New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 187727563 (1.170)3 (0.060) 3/468 NT 4.8% intergenic (+19/+3) yeaO/yoaF DUF488 family protein/DUF333 family outer membrane lipoprotein
?NC_000913 = 1877290 59 (1.130)coding (243/255 nt) yoaF DUF333 family outer membrane lipoprotein

ACCGATTTAGCCCTTGATGAGTGGGATAAAGAAATCACGCCGTCAACGGAACTGCGCAAAGCCTTTCACGGCGAAGTCGTCGATTATGCAACCTTTCGCGAGCAATATCTTGCAGAACTGGCGCAACACGAGCAAGAAGGAAAGCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTGACCCCTTGCGCTGTCTGCACTGGAATGAGCGTCCCGCCCTTCTGCTGGCAATAGACCGACGCCGGATTTGCCATACCAATCTGCGGCGGTTTAGGTGCTTCTGGCTGAGAAGGGGTTGAACAACCAGCCAGGACCAGCAAGCAAGGCAGAACAAAACTGATAATTTTCATTTATTGATCTCA  >  NC_000913/1877005‑1877544
                                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                              
aCCGATTTAGCCCTTGATGAGTGGGATAAAGAAATCACGCCGTCAACGGAACTGCGCAAAGCCTTTCACGGCGAAGTCGTCGATTATGCAACCTTTCGCGAGCAATATCTTGCAGAACTGGCGCAACACGAGCAACAAGGAACGCGGCTGGCGGCCATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCACAAAACACCACGCAGAACCATGCGCTGGTGCTGGACGACTGGCAACGTAGCTTGTGACTTTCGTACAGACTTCGGCGGtc                                                                                                                                                                                                                                                                           >  1:503098/1‑274 (MQ=255)
      ttgacccTTGATGAGTGGGAGAAAGAAAACACTCCGTAAACGGAACTGCGCAAAGCCTTTCACGGCGAAGTCTGCGATTATGCAACCTTTCGCGAGCAATATCTTGCAGAACTGGCGCAACACGAGCAAGAAGGAAAGCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTAttttt                                                                                                                                                                                                                                                                     <  2:263647/271‑1 (MQ=255)
        aGCCCTTGCTGAGTGGGATAAAGAACTCACGCCATCAACGGAACTGCGCAAAGCCTTTCACGGCGAAGTCGTCGATTATGCAACCTTTCGCGAGCAATATCTTGCAGAACTGGCGCAACACGAGCAAGAAGGAAAGCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCa                                                                                                                                                                                                                                                                   <  2:265325/275‑1 (MQ=255)
         gCCCTTGATGAGTGGGATAAAGAAATCACGCCGTCAACGGAACTGCGCAAAGCCTTTCACGGCGAAGTCGTCGATTATGCAACCTTTCGCGAGCAATATCTTGCAGAACTGGCGCAACACGAGCAAGAAGGAAAGCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCAc                                                                                                                                                                                                                                                                  <  2:332619/275‑1 (MQ=255)
                     tGGGATAAAGAAATCACGCCGTCAACGGAACTGCGCAAAGCCTTTCACGGCGAAGTCGTCGATTATGCAACCTTTCGCGAGCAATATCTTGCAGAACTGGCGCAACACGAGCAAGAAGGAAAGCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGt                                                                                                                                                                                                                                                      <  1:184803/275‑1 (MQ=255)
                       ggATAAAGAAATCACGCCGTCAACGGAACTGCGCAAAGCCTTTCACGGCGAAGTCGTCGATTATGCAACCTTTCGCGAGCAATATCTTGCAGAACTGGCGCAACACGAGCAAGAAGGAAAGCGGCTGGCGGACATCGCCCAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATTCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCGGCCGGATGGTc                                                                                                                                                                                                                                                     >  1:468463/1‑274 (MQ=255)
                        gATAAAGAAATCACGCCGTCAACGGAACTGCGCAAAGCCTTTCACGGCGAAGTCGTCGATTATGCAACCTTTCGCGAGCAATATCTTGCAGAACTGGCGCAACACGAGCAAGAAGGAAAGCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCa                                                                                                                                                                                                                                                    <  2:507894/274‑1 (MQ=255)
                         aTAAAGAAATCACGCCGTCAACGGAACTGCGCAAAGCCGTTCACGGCGAAGTCGTCGATTATGCAACCTTTCGCGAGCAATATCTTGCAGAACTGGCGCAACACGAGCAAGAAGGAAAGCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCa                                                                                                                                                                                                                                                    <  1:17540/273‑1 (MQ=255)
                           aaaGAAATCACGCCGTCAACGGAACTGCGCAAAGCCTTTCCCGGGGAAGTCGTCGATTATGCAACCTTTCGCGAGCAATATCTTGCAGAACTGGCGCAACACGAGCAAGAAGGAAAGCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAgccggatgctgtacta                                                                                                                                                                                                                                                >  1:128218‑M2/1‑259 (MQ=255)
                           aaaGAAATCACGCCGTCAACGGAACTGCGCAAAGCCTTTCACGGCGAAGTCGTCGATTATGCAACCTTTCGCGAGCAATATCTTGCAGAACTGGCGCAACACGAGCAAGAAGGAAAGCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGt                                                                                                                                                                                                                                                                            <  1:497735/247‑1 (MQ=255)
                                 aTCACGCCGTCAACGGAACTGCGCAAAGCCTTTCACGGCGAAGTCGTCGATTATGCAACCTTTCGCGAGCAATATCTTGCAGAACTGGCGCAACACGAGCAAGAAGGAAAGCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCCTCCGGCGGTTCTTTTTCACCAGCCGGATGGTCAcgccgcacca                                                                                                                                                                                                                                          >  2:193389/1‑271 (MQ=255)
                                 aTCACGCCGTCAACGGAACTGCGCAAAGCCTTTCACGGCGAAGTCGTCGATTATGCAACCTTTCGCGAGCAATATCTTGCAGAACTGGCGCAACACGAGCAAGAAGGAAAGCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCcaca                                                                                                                                                                                                                                          >  1:333983/1‑275 (MQ=255)
                                  tCACGCCGTCAACGGAACTGCGCAAAGCCTTTCACGGCGAAGTCGTCGATTATGCAACCTTTCGCGAGCAATATCTTGCAGAACTGGCGCAACACGAGCAAGAAGGAAAGCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCAACTGGCTCCGTAGCTTGTGATTTTAGTCCAGCATCCGGAGGTTATTTTCCACCAGCCGGCTGGTCACCACGCCACaa                                                                                                                                                                                                                                         >  2:234194/1‑275 (MQ=255)
                                  tCACGCCGTCAACGGAACTGCGCAAAGCCTTTCACGGCGAAGTCGTCGATTATGCAACCTTTCGCGAGCAATATCTTGCAGAACTGGCGCAACACGAGCAAGAAGGAAAGCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACCCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGGAGCTTGTGATTTTAGTACAGCATCCGGCGGGTATTTTTCACCAGCCGGATGGTCACGCCGCCACaa                                                                                                                                                                                                                                         >  2:237455/1‑275 (MQ=255)
                                  tCACGCCGTCAACGGAACTGCGCAAAGCCTTTCACGGCGAAGTCGTCGATTATGCAACCTTTCGCGAGCAATATCTTGCAGAACTGGCGCAACACGAGCAAGAAGGAAACCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCCCGCAGAACCAGTCGGCGGCTCTGGCCGACTGGCCACGAAGCCTGGCATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGACCAGCCGCCACaa                                                                                                                                                                                                                                         >  2:110832/1‑275 (MQ=255)
                                   cACGCCGTAAACGGAACGGGGCAAAGCCCTACACGGGGAAGTCGTCGATGATGCAACCGTTCGCGAGCAATAACTTGCAGAACTGGCGCAACACGAGCAAGAAGGAAAGCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACaa                                                                                                                                                                                                                                         <  2:490723/274‑1 (MQ=255)
                                        cGTCAACGGAACTGCGCAAAGCCTTTCACGGCGAAGTCGTCGATTATGCAACCTTTCGCGAGCAATATCTTGCAGAACTGGCGCAACACGAGCAAGAAGGAAAGCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCa                                                                                                                                                                                                                                   <  2:333982/275‑1 (MQ=255)
                                                    tgagcAAAGCCTTTCACGGCGAAGTCGTCGATTATGCAACCTTTCGCGAGCAATATCTTGCAGAACTGGCGCAACACGAGCAAGAAGGAAAGCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCCGAACCATTCGCTGGTGCTGGCCGACTGGCTACGTAGATTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCCGCCGGATGGTACCGCCGCCACAATGCCCATTAATCAACCg                                                                                                                                                                                                                        >  1:22028/4‑274 (MQ=255)
                                                    tGCGCAAAGCCTTTCACGGCGAAGTCGTCGATTATGCAACCTTTCGCGAGCAATATCTTGCAGAACTGGCGCAACACGAGCAAGAAGGAAAGCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTAt                                                                                                                                                                                                                                                                         >  2:341240/1‑225 (MQ=255)
                                                    tGCGCAAAGCCTTTCACGGCGAAGTCGTCGATTATGCAACCTTTCGCGAGCAATATCTTGCAGAACTGGCGCAACACGAGCAAGAAGGAAAGCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGGGATTTTGGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCCCCACAAACCCCATTCATCAATCGt                                                                                                                                                                                                                       >  2:523548/1‑275 (MQ=255)
                                                    tGCGCAAAGCCTTTCACGGCGAAGTCGTCGATTATGCAACCTTTCGCGAGCAATATCTTGCAGAACTGGCGCAACACGAGCAAGAAGGAAAGCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGACACTGCTCTACCCAGCAAAAAACACCACGCAAAACCATCAGCTGGTGCTGGCCGGCTGGCTACGGCGCTTGTGCTTTTAGTACAGCATCCGGCGGTTCTTTTTCACCAGGCGGAGAGGCACGCCGCCACAATCCCCACTCATCAACCGt                                                                                                                                                                                                                       >  2:496165/1‑275 (MQ=255)
                                                      cgcAAAGCCTTTCACGGCGAAGTCGTCGATTATGCAACCTTTCGCGAGCAATATCTTGCAGAACTGGCGCAACACGAGCAAGAAGGAAAGCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACCCCGCCACAATGCCCATTCATCAATCGttt                                                                                                                                                                                                                     >  2:125075/1‑275 (MQ=255)
                                                        cAAAGCCTTTCACGGCGAAGTCGTCGATTATGCAACCTTTCGCGAGCAATATCTTGCAGAACTGGCGCAACACGAGCAAGAAGGAAAGCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTAttttt                                                                                                                                                                                                                                                                     <  1:341241/225‑1 (MQ=255)
                                                        cAAAGCCTTTCACGGCGAAGTCGGCGATTATGCAACCTGTCGCGAGCAAGATCGTGCAGAACTGGCGCAACACGAGCAAGAAGGAAAGCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCa                                                                                                                                                                                                                   <  2:274350/275‑1 (MQ=255)
                                                           aGCCTTTCACGGCGAAGTCGTCGATTATGCAACCTTTCGCGAGCAATATCTTGCAGAACTGGCGCAACACGAGCAAGAAGGAAAGCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCg                                                                                                                                                                                                                >  2:120386/1‑275 (MQ=255)
                                                                ttCACGGCGAAGTCGTCGATTATGCAACCTTTCGCGAGCAATATCTTGCAGAACTGGCGCAACACGAGCAAGAAGGAAAGCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCCCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTCAAGCATCCGGCGGTTATTTTTCACCAGCCGGCTGGTCCCGCCGCCACAACTCCCATTCATCACTCCTTTCCCCCCCCgg                                                                                                                                                                                                           >  2:490710/1‑275 (MQ=255)
                                                                  aacgcggaggtcggcgataagcaaaCCTTTCGCGGGGAAAATCTGGCAGAACTGCGACAACCCGAGCAAGAAGGAAAGCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCGGGCCGACGGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTa                                                                                                                                                                                                         <  2:22028/252‑1 (MQ=255)
                                                                          aGTCGTCGATTATGCAACCTTTCGCGAGCAATATCTTGCAGAACTGGCGCAACACGAGCAAGAAGGAAAGCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGc                                                                                                                                                                                                   >  1:306686/1‑273 (MQ=255)
                                                                           gtcgtaGATTATGCAACCTGCCGCGAGCAATATCTTGCAGAACTGGCGAAACACGAGCAAGAAGGAAAGCGTCTGGCGGACAGCGCCACAAAACAGCCGCTCACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGTTACGTAGCTTGTGATTTTATTACAGCATCCAGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTTCAAt                                                                                                                                                                                                <  1:490711/275‑1 (MQ=255)
                                                                           gtcggcAATTATGCAACCTTTCGCGGGCAATAGCTTGCAGAACGGGCGCAACGCGAGCAAGAAGGAAAGCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAAt                                                                                                                                                                                                <  2:41627/275‑1 (MQ=255)
                                                                                  aTTATGCAACCGTACGCGAGCAATATCGTGCAGAACTGGCGCAACACTAGCAAGAAGGAAAGCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGTCCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCt                                                                                                                                                                                         <  2:119602/275‑1 (MQ=255)
                                                                                   ttATGCAACCTTTCGCGAGCAATATCTTGCAGAACTGGCGCAACACGAGCAAGAAGGAAAGCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTTCAAttgt                                                                                                                                                                                             >  1:423859/1‑270 (MQ=255)
                                                                                    tATGCAACCTTTCGCGAGCAATAGCTGGCAGAAGTGGCGCAACACGGGCAAGAAGGAAAGCGGCCTGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTTGCTACGTAGCTTGTGATTTGAGTACAGCCTCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTg                                                                                                                                                                                        <  2:510614/274‑1 (MQ=255)
                                                                                             tttCGCGAGGAATATCTTGCAGAACTGGCGCAACACGAGCAAGAAGGAAAGCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTGACCCCTTgcg                                                                                                                                                                              <  2:140050/275‑1 (MQ=255)
                                                                                                 gcgAGCAATATCTTGCAGAACTGGCGCAACACGAGCAAGAAGGCAAGCGGCTGGCTGACATCGCCAAACAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTCCAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTGACCCCTTGCGCTGt                                                                                                                                                                          <  1:385736/275‑1 (MQ=255)
                                                                                                 gcgAGCAATATCCTGCAGAACTGGCGCAACACGAGAAAGAAGGAAAGCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTGACCCCTTGCGCTGt                                                                                                                                                                          <  2:356412/275‑1 (MQ=255)
                                                                                                      cAATATCTTGCAGAACTGGCGCAACACGAGCAAGAAGGAAAGCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTGACCCCTTGCGCTGTCTGc                                                                                                                                                                      >  2:427634/1‑274 (MQ=255)
                                                                                                              tGCAGAACTGGCGCAACACGAGCAAGAAGGAAAGCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCCCCCGGTAATTTGCAATTTTTGCTGACCCCTTTCGCTTTCTGCCCTGGAATg                                                                                                                                                             >  2:505775/1‑275 (MQ=255)
                                                                                                                   aaCTGGCGCAACACGAGCAAGAAGGAAAGCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCCTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCAACGCCCGGTACTTTGCAATTGTTGCTGACCCCTTGCGCTGTCTGCACTGGAATGAg                                                                                                                                                           >  1:107471/1‑272 (MQ=255)
                                                                                                                            aaCACGAGCAAGAAGGAAAGCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTGACCCCTTGCGCTGTCTGCACTGGAATGAGCGTCCCGCCCtt                                                                                                                                               <  1:120387/275‑1 (MQ=255)
                                                                                                                                cGAGCAAGAAGGAAAGCGGCGGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTGACCCCTTGCGCTGTCTGCACTGGAATGAGCGTCCCGCCCTTctgc                                                                                                                                           <  1:424913/275‑1 (MQ=255)
                                                                                                                                                          aCATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTGACCCCTTGCGCTGTCTGCACTGGAATGAGCGTCCCGCCCTTCTGCTGGCAATAGACCGACGCCGGATTTg                                                                                                                  <  2:306685/274‑1 (MQ=255)
                                                                                                                                                                         cgCCGCTGACCCTGCCATACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTGACCCCTTGCGCTGTCTGCACTGGAATGAGCGTCCCGCCCTTCTGCTGGCAATAGACCGACGCCGGATTTGCCATACCAATCTgcgg                                                                                                  <  1:155532/274‑1 (MQ=255)
                                                                                                                                                                         ccgcgcatgcccTGCTGCACTCAACAACAAACCCCACGACGGACCATGCGCTGGTGCTGGACGACTGTCGTCGTAGCTTGTGATTTGAGTACGGGATCCGGCGGTTATTTGTCACCAGCCGGAGTGTCACGCCGCCACAATGCCCATTCATCAATCGGTTCACCGCCCGGTAATTTGCAATTGTGGCTGACCCCTTGCGCTGTCTGCACTGGAATGAGCGTCCCGCACTTCTGCTGGCAATAGACCGACGCCGGATTTGCCATACCAATCTgcg                                                                                                   <  2:312111/265‑1 (MQ=255)
                                                                                                                                                                                 aCCCGGCTCAACTCAGGAAAAAACACCACGCAGAACCATGCGCGGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAAGGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTGACCCCGTGCGCTGTCTGCACTGGAATGAGCGTCCCGCCCTTCTGCTGGCAATAGACCGACGCCGGATTTGCCATACCAATCTGCGGCGGTTTAg                                                                                          <  2:503097/275‑1 (MQ=255)
                                                                                                                                                                                        tctACTCAGAAAAAAACACCACGCAGAACCCTGCGCTGGGGCTGGCCGACTGGCTACGTGGCTTGTGATTTTGGGACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTGACCCCTTGCGCTGTCTGCACTGGAATGAGCGTCCCGCCCTTCTGCTGGCAATAGACCGACGCCGGATTTGCCATACCAATCTGCGGCGGTTTAGGTGCTTc                                                                                   <  2:107470/275‑1 (MQ=255)
                                                                                                                                                                                           aCTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAAttt                                                                                                                                                                                                     >  2:334371/1‑158 (MQ=255)
                                                                                                                                                                                           aCTCAGCAAAAAACACCACGCACACCCATGCCTTGGTGCTGGCCTTCTGGCTACGTTGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGTATGGTCACGCCCCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTGACCCCTTGCGCTGTCTGCACTGGAATGAGCGTCCCGCCCTTCTGCTGGCAATAGACCGACGCCGGATTTGCCATACCAATCTGCGGCGGTTTAGGTGCTTCTgg                                                                                <  1:237456/275‑1 (MQ=255)
                                                                                                                                                                                             tCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCggttatttttcaccagccggatgctgtactaaaatcacaagctacgtagc                                                                                                                                                                                                                              >  1:345457‑M1/1‑82 (MQ=255)
                                                                                                                                                                                               aGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCaa                                                                                                                                                                                                 <  1:334372/158‑1 (MQ=255)
                                                                                                                                                                                               aGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTGACCCCTTGCGCTGTCTGCACTGGAATGAGCGTCCCGCCCTTCTGCTGGCAATAGCCCGACGc                                                                                                                          >  2:115903/1‑229 (MQ=255)
                                                                                                                                                                                                 cAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCggttatttttcaccagccggatgctgtactaaaatcacaagctacgtagccagt                                                                                                                                                                                                                          <  2:345456‑M1/132‑55 (MQ=255)
                                                                                                                                                                                                 cAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTGACCCCTTGCGCTGTCTGCACTGGAATGAGCGTCCCGCCCTTCTGCTGGCAATAGACCGACGCCGGATTTGCCATACCAATCTGCGGCGGTTTAGGTGCTTCTGGCTgaga                                                                          <  1:427635/275‑1 (MQ=255)
                                                                                                                                                                                                   aaaaaCACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTGACCCCTTGCGCTGTCTGCACTGGAATGAGCGTCCCGCCCTTCTGCTGGCAATAGACCGACGCCGGa                                                                                                                      <  1:115904/229‑1 (MQ=255)
                                                                                                                                                                                                      aaCACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTGACCCCTTTCGCTGTCTGCCCTGGAATGAGAGCCCCGCCCTTCTGCTGTCAACATACCGACGCCGGCTTGTCCATCCCAATCTGCGGCGGTTTAGGTGTTTCTGGCCGAGGTgggg                                                                     >  2:289248/1‑275 (MQ=255)
                                                                                                                                                                                                               cagatcctggcccTGGTGCTGGCCGACTGGCTACGTAGCTTGTTATTTTAGTACAGCATCCGCCGGTTATTTTTCACCATCCGGATGGTCACGCCGCCACAATCCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTGACCCCTTGCGCTGTCTGCACTGGAATGAGCGTCCCGCCCTTCTGCTGGCAATAGACCGACGCCGGATTTGCCATACCAATCTGCGGCGGTTTAGGTGCTTCTGGCTGAGAAGGGGTTGaacaac                                                            <  1:139474/263‑1 (MQ=255)
                                                                                                                                                                                                                       tGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTGACCCCTTGCGCTGTCTGCACTGGAATGAGCGTCCCGCCCTTCTGCTGGCAATAGACCGACGCCGGATTTGCCATACCAATCTGCGGCGGTTTAGGTGCTTCTGGCTGAGAAGGGGTCGAACACCCCGCCAgg                                                    >  1:161013/1‑275 (MQ=255)
                                                                                                                                                                                                                                 cTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTGACCCCTTGCGCTGTCTGCACTGGAATGAGCGTCCCGCCCTTCTGCTGGCAATCGACCGACGCCGGATTTGCCATACCAATCTTCGGCGGTTTCGGTGCTTCTGCCGGCAAAGGGGTTGAACAACCAGCCCGGACCagcaagc                                          >  2:82620/1‑275 (MQ=255)
                                                                                                                                                                                                                                 cTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTGACCCCTTGCGCTGTCTGCACTGGAATGAGCGTCCCGCCCTTCTGCTGGCAATAGACCGACGCCGGATTTGCCATACCAATCTGCGGCGGTTTAGGTGCTTCTGGCTGAGAAGGGGTTGAACAACCAGCCAGGACCagcaagc                                          >  2:434195/1‑275 (MQ=255)
                                                                                                                                                                                                                                      ccacgggataactAGCTTGGGATTTTAGTACAGAATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCAGTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTGACCCCTTGCGCTGTCTGCACTGGAATGAGCGTCCCGCCCTTCTGCTGGCAATAGACCGACGCCGGATTTGCCATACCAATCTGCGGCGGTTTAGGTGCTTCTGGCTGAGAAGGGGTTGAACAACCAGCCAGGACCAGCAAGCAAgg                                      <  2:121650/262‑1 (MQ=255)
                                                                                                                                                                                                                                        aCTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCTGGTGAAAAATAACCccggatgctgtactaaaatcacaagctacgtagccagtcggccagcaccagcgcatggttctgcgtggtgttttttg                                                                                                                                                                                    <  2:345456‑M2/132‑78 (MQ=255)
                                                                                                                                                                                                                                            gCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCTGGTGAAAAATAACCccggatgctgtactaaaatcacaagctacgtagccagtcggccagcaccagcgcatggttctgcgtggtgttttttgctga                                                                                                                                                                                >  1:345457‑M2/1‑51 (MQ=255)
                                                                                                                                                                                                                                                      ttGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGc                                                                                                                                                                                                   >  2:126687/1‑101 (MQ=255)
                                                                                                                                                                                                                                                        gtgATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTGACCCCTTGCGCTGTCTGCACTGGAATGAGCGTCCCGCCCTTCTGCTGGCAATAGACCGACGCCGGATTTGCCATACCAATCTGCGGCGGTTTAGGTGCTTCTGGCTGAGACGGGGTTGAACAACCAGCCAGGACCAGCAAGCAAGGCAGAACAAAACTGATaa                     >  1:306974/1‑273 (MQ=255)
                                                                                                                                                                                                                                                          gATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAAtt                                                                                                                                                                                               <  1:126688/101‑1 (MQ=255)
                                                                                                                                                                                                                                                               tAGTACAGCATCCGGCtggtgaaaaataaccgccggatgctgtactaaaatcacaagctacgtagccagtcggccagcaccagcgcatggttctgcgtggtgttttttgctgagtagagcagggtcagcggctgttttttggcgatgtccgccagccgctttccttcttgctcgtgttgcgccagttctgcaagatattgctcgcgaaaggttgcataatcgacgacttccccgggaaaggctttgcgcagttccgttgacggcgtgatttcttt             >  1:128218‑M1/1‑16 (MQ=255)
                                                                                                                                                                                                                                                               tAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTGACCCCTTGCGCTGTCTGCACTGGACTGAGCGTCCCGCCCTTCTGCTGGCAATAGCCCGACGCCGGATTTGCCATACCAATCTGCGGCGGTTTAGGTGCTTCTGGCTGAGAAGGGGTTGAACAACCCGCCAGGACCAGCAAGCCAGGCCGAACAACACCGAGAATTTTCAtct            >  2:482728/1‑273 (MQ=255)
                                                                                                                                                                                                                                                               tAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTGACCCCTTGCGCTGTCTGCACTGGAATGAGCGTCCCGCCCTTCTGCTGGCAATAGACCGACGCCGGATTTGCCATACCAATCTGCGGCGGt                                                                                              >  2:203978/1‑193 (MQ=255)
                                                                                                                                                                                                                                                                   aCAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTGACCCCTTGCGCTGTCTGCACTGGAATGAGCGTCCCGCCCTTCTGCTGGCAATAGACCGACGCCGGATTTGCCATACCAATCTGCGGCGGTTTAg                                                                                          <  1:203979/193‑1 (MQ=255)
                                                                                                                                                                                                                                                                     aGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAAGTTGCAATTGTTGCTGACCCCTTGCGCTGTCTGCACTGGAATGAGCGTCCCGCCCTTCTGCTGGCAATAGACCGACGCCGGATTTGCCATACCAATCTGCGGCGGTTTAGGTGCTTCTGGCTGAGAAGGGGTTGAACAACCAGCCAGGACCAGCAAGCAAGGCAGAACAAAACTGATAATTTTCATTTATTGAt      <  1:193390/275‑1 (MQ=255)
                                                                                                                                                                                                                                                                         tCCGGGGGTTATTTTTCCCCAGCCGGATGGTCACGCCGCCCCAATGCCCATTCCTCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTGACCCCTTGCGCTGTCTGCACTGGAATGAGCGTCCCGCCCTTCTGCTGGCAATAGACCGACGCCGGATTTGCCATACCAATCTGCGGCGGTTTAGGTGCTTCTGGCTGAGAAGGGGTTGAACAACCAGCCAGGACCAGCAAGCAAGGCAGAACAAAACTGATAATTTTCATTTATTGATCTca  <  2:161012/275‑1 (MQ=255)
                                                                                                                                                                                                                                                                          ccGGCGGTTATTTTTCACCAGCCGGCTGGGCACGCCGCCACAATTCCCATTCATCACTCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTGACCCCTTGCGCTGTCTGCACTGGAATGAGCGTCCCGCCCTTCTGCTGGCAATAGACCGACGCCGGATTTGCCATACCAATCTGCGGCGGTTTAGGTGCTTCTGGCTGAGAAGGGGTTGAACAACCAGCCAGGACCAGCAAGCAAGGCAGAACAAAACTGATAATTTTCATTTATTGATCTca  <  1:505776/274‑1 (MQ=255)
                                                                                                                                                                                                                                                                          ccGGCGGTTATTTTTCACCAGCCGGAGGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTGACCCCTTGCGCTGTCTGCACTGGAATGAGCGTCCCGCCCTTCTGCTGGCAATAGACCGACGCCGGATTTGCCATACCAATCTGCGGCGGTTTAGGTGCTTCTGGCTGAGAAGGGGTTGAACAACCAGCCAGGACCAGCAAGCAAGGCAGAACAAAACTGATAATTTTCATTTATTGATCTca  <  2:468462/274‑1 (MQ=255)
                                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                              
ACCGATTTAGCCCTTGATGAGTGGGATAAAGAAATCACGCCGTCAACGGAACTGCGCAAAGCCTTTCACGGCGAAGTCGTCGATTATGCAACCTTTCGCGAGCAATATCTTGCAGAACTGGCGCAACACGAGCAAGAAGGAAAGCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTGACCCCTTGCGCTGTCTGCACTGGAATGAGCGTCCCGCCCTTCTGCTGGCAATAGACCGACGCCGGATTTGCCATACCAATCTGCGGCGGTTTAGGTGCTTCTGGCTGAGAAGGGGTTGAACAACCAGCCAGGACCAGCAAGCAAGGCAGAACAAAACTGATAATTTTCATTTATTGATCTCA  >  NC_000913/1877005‑1877544

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.