| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1265438 = | 129 (0.790) | 4 (0.030) | 4/490 | NT | 3.2% | coding (427/1083 nt) | prfA | peptide chain release factor RF‑1 |
| ? | NC_000913 | 1265469 = | 121 (0.770) | coding (458/1083 nt) | prfA | peptide chain release factor RF‑1 | |||||
GGTGTTAACGTGCTGACCACCCGCCCCTGACGAGCGGAAAGTATCAATGCGTAAATCTGCTGGGTTGATGTCCGGCAGTTCTGCGTCAGGCAGTTCTGGCATTACCGCAACGGTACAAGCAGAAGTATGAATACGACCCTGCGATTCCGTAGCAGGAACACGTTGCACGCGATGACCGCCGGATTCAAATTTCAGACGACCATACACACCATCACCGCTAATTTTGGCGATGATCTCTTTATAACCACCATGTTCACCCTCGCTGGCGCTCATGATTTCTACCCGCCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1265728‑1265438‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccagcgAGGGTGAACATGGTGGTTATAAAGAGATCATCGCCAAAATTAGCGGTGATGGTGTGTATGGTCGTCTGAAATTTGAATCCGGCGGTCATCGCGTGCAACGTGTTCCTGCTACGGAATCGCAGGGTCGTATTCATACTTCTGCTTGTACCGTTGCGGTAATGCCAGAACTGCCTGACGCAGAACTGCCGGACATCAACCCAGCAGATTTACGCATTGATACTTTCCGCTCGTCAGGGGCGGGTGGTCAGCACGTTAACACCACCGATTCGGCAATTCGTATTACTC > NC_000913/1265469‑1265753 GGTGTTAACGTGCTGACCACCCGCCCCTGACGAGCGGAAAGTATCAATGCGTAAATCTGCTGGGTTGATGTCCGGCAGTTCTGCGTCAGGCAGTTCTGGCATTACCGCAACGGTACAAGCAGAAGTATGAATACGACCCTGCGATTCCGTAGCAGGAACACGTTGCACGCGATGACCGCCGGATTCAAATTTCAGACGACCATACACACCATCACCGCCAATTTTTGCGATGAACCCTTTATAACCACCATGTTCACCCTCGCTGGCGCTCATGATTTCTACCCGCCA > 1:543995/1‑288GGTGTTAACGTGCTGACCACCCGCCCCTGACGAGCGGAAAGTATCAATCCGTACATCTGCTGGGTTGCTGTCCGGCAGTTCTGCGTCAGGCAGTTATGGCATTACCGCAACGGTACAAGCAGCAGTATGAATACGACCCTGCGATTCCGTAGCAGGAACACGTTGCACGCGATGACCGCCCGATTCAAATTTCAGCCGACCATACACACCATCACCGCTAATTTTGGCGATGATCTCTTTATAACCCCCCTGTTCACCCTCGCTGGCGCTCATGATTTCTACCCGCCA > 1:1408455/1‑288 CGATTCCGTAGCAGGAACACGTTGCACGCGATGACCGCCGGATTCAAATTTCAGACGACCATACACACCATCACCGCTAATTTTGGCGATGATCTCTTTATAACCACCATGTTCACCCTCGCTGGCGCTCATGATTTCTACCCGCCAGCGAGGGTGAACATGG > 1:40443/1‑163 CGATTCCGTAGCAGGAACACGTTGCACGCGATGACCGCCGGATTCAAATTTCAGACGACCATACACACCATCACCGCTAATTTTGGCGATGATCTCTTTATAACCACCATGTTCACCCTCGCTGGCGCTCATGATTTCTACCCGCCAGCGAGGGTGAACATGG < 2:40443/163‑1 ACCATCACCGCTAATTTTGGCGATGATCTCTTTATAACCACCATGTTCACCCTCGCTGGCGGGTAGAAATCATGAGCGCCAGCGAGGGTGAACATGGTGGTTATAAAGAGATCATCGCCAAAATTAGCGGTGATGGTGTGTATGGTCGTCTGAAATTTGAATCCGGCGGTCATCGCGTGCAACGTGTTCCTGCTACGGAATCGCAGGGTCGTATTCATACTTCTGCTTGTACCGTTGCGGTAATGCCAGAACTGCC > 1:9177/1‑256 