGAGCGGAAG‑G‑AAT‑AAACAAAAAGCAGAGAAT‑AAATT‑GACAGAG‑AATTTCGCCTACTTTTACGCC‑CTGATTTCTACCCGAAAGCCTTATGACGTGGTGGGTAAAATAAAACAACTAAAAGATGCC‑GAAACGACGGCGATGGGGAAAAATATTTACCAAACGATGTTTGaccacct                                                                                             >  2:219713/1‑236 (MQ=255)                                                                                                                                                           ggttgtgggCGG‑TGAATTTTT‑CCAA‑AAAAAT‑ACAAAAACGGG‑AGTGCCGATGATGAGCAAAAG‑T‑AAT‑AAGCAGCAGGCGGTGAAT‑AAGTT‑GACAGAG‑ATGTTCGTTAATTTTCCCGCC‑ATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGa                                                                                  <  2:26330/232‑1 (MQ=255)                                                                                                                                                           attttGTGGCGG‑TAAATTTTT‑CCAG‑AAAAAT‑ACAAAAACGGG‑AGTGGCCATGATGAGCGAAAG‑T‑AAT‑AAGCAACGGGAAGTGAAT‑AAGTT‑GACAGAG‑ATTGTCGCTAATTTTACCGCC‑ATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGa                                                                                  <  2:220838/237‑1 (MQ=255)                                                                                                                                                           aGTTTGTGGCGG‑TAAATTTTT‑CAAG‑AAAAAT‑ACAAAAACGGG‑AGTTGCCATGATGAGCGAAAG‑T‑AAT‑AAGCAACAGGCATTGAAT‑AAGTT‑GACAGAG‑TTTGTCGCTAACTTTACCGCC‑ATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGa                                                                                  <  2:856308/239‑1 (MQ=255)                                                                                                                                                            ttttGGGGCGG‑GAAATTTTT‑CCAG‑AAAAAT‑ACAAAAACGGG‑ATTTGCCAGGATGGGCAAAAG‑T‑AAA‑AACCAACAGGAAGTGAAA‑AATTG‑GACAGAG‑ATTGTCGTTAATTTTACCGCC‑ATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGAt                                                                                 <  1:561769/238‑1 (MQ=255)                                                                                                                                                            ggtcggtgcgggaaagttttt‑GCGG‑AAAAAT‑ACAAAATGGGA‑GGTGGCAATGACGAG‑AAAAA‑T‑AATCAAGCAACGGGTAGTGAAT‑GAGTT‑AACAGAG‑ATTGTCGAACACTTGACCGCC‑ATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGa                                                                                  <  2:1136890/223‑1 (MQ=255)                                                                                                                                                                         gAATTTTT‑CCAG‑ACAAAT‑ACAAAAACTGA‑AGTGGCCATGATGAGCGAAAG‑T‑AAT‑AAGCAACAGGCAGTGAAT‑AAGTT‑GACAGAG‑ATTGTCGCTAACTTTACCGCC‑ATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCg                                                                     <  2:731474/239‑1 (MQ=255)                                                                                                                                                                           aTTTTT‑CCAG‑AAAAAT‑ACAAAAACTGG‑AGTTGCCATGATGAGAGAAAA‑T‑AAA‑AAGAAACAGGCAGTGAAT‑AAGTT‑GACAGAG‑TTTGTCGCAAACTTTACCGCC‑ATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCg                                                                     <  1:348989/237‑1 (MQ=255)                                                                                                                                                                              ttt‑CCAG‑ACAAAT‑ACAAAAACTGG‑ATTTGCCATGATGAGCAAAAG‑T‑AAT‑AACCAACAGGCAGTGAAT‑AAGTT‑GACAGAG‑ATTGTCGCTAACTTTACCGCC‑ATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTcctg                                                                <  2:318781/239‑1 (MQ=255)                                                                                                                                                                              ttt‑CCAG‑AAAAAT‑ACAAAAACGGG‑AGTTGCCAGGATGAGCAAAAG‑T‑AAT‑AAGCAACAGGCAGTGAAT‑AAGTT‑GACAGAG‑ATTGTCGCTAACTTTACCGCC‑ATGATTTCTACCCGAATGCCTAATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTcctg                                                                <  2:711860/239‑1 (MQ=255)                                                                                                                                                                                 acaaG‑AAAAAA‑AAAAAAACGGG‑AGTTGCCATGATGGGCGAAAG‑T‑AAT‑AAGCAACAGGCAGTGAAT‑AAGTT‑GAAAGAG‑ATTGTCGCTAATTTTACCGCC‑ATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTcctgcc                                                              <  1:516344/236‑1 (MQ=255)                                                                                                                                                                                       