| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,504,726:1 | +G | 8.0% | coding (1010/1149 nt) | insQ → | IS609 transposase B |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,504,724 | 1 | . | G | 8.0% | 188.8 / 11.1 | 50 | coding (1008/1149 nt) | insQ | IS609 transposase B |
| Reads supporting (aligned to +/- strand): ref base . (22/24); new base G (2/2); total (24/26) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.31e-01 | |||||||||||
TGAGGATTTGAAGGTCAGCAACATGTCAAAGTCAGCAGCGGGTACGGTCAGCCAGCCGGGGCGCAATGTCCGGGCAAAATCAGGTTTAAACCGTTCGATACTGGATCAGGGCTGGTATGAAATGCGCCGCCAGCTTGCGTATAAGCAGCT‑CTGGCGTGGCGGTCAGGTGCTTGCTGTTCCGCCAGCGTATACAAGCCAGCGTTGCGCGTACTGTGGT‑CATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGT‑GGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCGGGGCACGCCGTTCTTGCCTGTGGAGAGATGGTGCAGTCAGGCCGCCCGTTGAAGCAGGAACCCACCGAAATGATTCAGGCGACAGCCTGAACGTAGCAGGGATCCACGTCCTTCAGGGCGTGGAGGATGTCAATATCGGTTTCTGTCAGCGATTAAATTCAACACCACGTAACAAACGCCTCCGGCAATTAATCCCCAAAACGCAGAACCAATCCCGACCAG > NC_000913/1504454‑1504997 | tGAGGATTTGAAGGTCAGCAACATGTCAAAGTCAGCAGCGGGTACGGTCAGCCAGCCGGGGCGCAATGTCCGGGCAAAATCAGGTTTAAACCGTTCGATACTGGATCAGGGCTGGTATGAAATGCGCCGCCAGCTTGCGTATAAGCAGCT‑CTGGCGTGGCGGTCAGGTGCTTGCTGTTCCGCCAGCGTATACAAGCCAGCGTTGCGCGTACTGTGGT‑CATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGT‑GGat > 2:30949/1‑275 (MQ=255)tGAGGATTTGAAGGTCAGCAACATGTCAAAGTCAGCAGCGGGTACGGTCAGCCAGCCGGGGCGCAATGTCCGGGCAAAATCAGGTTTAAACCGTTCGATACTGGATCAGGGCTGGTATGAAATGCGCCGCCAGCTTGCGTATAAGCAGCT‑CTGGCGTGGCGGTCAGGTGCTTGCTGTTCCGCCAGCGTATACAAGCCAGAGTTGCGCGTACTGTGGT‑CGTACAGCGACAGAGAACCGCCTGTCACAAAGTAAATTCAGCAGCCCGGTATGT‑ggca > 1:172819/1‑273 (MQ=255) tttGAAGGTCAGCAACATGTCAAAGTCAGCAGCGGGTACGGTCAGCCAGCCGGGGCGCAATGTCCGGGCAAAATCAGGTTTAAACCGTTCGATACTGGATCAGGGCTGGTATGAAATGCGCCGCCAGCTTGCGTATAAGCAGCT‑CTGGCGTGGCGGTAAGGTGCTTGCTGTTCCGCCAGCGTATACAAGCCAGCGTTGCGCGTGCTGTGGT‑AATCCAGCGAAAGAGAACCGCCTGGCACAAAGTCAATTCAGATGCCCGGCATGG‑GGATATACAg > 1:410348/1‑275 (MQ=255) gggcAGCAAATTGGCAAAGCCAGAAGCGGGTACGGTCAGCCAGCCGGGGCGCAAGGTCCGGGCAAAATCAGGGTTAAACCGTTCGATACTGGATCAGGGCTGGTATGAAATGCGCCGCAAGCTTGCGTATAAGCAGCT‑CTGGCGTGGCGGTCAGGTGCTTGCTGTTCCGCCAGCGTATACAAGCCAGCGTTGCGCGTACTGTGGT‑CATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGT‑GGATATACAGCGAACg < 1:60866/272‑1 (MQ=255) ggcgcataacagggtaaacgaggcagcGGTGACGGTCGGCCAGCCTGGGGGGAAGGTCCGGGCAAAATCAGGTTTAAACCGTGCGATACTGGTTAAGGGCTGGGATGAAATGCGCCGCCAGCTGGCGTATAAGCAGCG‑CTGGCGTGGCGGTCAGGTGCTTGGTTTTCCGCCAGCTTATACAAGCCAGCGTGGCGCGTACTGTGGT‑CATACAGCGAAAGAGAACCGCCTGTTACAAAGTAAATTGAGATGCCAGGTATGT‑GGATATACAGCGAACg < 2:316811/253‑1 (MQ=255) tcagcacatggTCAAAGTCACCGCGGGGTCCCGGCAGCCCGCATGGGCGCAAGGTCCGGGCAAAATACGGTTTAAACCGTCCGATACTGGATCAGGGCTGGTATGAAATGCGCCGCCAGCTTGCGTATAAGCAGCT‑CTGGCGTGGCGGTCAGGTGCTTGCTGTTCCGCCAGCGTATACAAGCCAGCGTTGCGCGTACTGTGGT‑CATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGT‑GGATATACAGCGAACGcc < 1:161813/265‑1 (MQ=255) gTCAAAGTCAGCAGCGGGTACGGTCAGCCAGCCGGGGCGCAATGTCCGGGCAAAATCAGGTTTAAACCGTTCGATACTGGATCAGGGCTGGTATGAAATGCGCCGCCAGCTTGCGTATAAGCAGCT‑CTGGCGTGGCGGTCAGGTGCTTGCTGTTCCGCCAGCGTATACAAGCCAGCGTTGCGCGTACTGTGGT‑CATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTAAGT‑GGATATACAGCGAACGCCGATGTAAATg > 1:78639/1‑275 (MQ=255) aaGTCAGCAGCGGGTACGGTCAGCCAGCCGGGGCGCAATGTCCGGGCAAAATCAGGTTTAAACCGTTCGATACTGGATCAGGGCTGGTATGAAATGCGCCGCCAGCTTGCGTATAAGCAGCT‑CTGGCGTGGCGGTCAGGTGCTTGCTGTTCCGCCAGCGTATACAAGCCAGCGTTGCGCGTACTGTGGT‑CATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGT‑GGATATACAGCGAACGCCGATGTAAATGgc < 1:95932/273‑1 (MQ=255) agcagcGGGTACGGTCAGCCAGCCGGGGCGCAATGGCCGGGCAAAATCAGGTTTAAACCGTTCGATACTGGATCAGGGCTGGTATGAAATGCGCCGCCAGCTTGCGTATAAGCAGCT‑CTGGCGTGGCGGTCAGGTGCTTGCTGTTCCGCCAGCGTATACAAGCCAGCGTTGCGCGTACTGTGGT‑CATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGT‑GGATATACAGCGAACGCCGATGTAAATGGCGCTCGc < 1:30949/274‑1 (MQ=255) ggTCAGCCAGCCGGGGCGCAATGTCCGGGCAAAATCAGGATTAAACCGTTCGATACTGGATCAGGGCTGGTATGAAATGCGCCGCCAGCTTGCGTATAAGCAGCT‑CTGGCGTGGCGGTCAGGTGCTTGCTGTTCCGCCAGCGTATACAAGCCAGCGTTGCGCGTACTGTGGT‑CATACAGCGAAAGCGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGT‑GGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAgcgg > 1:149649/1‑275 (MQ=255) ccagccGGGGCGCAATGTCCGGGCAAAATCAGGTTTAAACCGTTCGATACTGGATCAGGGCTGGTATGAAATGCGCCGCCAGCTTGCGTATAAGCAGCT‑CTGGCGTGGCGGTCAGGTGCTTGCTGTTCCGCCAGCGTATACAAGCCAGCGTTGCGCGTACTGTGGT‑CATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGT‑GGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCgggg > 2:422180/1‑274 (MQ=255) ccGGGGAGCAATGTCCGGGCAAAATCAGGTTTAAACCGTTCGAGACTGGATCAGGGCGGGTATGAAATGCGCCGCCAGCTTGCGTATAAGCAGCT‑CTGGCGTGGCGGTCAGGTGCTTGCTGTTCCGCCAGCGTGTACAAGCCAGCGTTGCGCGTACTGTGGT‑CATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGT‑GGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCGGGGCACg < 1:501166/274‑1 (MQ=255) gcgcAAGGGCCGGGCAAAATCAGGTTTAAACCGTTCGATACTGGATCAGGGCTGGTATGAAAGGCGCCGCCAGCTTGCGTATAAGCAGCT‑CTGGCGTGGCGGTCAGGTGCTTGCTGTTCCGCCAGCGTATACAAGCCAGCGTTGCGCGTACTGTGGT‑CATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGAGGCCAGGTATGT‑GGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCGGGGCACGCCGtt < 2:149648/274‑1 (MQ=255) cGTTCGATACTGGTTCAGGGCTGTTATGAAATGCGCCGCCAGCTTGCGTATAAGCAGGT‑CTGGCGTGGCGGTCAGGTTCGTGCTGTTCCGCCAGCGTATACAAGCCAGCGTTGCGCGTACTGTGGT‑CATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGT‑GGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCGGGGCACGCCGTTCTTGCCTGTGGAGAGATGGTGCAGTCAGgccg < 1:181177/275‑1 (MQ=255) gATCAGGGCTGGTATGAAATGCGCCGCCAGCTTGCGTATAAGCAGCT‑CTGGCGTGGCGGTCAGGTGCTTGCTGTTCCGCCAGCGTATACAAGCCAGCGTTGCGCGTACTGTGGT‑CATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGTGGGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCGGGGCACGCCGTTCTTGCCTGTGGAGAGATGGTGCAGTCAGGCCGCCCGTTGAAGc > 1:377935/1‑275 (MQ=255) gATCAGGGCTGGTATGAAATGCGCCGCCAGCTTGCGTATAAGCAGCT‑CTGGCGTGGCGGTCAGGTGCTTGCTGTTCCGCCAGCGTATACAAGCCAGCGTTGCGCGTACTGTGGT‑CATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGT‑GGATATACAGCGAACGCCGATGTAAATGgcg > 1:177737/1‑199 (MQ=255) aGGGCTGGTATGAAATGCGCCGCCAGCTTGCGTATAAGCAGCT‑CTGGCGTGGCGGTCAGGTGCTTGCTGTTCCGCCAGCGTATACAAGCCAGCGTTGCGCGTACTGTGGT‑CATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGT‑GGATATACAGCGAACGCCGATGTAAATGGCGCTCg < 2:177736/199‑1 (MQ=255) gggCTGGTATGAAATGCGCCGCCAGCTTGCGTATAAGCAGCT‑CTGGCGTGGCGGTCAGGTGCTTGCTGTTCCGCCAGCGTATACAAGCCAGCGTTGCGCGTACTGTGGT‑CATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGT‑GGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCGGGGCACGCCGTTCTTGCCTGTGGAGAGATGGTGCAGTCAGGCCGCCCGTTGAAGCAGGAAc > 2:376968/1‑275 (MQ=255) tGGTAGTAAATGCGCCGCCAGCGTGCGTATAAGCAGCT‑CTGGCGTGGCGGTCAGGTGCTTTCTGTTCCGCCAGCGGATACAAGCCAGCGTTGGGCGTACTGTGGT‑CATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGT‑GGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCGGGGCACGCCGTTCTTGCCTGTGGAGAGATGGTGCAGTCAGGCCGCCCGTTGAAGCAGGAACCCAc < 1:71635/275‑1 (MQ=255) gTATGAAATGCGCCGCCAGCTTGCGTATAAGCAGCT‑CTGGCGTGGCGGTCAGGTGCTTGCTGTTCCGCCAGCGTATACAAGCCAGCGTTGCGCGTACTGTGGT‑CATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGT‑GGATAGACAGCGAACGCCGCTGTAAATGGCGCTCGCAAACTTTTAGCGGCTGGACACGACGTTCTTACCTGTGGAGAGATCGTGCCGCCATGCAGCCCGTTGAACGAGGAAccacccg > 1:436598/1‑270 (MQ=255) tATGAAATGCGCCGCCAGCTTGCGTATAAGCAGCT‑CTGGCGTGGCGGTCAGGTGCTTGCTGTTCCGCCAGCGTATACAAGCCAGCGTTGCGCGTACTGTGGT‑CATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGT‑GGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCgggg > 1:240907/1‑210 (MQ=255) tATGAAATGCGCCGCCAGCTTGCGTATAAGCAGCT‑CTGGCGTGGCGGTCAGGTGCTTGCTGTTCCGCCAGCGTATACAAGCCAGCGTTGCGCGTACTGTGGT‑CATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGT‑GGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCGGGGCACGCCGTTCTTGCCTGTGGAGAGATGGTGCAGTCAGGCCGCCCGTTGAAGCCGGAACCCACCGa > 1:521408/1‑275 (MQ=255) aaaTGCGCCGCCAGCTTGCGTATAAGCAGCT‑CTGGCGTGGCGGTCAGGTGCTTGCTGTTCCGCCAGCGTATACAAGCCAGCGTTGCGCGTACTGTGGT‑CATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGT‑GGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCGGGGCACg < 2:240906/210‑1 (MQ=255) cgccgcCAGCTTGCGTATAAGCAGCT‑CTGGCGTGGCGGTCAGGTGCTTGCTGTTCCGCCAGCGTATACAAGCCAGCGTTGCGCGTACTGTGGT‑CATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGT‑GGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCGGGGCCCGCCGGTCTTGCCTGTTGGGAGATGGTGCAGGCAGGCCGGCCGTTTAAGCCGGAACCCACCGAAATGGTTCa > 2:328001/1‑275 (MQ=255) gccgccAGCTTGCGTATAAGCAGCT‑CTGGCGTGGCGGTCAGGTGCTTGCTGTTCCGCCAGCGTATACAAGCCAGCGTTGCGCGTACTGTGGT‑CATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGT‑GGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGAGGGGCACGCCGTTCTTGCCTGTGGAGAGCTGGTGCAGTAAGGCCGCCCGTTTAAGGAGGAACCCACCGAAATGGTTCa > 2:141991/1‑274 (MQ=255) cctgcggtcGTATAAGCAGCTACTGGTG‑GGCGGTCAGGTGCTTGCGGTTCCGCCAGCGTATACAACCCAGCGTTGCGCGTACTGTGGT‑CATACAGGGAAAGAGAACCGCCTGTCACAAAGTAAATGCAGATGCCAGGTATGT‑GGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCGGGGCACGCCGTTCTTGCCTGTGGAGAGATGGTGCAGTCAGGCCGCCCGTTGAAGCAGGAACCCACCGAAATGATTCAGGCg < 1:499869/266‑1 (MQ=255) cAGCTTGCGGATAAGCAGCT‑CTGGGGTGGCGGGCAGGTGCTTGCGGTTCCGCCAGCGTATACAAGCCAGCGTTGCGCGTACTGTGGT‑CATACAGCGAAAGAGAACCGCCGGTCACAAAGTAAATTCAGATGCCAGGTATGT‑GGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCGGGGCACGCCGGTCTTGCCTGTGGAGAGATGGTGCAGTCAGGCCGCCCGTTGAAGCAGGAACCCACCGAAATGATTCAGGCGa < 2:172818/274‑1 (MQ=255) tGCGTATAAGCAGCT‑CTGGCGTGGCGGTCAGGTGCTTGCTGTTCCGCCAGCGTATACAAGCCAGCGTTGCGCGTACTGTGGT‑CATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGTGGGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCGGGGCACGCCGTTCTTGCCTGTGGAGAGATGGTGCAGTCAGGCCGCCCGTTGAAGCAGGAACCCACCGAAATGATTCAGGCGACAGcc < 2:377934/275‑1 (MQ=255) cGTATAAGCAGCT‑CTGGCGTGGCGGTCAGGTGCTTGCTGTTCCGCCAGCGTATACAAGCCAGCGTTGCGCGTACTGTGGT‑CATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGT‑GGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCGGGGCACGCCGTTCTTTCCTGTGGAGAGATGGTGCAGTCAGGCCGCCCGTTGAAGCAGGAACCCACCGCAATGATTCAGGGGACAGCCTg > 1:91280/1‑274 (MQ=255) cGTATAAGCAGCT‑CTGGCGTGGCGGTCAGGTGCTTGCTGTTCCGCCAGCGTATACAAGCCAGCGTTGCGCGTACTGTGGT‑CATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGT‑GGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCGGGGCACGCCGTTCTTGCCTGTGGAGAGATGGTGCAGTCAGGCCGCCCGGTGACGCAGGAACCCACCGAAATGATTCAGGCGACAGCCTg > 1:326628/1‑274 (MQ=255) ccgcT‑GTGGCGTGGCGGGCAGGTGCTTGCTGTTCCGCCAGCGTAGACAAGCCAGCGTTGCGCGTACTGTGGT‑CATACAGCGAAAGAGAGCCGCCTGTCACAAAGTAAATGCAGATGCCAGGTATGT‑GGGTATACAGCGAACGCCGATGTAAATGGCGCTCGTAACATTTTAGCGGCGTGGCTCGCCGTTTGTGCCTGGGGAGAGATGGTGCAGTCAGGCCGCCCGTTGAAGCAGGAACCCACCGAAATGATTCAGGCGACAGCCTGAACGTAGCa < 2:238218/273‑1 (MQ=255) gcgGTCAGGTGCTTGCTGTTCCGCCAGCGTATACAAGCCAGCGTTGCGCGTACTGTGGT‑CATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGT‑GGATATACAGCGAACGCCGATGTAAATgg > 1:465398/1‑142 (MQ=255) agcatggtcggccacgcccGCCAACTGATACAAGCCTGCGTTCGGCGGACTGTGGTACAT‑CACGGAAAGAGAGCCGCCTGTCACAAAGTAAATTCAGATGGCAGGTATGT‑GAATATACAGCGAACTCCGATGGAAATGTCGCTCGCGACAGTTTAGCGGCGGGGCACGCCGTTCTTGCCTGTGGAGGGATGGTGCAGTCAGGCCGCCCGTTGAAGCAGGAACCCACCGAAATGATGCAGGCGACAGCCTGAACGTAGCAGGGATCCACGTCCTTc < 2:410347/258‑1 (MQ=255) tCAGGTGCTTGCTGTTCCGCCAGCGTATACAAGCCAGCGTTGCGCGTACTGTGGT‑CATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGT‑GGATATACAGCGAACGCCGATGTAAATGGCGCt < 2:465397/142‑1 (MQ=255) tCAGGTGCTTGCTGTTCCGCCAGCGTATACAAGCCAGCGTTGCGCGTACTGTGGT‑CATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGT‑GGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCGGGGCACGCCGTTCTTGCCTGTGGAGAGATGGTGCAGTCAGGCCGCCCGTTGAAGCAGGAACCCACCGAAATGATTCAGGCGACAGCCTGAACGTAGCAGGGATCCACGTCCTTc < 1:422181/274‑1 (MQ=255) tCCGCCAGCGTATACAAGCCAGCGTTGCGCGTACTGTGGT‑CATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGT‑GGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCGGGGCACGCCGTTCTTGCCTGTGGAGAGATGGTGCAGTCAGGCCGCCCGTTGAAGCAGGAACCCACCGAAATGATTCAGGCGACAGCCTGAACGTAGCAGGGATCCACGTCCTTCAGGGCGTGGAGGATGt < 1:376969/275‑1 (MQ=255) gCGTATACAAGCCAGCGTTGCGCGTACTGTGGT‑CATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGTGGGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCGGGGCACGCCGTTCTTGCCTGTGGAGAGATGGTGCAGTCAGGCCGCCCGTTGAAGCAGGAACCCACCGAAATGATTCAGGCGACAGCCTGAACGTAGCAGGGAGCCACGTCCTTCAGGGCGTGGGGGAGGGAAatat > 2:502610/1‑275 (MQ=255) gTATACAAGCCAGCGTTGCGCGTACTGTGGT‑CATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGT‑GGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATCTTAGCGGCGGGGCACGCCGTTTTTGCCTGTGGAAAGATGGTGCCGTCATGCCGCCCGTTCAAGCAGGAACCCACCGAAATGATTCAGGCGACAGCCTGAACGTAGCAGGGATACACGTCCCTCAGGGCGTGGAGGAAGGCaacaac > 2:340810/1‑269 (MQ=255) aGCGTTGCGCGTACTGTGGT‑CATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGT‑GGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCGGGGCACGCCGTTCTTGCCTGTGGAGAGAGGGTGCCGTCAGGCCGCCCGCTGAACCCAGAACCCACCGAAAGAATTCATGCGACTCACCGAAAGTAGAGAGGGTCCCAGTGCTTTGGGGCGTGGGGGGTGCCAAAATCgactcagtcccgg > 2:205690/1‑263 (MQ=255) gCGGTGCGCGTACTGTGGT‑CATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGT‑GGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCGGGGCACGCCGTTCTTGCCTGTGGAGAGATGGTGCAGTCAGGCCGCCCGTTGAAGCAGGAACCCACCGAAATGATTc < 2:352172/200‑1 (MQ=255) cGTTGCGCGTACTGTGGT‑CATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGT‑GGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCGGGGCACGCCGTTCTTGCCTGTGGAAAGATGGTGCAGTCAGGACGCCCGCTGAAGCCGGAACCCACCGAAATGATTCAGGGGACAGCCAGAACCTAGCAGGGATCACCGTACTTCAGGGTGTGGGGGATGTCAATTTCGGGTTCTGTCGGCg > 2:211345/1‑274 (MQ=255) tGCGCGTACTGTGGT‑CATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGT‑GGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACGTTTTAGCGGCGGGGCACGCCGTTCTTGCCTGTGGAGAGATGGTGCAGTCAGGCCGCCCGTTGAAGCAGGAACCCACCGAAATGATTCAGGCGACAGCCTGAACGTAGCAGGGATCCACGTCCTTCAGGGCGTGGAGGATGTCAATATCGGTTTCTGTCAGCGAtt < 1:328002/274‑1 (MQ=255) tGCGCGTACGGTGGT‑CATACAGCGAAAGAGAACCGCCGGTCACAAAGTAAATTCAGTTGCCAGGTATGT‑GGATATACAGCGAAGGCCGATGGAAATGGCGCTCGCAACATTTTAGCGGCGGGGCACGCCGTTCTTGCCTGTGGAGAGATGGTGCAGTCAGGCCGCCCGTTGAAGCAGGAACCCACCGAAATGATTCAGGCGACAGCCTGAACGTAGCAGGGATCCACGTCCTTCAGGGCGTGGAGGATGTCAATATCGGTTTCTGTCAGCGAtt < 2:147380/274‑1 (MQ=255) cgcgTACTGTGGT‑CATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGT‑GGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCGGGGCACGCCGTTCTTGCCTGTGGAGAGATGGTGCAGTCAGGCCGCCCGTTGAAGCAGGAACCCACCGAAATGATTCAGGCGACAGCCTGAACGTAGCAGGGATCCACGTCCTTCAGGGCGTGGAGGATGTCAATATCGGTTTCTGTCAGc > 1:400600/1‑268 (MQ=255) cgcgTACTGTGGT‑CATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGT‑GGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCGGGGCACGCCGTTCTTGCCTGTGGAGAGATGGTGCAGTCAGGCCGCCCGTTGAAGCAGGAACCCACCGAAATGATTCAGGCGACAGCCTGAACGTAGCAGGGATCCACGTCCTTCAGGGCGTGGAGGATGTCAATATCGGTTTCTGTCAGCGATTaaa < 2:521407/275‑1 (MQ=255) tACTGTGGT‑CATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGT‑GGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCGGGGCACGCCGTTCTTGCCTGTGGAGAGATGGTGCAGTCAGGCCGCCCGTTGAAGCAGGAACCCACCGAAATGATTCAGGCGACAGCCTGAACGTAGCAGGGATCCACGTCCTTCAGGGCGTGGAGGATGTCAATATCGGTTTCTGTCAGCGAtt < 2:400599/268‑1 (MQ=255) aaaGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGT‑GGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCGGGGCACGCCGTTCTTGCCTGTgg > 2:56456/1‑119 (MQ=255) agaACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGT‑GGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCGGGGCACGCCGTTCTTGCCTGTGgagag < 1:56456/119‑1 (MQ=255) ccGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGT‑GGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCGGGGCACGCCGTTCTTGCCTGTGGAGAGATGGTGCAGTCAGGCCGCCCGTTGAAGCAGGAACCCACCGAAATGATTCAGGCGACAGCCCTAACGTAGCAGGGAACCCCGTCCTTCACGGCGGGGAGGAGGTCAATATCGGTTTCTGTCAGCGATTAAATTCAGACCCACGAAACAAACGCCTCCGCCa > 2:80738/1‑275 (MQ=255) tGCCAGGTATGT‑GGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCGGGGCACGCCGTTCTTGCCTGTGGAGAGATGGTGCAGTCAGGCCGCCCGTTGAAGCAGGAACCCACCGAAATGATTCAGGCGACAGCCTGAACGTAGCAGGGCTCCACGTCCTTCAGGGCGTGGAGGATGTCAATATCGGTTTCTGTCAGCGATTAAATTCAACACCACGTAACAAACGCCTCCGGCAATTAATCCCCAAAACGCAGAACCaa > 1:26732/1‑275 (MQ=255) cAGGGATGTGGGATATACAGCGAACGCCAGGGTAAATGGCGCTCGCAACAGTTTAGCGGCGGGGCACGCCGTTCTTGGCTGTGGAGGGATTGTGCAGGCAGGCCGCCCGTTGAAGCAGGAACCCACCGAAATGATTCAGGCGACAGCCTGAACGTAGCAGGGATCCACGTCCTTCAGGGCGTGGAGGATGTCAATATCGGTTTCTGTCAGCGATTAAATTCAACACCACGTAACAAACGCCTCCGGCAATTAATCCCCAAAACGCAGAACCAATc < 1:502611/275‑1 (MQ=255) t‑gGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCGGGGCACGCCGTTCTTGCCTGTGGAGAGATGGTTCAGTCAGGCCGCCCGTTGAAGCAGGAACCCACCGAAATGATTCAGGCGCAAGCCTGAACGTAGCAGGGCTCCACGTCCTTCCGGGCGTGGAGGATGTCACTATCGGGTTCTGTACGCCACTTAATTCAACCACACGTAACAAACGCCACCGCCAATTCATCCCCAAACCCCAAAACCAAAccccgccac > 2:360758/1‑268 (MQ=255) | TGAGGATTTGAAGGTCAGCAACATGTCAAAGTCAGCAGCGGGTACGGTCAGCCAGCCGGGGCGCAATGTCCGGGCAAAATCAGGTTTAAACCGTTCGATACTGGATCAGGGCTGGTATGAAATGCGCCGCCAGCTTGCGTATAAGCAGCT‑CTGGCGTGGCGGTCAGGTGCTTGCTGTTCCGCCAGCGTATACAAGCCAGCGTTGCGCGTACTGTGGT‑CATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGT‑GGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCGGGGCACGCCGTTCTTGCCTGTGGAGAGATGGTGCAGTCAGGCCGCCCGTTGAAGCAGGAACCCACCGAAATGATTCAGGCGACAGCCTGAACGTAGCAGGGATCCACGTCCTTCAGGGCGTGGAGGATGTCAATATCGGTTTCTGTCAGCGATTAAATTCAACACCACGTAACAAACGCCTCCGGCAATTAATCCCCAAAACGCAGAACCAATCCCGACCAG > NC_000913/1504454‑1504997 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |