New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2306058 =	143 (1.090)	4 (0.030)	4/496	NT	2.8%	coding (695/1647 nt)	mqo	malate dehydrogenase, FAD/NAD(P)‑binding domain
	?	NC_000913	2306078 =	141 (1.100)					coding (675/1647 nt)	mqo	malate dehydrogenase, FAD/NAD(P)‑binding domain

ACCGTTCCGCATATGAGCTTTGTCTGGGGCGAGGATAACGTCAATTTCCTGCGCGCCCGTTACGCCGCGTTGCAACAAAGCTCGCTGTTTCGCGGTATGCGTTACTCTGAAGATCACGCGCAGATCAAAGAGTGGGCACCGTTAGTGATGGAAGGGCGCGATCCGCAACAGAAAGTGGCAGCCACGCGTACGGAAATTGGTACCGATGTGAACTACGGCGAGATCACCCGCCAGTTAATTGCTTCCTTGCAGAAGAAATCTAACTTCTCGCTGCAACTCAGCAGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/2306344‑2306058 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagcgaGAAGTTAGATTTCTTCTGCAAGGAAGCAATTAACTGGCGGGTGATCTCGCCGTAGTTCACATCGGTACCAATTTCCGTACGCGTGGCTGCCACTTTCTGTTGCGGATCGCGCCCTTCCATCACTAACGGTGCCCACTCTTTGATCTGCGCGTGATCTTCAGAGTAACGCATACCGCGAAACAGCGAGCTTTGTTGCAACGCGGCGTAACGGGCGCGCAGGAAATTGACGTTATCCTCGCCCCAGACAAAGCTCATATGCGGAACGGTATTGATAAATGAACG  >  NC_000913/2306078‑2306359                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ACCGTTCCGCATATGAGCTTTGTCTGGGGCGAGGATAACGTCAATTTCCTGCGCGCCCGTTACGCCGCGTTGCAACAAAGCTCGCTGTTTCGCGGTATGCGTTACTCTGAAGATCACGCGCAGATCAAAGAGTGGGCACCGTTAGTGATGGAAGGGCGCGATCCGCAACAGAAAGTGGCAGCCACGCGTACGGAAATTGGTACCGATGTGAACTACGGCGAAATCACCCGCCAGTTCATTGCTTCCTTGCAGAAGAAATCCTACTTCTCGCTGCAACTCAGactcgaac                                                                                                                                                                                                                                                                                          >  1:495726/1‑281                     TGTCTGGGGCGAGGATAACGTCAATTTCCTGCGCGCCCGTTACGCCGCGTTGCAACAAAGCTCGCTGTTTCGCGGTATGCGTTACTCTGAAGATCACGCGCAGATCAAAGAGTGGGCACCGTTAGTGATGGAAGGGCGCGATCCGCAACAGAAAGTGGCAGCCACGCGTACGGAAATTGGTACCGATGTGAACTACGGCGAGATCACCCGCCAGTTAATTGATTCCTTGCAGAAGAAATCTAACTTCTCGCTGCAACTCACCAGCTGCAAGTTAGATTTCTTCTGCAAG                                                                                                                                                                                                                                                                      >  1:273951/1‑289                                                                                                                                                                                 GGCAGCCACGCGTACGGAAATTGGTACCGATGTGAACTACGGCGAGATCACCCGCCAGTTAATTGCTTCCTTGCAGAAGAAATCTAACTTCTCGCTGCTGAGTTGCAGCGAGAAGTTAGATTTCTTCTGCAAGGAAGCAATTAACTGGCGGTTGATCTCGCCGTAGTTCACATCGGTACCAATTTCCGTACGCGTGGCTGCCACTTTCTGTTGCGGATCGCGCCCTTCCATCACTAACGGTGCCCACTCTTTGATCTGCGCGTGATCTTCAGAGTAACGCATACCGCGA                                                                                                          >  2:273951/1‑289                                                                                                                                                                                                                             AGATCACCCGCCAGTTAATTGCTTCCTTGCAGAAGAAATCTAACTTCTCGCTGCTGAGTTGCAGCGAGAAGTTAGATTTCTTCTGCAAGGAAGCAATTAACTGGCGGGTGATCTCGCCGTAGTTCACATCGGTACCAATTTCCGTACGCGTGGCTGCCACTTTCTGTTGCGGATCGCGCCCTTCCATCACTAACGGTGCCCACTCTTTGATCTGCGCGTGATCTTCAGAGT                                                                                                                        <  1:638341/231‑1                                                                                                                                                                                                                             AGATCACCCGCCAGTTAATTGCTTCCTTGCAGAAGAAATCTAACTTCTCGCTGCTGAGTTGCAGCGAGAAGTTAGATTTCTTCTGCAAGGAAGCAATTAACTGGCGGGTGATCTCGCCGTAGTTCACATCGGTACCAATTTCCGTACGCGTGGCTGCCACTTTCTGTTGCGGATCGCGCCCTTCCATCACTAACGGTGCCCACTCTTTGATCTGCGCGTGATCTTCAGAGT                                                                                                                        >  2:638341/1‑231                                                                                                                                                                                                                                                                       ggccttctctgctggagtGCAGCGGGAAGTTAGATTCCTTCTGCAAGGAAGCAAGTAACTGGCGGGTGATTCCGCCGTAGTTCACATCGGTACCAATGTCCGTACGCGTGGCTGCCACTTTCTGTTGCGGATCGCGCCCATCCATCACTAACTGTGCCCACTCTTTGATCTGCGCGTGATCTTCAGAGTAACGCATACCGCGAAACAGCGAGCTTTGTTGCAACGCGGCGTAACGGGCGCGCAGGAAATTGACGTTATCCTCGCCCCAGACAAAGCTCATATGCGGAA                     <  1:927520/270‑1                                                                                                                                                                                                                                                                                         tCAGCGAGAAGGTAGATTTCTTCTGCAAGGAAGCAATTAACTGGCGGGTGATCTCGCCGTAGTTCACATCGGTACCAATTTCCGTACGCGTGGCTGCCACTTTCTGTTGCGGATCGCGCCCTTCCATCACTAACGGTGCCCACTCTTTGATCTGCGCGTGATCTTCAGAGTAACGCATACCGCGAAACAGCGAGCTTTGTTGCAACGCGGCGTAACGGGCGCGCAGGAAATTGACGTTATCCTCGCCCCAGACAAAGCTCATATGCGGAACGGTATTGATAAATGAACG  <  2:460293/288‑1                                                                                                                                                                                                                                                                                               AGAAGTTAGATTTCTTCTGCAAGGAAGCAATTAACTGGCGGGTGATCTCGCCGTAGTTCACATCGGTACCAATTTCCGTACGCGTGGCTGCCACTTTCTGTTGCGGATCGCGCCCTTCCATCACTAACGGTGCCCACTCTTTGATCTGCGCGTGATCTTCAGAGTAACGCATACCGCGAAACAGCGAGCTTTGTTGCAACGCGGCGTAACGGGCGCGCAGGAAATTGACGTTATCCTCGCCCCAGACAAAGCTCATATG                          <  1:188822/259‑1                                                                                                                                                                                                                                                                                               AGAAGTTAGATTTCTTCTGCAAGGAAGCAATTAACTGGCGGGTGATCTCGCCGTAGTTCACATCGGTACCAATTTCCGTACGCGTGGCTGCCACTTTCTGTTGCGGATCGCGCCCTTCCATCACTAACGGTGCCCACTCTTTGATCTGCGCGTGATCTTCAGAGTAACGCATACCGCGAAACAGCGAGCTTTGTTGCAACGCGGCGTAACGGGCGCGCAGGAAATTGACGTTATCCTCGCCCCAGACAAAGCTCATATG                          >  2:188822/1‑259                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ACCGTTCCGCATATGAGCTTTGTCTGGGGCGAGGATAACGTCAATTTCCTGCGCGCCCGTTACGCCGCGTTGCAACAAAGCTCGCTGTTTCGCGGTATGCGTTACTCTGAAGATCACGCGCAGATCAAAGAGTGGGCACCGTTAGTGATGGAAGGGCGCGATCCGCAACAGAAAGTGGCAGCCACGCGTACGGAAATTGGTACCGATGTGAACTACGGCGAGATCACCCGCCAGTTAATTGCTTCCTTGCAGAAGAAATCTAACTTCTCGCTGCAACTCAGCAGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/2306344‑2306058 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagcgaGAAGTTAGATTTCTTCTGCAAGGAAGCAATTAACTGGCGGGTGATCTCGCCGTAGTTCACATCGGTACCAATTTCCGTACGCGTGGCTGCCACTTTCTGTTGCGGATCGCGCCCTTCCATCACTAACGGTGCCCACTCTTTGATCTGCGCGTGATCTTCAGAGTAACGCATACCGCGAAACAGCGAGCTTTGTTGCAACGCGGCGTAACGGGCGCGCAGGAAATTGACGTTATCCTCGCCCCAGACAAAGCTCATATGCGGAACGGTATTGATAAATGAACG  >  NC_000913/2306078‑2306359

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.