ACCATCACCGCTAATTTTGGCGATGATCTCTTTATAACCACCATGTTCACCCTCGCTGGCGGGTAGAAATCATGAGCGCCAGCGAGGGTGAACATGGTGGTTATAAAGAGATCATCGCCAAAATTAGCGGTGATGGTGTGTATGGTCGTCTGAAATTTGAATCCGGCGGTCATCGCGTGCAACGTGTTCCTGCTACGGAATCGCAGGGTCGTATTCATACTTCTGCTTGTACCGTTGCGGTAATGCCAAAACTGCC < 2:9177/256‑1 GCCAGCGAGGGTGAACATGGTGGTTATACAGAGATCATCGCCAAAATTAGCGGTGATGGTGTGTATGGTCGTCTGAAATTTGAATCCGGCGGTCATCGCGTGCAACGTGTTCCTGCTACGGAATCGCAGGGTCGTATTCATACTTCTGCTTGTACCGTTGCGGTAATGCCAGAACTGCCTGACGCAGAACTGCCGGACATCAACCCAGCAGATTTACGCATTGATACTTTCCGCTCGTCAGGGGCGGGTGGTCAGCACGTTAACACCACCGATTCGGCAATTCGTATTA < 2:636005/289‑1 CCAGCGAGGGTGAACATGGTGGTTATAAAGAGATCATCGCCAAAATTAGCGGTGATGGTGTGTATGGTCGTCTGAAATTTGAATCCGGCGGTCATCGCGTGCAACGTGTTCCTGCTACGGAATCGCAGGGTCGTATTCATACTTCTGCTTGTACCGTTGCGGTAATGCCAGAACTGCCTGACGCAGAACTGCCGGACATCAACCCAGCAGATTTTCGCATTGATACTTTCCGCTCGTCAGGGGCGGGTGGTCAG > 1:378634/1‑254 CCAGCGAGGGTGAACATGGTGGTTATAAAGAGATCATCGCCAAAATTAGCGGTGATGGTGTGTATGGTCGTCTGAAATTTGAATCCGGCGGTCATCGCGTGCAACGTGTTCCTGCTACGGAATCGCAGGGTCGTATTCATACTTCTGCTTGTACCGTTGCGGTAATGCCAGAACTGCCTGACGCAGAACTGCCGGACATCAACCCAGCAGATTTTCGCATTGATACTTTCCGCTCGTCAGGGGCGGGTGGTCAG < 2:378634/254‑1 AGCGAGGGTGAACATGGTGGTTATAAAGAGATCATCGCCAAAATTAGCGGTGATGGTGTGTATGGTCGTCTGAAATTTGAATCCGGCGGTCATCGCGTGCAACGTGTTCCTGCTACGGAATCGCAGGGTCGTATTCATACTTCTGCTTGTACCGTTGCGGTAATGCCAGAACTGCCTGACGCAGAACTGCCGGACATCAACCCAGCAGATTTACGCATTGATACTTTCCGCTCGTCAGGGGCGGGTGGTCAGCACGTTAACACCACCGATTCGGCAATTCGTATTACTC > 2:107335/1‑289 GCGAGGGTGAACATGGTGGTTATAAAGAGATCATCGCCAAAATTAGCGGTGATGGTGTGTATGGTCGTCTGAAATTTGAATCCGGCGGTCATCGCGTGCAACGTGTTCCTGCTACGGAATCGCAGGGTCGTATTCATACTTCTGCTTGTACCGTTGCGGTAATGCCAGAACTGCCTGACGCAGAACTGCCGGACATCAACCCAGCAGATTTACGCATTGATACTTTCCGCTCGTCAGGGGCGGGTGGTCAGCACGTTAACACCACCGATTCGGCAATTCGTATTACTC > 1:104427/1‑288 GGTGTTAACGTGCTGACCACCCGCCCCTGACGAGCGGAAAGTATCAATGCGTAAATCTGCTGGGTTGATGTCCGGCAGTTCTGCGTCAGGCAGTTCTGGCATTACCGCAACGGTACAAGCAGAAGTATGAATACGACCCTGCGATTCCGTAGCAGGAACACGTTGCACGCGATGACCGCCGGATTCAAATTTCAGACGACCATACACACCATCACCGCTAATTTTGGCGATGATCTCTTTATAACCACCATGTTCACCCTCGCTGGCGCTCATGATTTCTACCCGCCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1265728‑1265438‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccagcgAGGGTGAACATGGTGGTTATAAAGAGATCATCGCCAAAATTAGCGGTGATGGTGTGTATGGTCGTCTGAAATTTGAATCCGGCGGTCATCGCGTGCAACGTGTTCCTGCTACGGAATCGCAGGGTCGTATTCATACTTCTGCTTGTACCGTTGCGGTAATGCCAGAACTGCCTGACGCAGAACTGCCGGACATCAACCCAGCAGATTTACGCATTGATACTTTCCGCTCGTCAGGGGCGGGTGGTCAGCACGTTAACACCACCGATTCGGCAATTCGTATTACTC > NC_000913/1265469‑1265753 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |