New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 306849041 (0.760)3 (0.060) 3/472 NT 7.1% coding (317/636 nt) argO arginine transporter
?NC_000913 = 3068684 38 (0.720)coding (123/636 nt) argO arginine transporter

AACAAAAGTATCCAGGTAAACATGCGGATTCAGCCAGGTCACTGCCAACATGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCTGGCTAACTCAATATTACTGCTCATTGCTGTTTTAAAAGCGCCAAAACCATACCACAGCAAGAAGGCTACGCCGCCCCAGGTGACCAGCGCCAGCAACCACGGCGACTGCATCAATAACGCGCTGCCACCAAAAATCCCGGCGCAAATCAGGACCAAATCGCTGATAGCACAAAGTAAGGCAATCATAATGTGGTACTGACGACGTATGCCCTGATTCATCACAAAAGCATTTTGTGGACCGAGCGGTAGGATCATAGCCGCCCCAAGTGCAAGACCTTGAAAGTAATAAGAAAACACGTTGGATATTCCGAATTAAGTATCTGATGCAGAGACTATATCGCGGGATTGTTATTAGCGGAAATTGATAATATTAATTGGCAATCAGAAAAACTAATAAGAGAGAGGCCAGAGAGTATTATCTGGCCTCAGCGTTGATTACGCAGCT  >  NC_000913/3068414‑3068954
                                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                               
aacaaAAGTAGCCAGGTAAACAGGCGGATTCAGCCGAGTCACTGCCAACATGGGGGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCTGGCTAACTCAATATTACTGCTCATTGCTGTTTTAAAAGCGCCAAAACCATACCACAGCAAGAAGGCTACGCCGCCCCAGGTGACCAGCGCCAGCAACCACGGCGACTGCATCAATAACGCGCTGCCACCAAAAATCCCGGCGCAAATCAGGACCAAATCGCTGATAGCACAAAGTaagg                                                                                                                                                                                                                                                                             >  2:86317‑M2/1‑271 (MQ=255)
   aaaaGTATCCAGGTAAACATGCGGATTCAGCCAGGTCACTGCCAACATGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCTGGCTAACTCAATATTACTGCTCATTGCTGTTTTAAAAGCGCCAAAACCATACCACAGCAAGAAGGCTACGCCGCCCCAGGTGACCAGCGCCAGCAACCACGGCGACTGCATCAATAACGCGCTGCCACCAAAAATCCCGGCGCAAATCAGGACCAAATCGCTGATAGCACAAAGTaaggc                                                                                                                                                                                                                                                                            >  1:505114‑M2/1‑268 (MQ=255)
          tCCAGGTAAACATGCGGATTCAGCCAGGTCACTGCCAACATGGTTGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCGGCTCTGGCTAACTCAATATTACTGCTCATTGCTGTTTTAAAAGCTCCAAAACCATACACCAGCAAGAAGGCTCCGCCTCCCCAGGTGACCAGCGCCAGCAACCACGGCTACTGCATCCATAACTCGCTGCCACCAAACATCCCGGCGCAACTCAGGACCAACTGGATTAAAGCACAAAGTAAGGCAATCATaaa                                                                                                                                                                                                                                                                   >  1:41971/1‑274 (MQ=255)
          tCCAGGTAAACATGCGGATTCAGCCAGGTCACTGCCAACATGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCTGGCTAACTCAATATTACTGCTCATTGCTGTTTTAAAAGCGCCAAAACCATACCACAGCAAGAAGGCTACGCCGCCCCAGGTGACCAGCGCCAGCAACCACGGCGACTGCATCAATAACGCGCTGCCACCAAAAATCCCGGCGCAAATCAGGACCAAATCGCTGATAGCACAAAGTAAGGCAATCATAAt                                                                                                                                                                                                                                                                   >  1:355278/1‑275 (MQ=255)
            cAGGTAAACATGCGAATTCAGCCAGGTCACTGCCAACAGGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCTGGCTAACTCAATATTACTGCTCATTGCTGTTTAAAAAGCGCCAAAACCATACCACAGCAAGAAGGCTACGCAGCCCCAGGTGACCAGCGCCAGCAACCACGGCGACTGCATCAATAACGCGCTGCCACCAAAAATCCCGGCGCAAATCAGGACCAAATCGCTGATAGCACAAAGTAAGGCAATCATAAt                                                                                                                                                                                                                                                                   <  1:393893/273‑1 (MQ=255)
                                gCCAGGTCACTGCCAACATGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCTGGCTAACTCAATATTACTGCTCATTGCTGTTTTAAAAGCGCCAAAACCATACCACAGCAAGAAGGCTACGCCGCCCCAGGTGACCAGCGCCAGCAACCACGGCGACTGCATCAATAACGCGCTGCCACCAAAAATCCCTGCGCAAATCAGGACCAAATCGCTGATAGCACAAAGTAAGGCAATCATAATGTGGTACTGACGACGTATGccc                                                                                                                                                                                                                                             <  2:355277/275‑1 (MQ=255)
                                          tGCCAACAGGGTGGCGATAATGTTACAGCTGCCGTGCTTCAGGACAACGGCGATGGGTAACGCAATATGACTGCACATTGCTGGTTTAAAAGCGCCAAAACCATGCCCCAGCAAGAAGGCTACGCCGCCCCAGGTGACCAGCGCCAGCAACCACTGCGACTGCATCAATAACGCGCTGCCACCAAAAATCCCGGCGCAAATCAGGACCAAATCGCTGATAGCACAAAGTAAGGCAATCATAATGGGGTACTGACGACGTATGCCCTGATtcatca                                                                                                                                                                                                                                   <  2:64980/275‑1 (MQ=255)