aaaaaT‑ACAAAAACGGG‑AAGTCCCATGAGGAGAAAAAG‑A‑AAT‑AAGCAACAGGCGGGAAAT‑AAGTG‑GAAAGAG‑ATTTTCGCAACTTTTACCGCC‑ATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCa                                                         <  1:965156/237‑1 (MQ=255)                                                                                                                                                                                                  aaaCTGG‑AGTTGCCATGATGAGCGAAAG‑T‑AAT‑AAGCAACAGGCAGTGAAT‑AAGTT‑GACAGAG‑ATTGTCGCTAACTTTACCGCC‑ATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCggg                                               >  1:1038302/1‑239 (MQ=255)                                                                                                                                                                                                   aaCTGG‑AGTTCCGATGATGAGAGAAAG‑T‑AAT‑AAGCAAAGGGCAGTAAAT‑AAGTG‑GAAAGGG‑ATTGTCTCTAACTTTACCGCC‑ATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCgggg                                              <  1:219713/239‑1 (MQ=255)                                                                                                                                                                                                   aaCGGG‑AGTTGCCTTGATGAGCGAAGG‑A‑AAT‑AAGAAACAGGCAGTAAAT‑AAGTT‑GACAGAT‑ATTGTCTCTACTTTTACCGCC‑ATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCgggg                                              <  2:830309/239‑1 (MQ=255)                                                                                                                                                                                                        g‑AGTTGCCATGATGAGCGAAAG‑T‑AAT‑AAGCAACAGGCAGTGAAT‑AAGTT‑GACAGAG‑ATTGTCGCTAACTTTACCGCC‑ATGATTTCTACCCGAATGCCTGATGCCGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGACTCGTCCTGCCTGTCAGGACACCGGGGAGAtt                                         >  2:701767/1‑239 (MQ=255)                                                                                                                                                                                                              gCCATGATGAGCGAAAG‑T‑AAT‑AAGCAACAGGCAGTGAAT‑AAGTT‑GACAGAG‑ATTGTCGCTAACTTTACCGCC‑ATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGt                                     >  2:612925/1‑238 (MQ=255)                                                                                                                                                                                                                gatgatgAGCGAAAG‑T‑AAT‑AAGCAACGGGCAGAGAAT‑AAGTG‑GACAGAG‑TTTGCCGCTAACTTTACCGCC‑ATTATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGttc                                   <  1:781108/237‑1 (MQ=255)                                                                                                                                                                                                                         cGAAAG‑T‑AAT‑AAGCAACAGGCAGTGAAT‑AAGTT‑GACAGAG‑ATTGTCGCTAACTTTACCGCC‑ATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAg                         >  1:1131542/1‑239 (MQ=255)                                                                                                                                                                                                                         cGAAAG‑T‑AAT‑AAGCAACAGGCAGTGAAT‑AAGTT‑GACAGAG‑ATTGTCGCTAACTTTACCGCC‑ATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAg                         >  1:572617/1‑239 (MQ=255)                                                                                                                                                                                                                                            cAGGCAGTGAAT‑AAGTT‑GACAGAG‑ATTGTCGCTAACTTTACCGCC‑ATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGTTGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGCCCTGAATCGTCCTGCCTGTAAGGTCACCGGGGAGATTATGTTCTTCGTTAAAGTCGGTTCCCGCTTcc          >  2:932995/1‑238 (MQ=255)                                                                                                                                                                                                                                            cAGGCAGTGAAT‑AAGTT‑GACAGAG‑ATTGTCGCTAACTTTACCGCC‑ATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGGTTCCCGCTTccc         >  2:1118361/1‑239 (MQ=255)                                                                                                                                                                                                                                            cAGGCAGTGAAT‑AAGTT‑GACAGAG‑ATTGTCGCTAACTTTACCGCC‑ATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGGTTCCCGCTTccc         >  2:802451/1‑239 (MQ=255)                                                                                                                                                                                                                                            cAGGCAGTGAAT‑AAGTT‑GACAGAG‑ATTGTCGCTAACTTTACCGCC‑ATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGGTTCCCGCTTcc          >  2:52305/1‑238 (MQ=255)                                                                                                                                                                                                                                            cAGGCAGTGAAT‑AAGTT‑GACAGAG‑ATTGTCGCTAACTTTACCGCC‑ATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGGTTCCCGCTTcc          >  1:582173/1‑238 (MQ=255)                                                                                                                                                                                                                                            cAGGCAGTGAAT‑AAGTT‑GACAGAG‑ATTGTCGCTAACTTTACCGCC‑ATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGGTTCCCGCTTcc          >  1:299795/1‑238 (MQ=255)                                                                                                                                                                                                                                                cAGTGAAT‑AAGTT‑GACAGAG‑ATTGTCGCTAACTTTACCGCC‑ATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGGTTCCCGCTTCCCACt      >  2:5983/1‑238 (MQ=255)                                                                                                                                                                                                                                                cAGTGAAT‑AAGTT‑GACAGAG‑ATTGTCGCTAACTTTACCGCC‑ATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGGTTCCCGCTTCCAACt      >  2:568956/1‑238 (MQ=255)                                                                                                                                                                                                                                                cAGTGAAT‑AAGTT‑GACAGAG‑ATTGTCGCTAACTTAACCGCC‑ATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGGTTCCCGCTTCCCa        <  2:299828/236‑1 (MQ=255)                                                                                                                                                                                                                                                 aGTGAAT‑AATTT‑GACAGAG‑TTTGTCGCTAACTTTACCGCC‑ATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGa                                                                                  <  2:789269/161‑1 (MQ=255)                                                                                                                                                                                                                                                 aGTGAAT‑AAGTT‑GACAGAG‑ATTGTCGCTAACTTTACCGCC‑ATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATGGGGa                                                                                                                            >  1:61980/1‑119 (MQ=255)                                                                                                                                                                                                                                                 aGTGAAT‑AAGTT‑GACAGAG‑ATTGTCGCTAACTTTACCGCC‑ATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATGGGGa                                                                                                                            <  2:61980/119‑1 (MQ=255)                                                                                                                                                                                                                                                 aGTGAAT‑AAGTT‑GACAGAG‑ATTGTCGCTAACTTTACCGCC‑ATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGa                                                                                  >  1:789269/1‑161 (MQ=255)                                                                                                                                                                                                                                                   tGAAT‑AAGTT‑GACAGAG‑ATTGTCGCTAACTTTACCGCC‑ATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGGTTCCCGCTTCCCACTGCtt  >  2:1109944/1‑239 (MQ=255)                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                    AATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTAC‑ATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTT‑CCAG‑ACAAAT‑ACAAAAACTGG‑AGTTGCCATGATGAGCGAAAG‑T‑AAT‑AAGCAACAGGCAGTGAAT‑AAGTT‑GACAGAG‑ATTGTCGCTAACTTTACCGCC‑ATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCC‑GAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGGTTCCCGCTTCCCACTGCTT  >  NC_000913/3206259‑3206730

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