                                                cATGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCTGGCTAACTCAATATTCCTGCTCATTGCTGTTTTAAAAGCGCCAAAACCATACCACAGCAAGAAGGCTACGCCGCCCCAGGTGACCAGCGCCAGCAACCACGGCGACTGCATCAATAACGCGCTGCCACCAAAAATCCCGGCGCAAATCAGGACCAAATCGCTGATAGCACAAAGTAAGGCAATCATAATGTGGTACTGACGACGTATGCCCTGATTCATCACaa                                                                                                                                                                                                                                <  1:171082/272‑1 (MQ=255)
                                                          aTAATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCTGGCTAACTCAATATTACTGCTCATTGCTGTTTTAAAAGCGCCAAAACCATACCACAGCAAGAAGGCTACGCCGCCCCAGGTGACCAGCGCCAGCAACCACGGCGACTGCATCAATAACGCGCTGCCACCAAAAATCCCGGCGCAAATCAGGACCAAATCGCTGATAGCACAAAGTAAGGCAATCATAATGTGGTACTGACGACGTATGCCCTGATTCACCACAAAAGCATTTTGTgg                                                                                                                                                                                                                   >  1:348740/1‑275 (MQ=255)
                                                                 tCCATCTGCCTTGCTTCATGACTTCGGCGCTGGCTAACTCAATATTACTGCTCATTGCTGTTTTAAAAGCGCCAAAACCCTACCACAGCAAGAAGGCTACGCCGCCCCAGGTGACCAGCGCCAGCAACCACGGCGACTGCATCAATAACGCGCTGCCACCAAAAATCCCGGCGCAAATCAGGACCAAATCGCTGATAGCACAAAGTAAGGCAATCATAATGTGGTACTGACGACGTATGCCCTGATTCATCACAAAAGCATTTTGTGGACCGAGc                                                                                                                                                                                                            <  1:384113/275‑1 (MQ=255)
                                                                                   tGACTTCGGCGCTGGCTAACTCAATATTACTGCTCATTGCTGTTTTAAAAGCGCCAAAACCATACCACAGCAAGAAGGCTACGCCGCCCCAGGTGACCAGCGCCAGCAACCACGGCGACTGCATCAATAACGCGCTGCCACCAAAAATCCCGGCGCAAATCAGGACCAAATCGCTGATAGCACAAAGTAAGGCAATCATAATGTGGTACTGACGACGTATGCCCTGATTCATCACAAAAGCATTCTGTGGACCGAGCGGTAGGCTCATcgccgc                                                                                                                                                                                           >  2:90240/1‑274 (MQ=255)
                                                                                   agagacaggCGCTGGCTAACTCAAAATTCCTGCTCATTGCTGTTTTAAAAGCGCCAAAACCATACCACAGCAAGCAGGCTACGCCGCCCCAGGTGACCAGCGCCAGCAACCACGGCGACTGCATCAATAACGCGCTGCCACCAAAAATCCCGGCGCAAATCAGGACCAAATCGCTGATAGCACAAAGTAAGGCAATCATAATGTGGTACTGACGACGTATGCCCTGATTCATCACAAAAGCATTTTGTGGACCGAGCGGTAGGATCATAgccgcc                                                                                                                                                                                         <  1:343342/268‑1 (MQ=255)
                                                                                             gcgtgCTAAATCAATATTACTGCTCATTGCGGTTTTAAAAGCGCCAAAACCATACCACAGCAAGAAGGCTACGCCGCCCCAGGTGACCAGCGCCAGCAACCACGGCGACTGCATCAATAACGCGCTGCCACCAAAAATCCCGGCGCAAATCAGGACCAAATCGCTGATAGCACAAAGTAAGGCAATCATAATGTGGTACTGACGACGTATGCCCTGATTCATCACAAAAGCATTTTGTGGACCGAGCGGTAGGATCATAGCCGCCCCAAGTGCa                                                                                                                                                                                <  1:515479/270‑1 (MQ=255)
                                                                                                      cTCAATATTACTGCTCATTGCTGTTTTAAAAGCGCCAAAACCATACCACAGCAAGAAGGCTACGCCGCCCCAGGTGACCAGCGCCAGCAACCACGGCGACTGCATCAATAACGCGCTGCCACCAAAAATCCCGGCGCAAATCAGGACCAAATCGCTGATAGCACAAAGTAAGGCAATCATAATGTGGTACTGACGACGTATGCCCTGATTCATCACAAAAGCATTTTGTGGACCGAGCGGTAGGATCATAgc                                                                                                                                                                                              >  2:343341/1‑252 (MQ=255)
                                                                                                           tatTACTGCTCATTGCTGTTTTAAAAGCGCCAAAACCATACCACAGCAAGAAGGCTACGCCGCCCCAGGTGACCAGCGCCAGCAACCACGGCGACTGCATCAATAACGCGCTGCCACCACAAATCCCGGCGCAAATCAGGACCAAATCGCTGATAGCACAAAGTAAGGCAATCATAATGTGGTACTGACGACGTATGCCCTGATTCATCACAAAAGCATTTTGTGGACCGAGCGGTAGGATCATAGCCGCCCCAAGTGCAAGACCTTGAAAGtaa                                                                                                                                                                 >  2:237574/1‑275 (MQ=255)
                                                                                                           tatTACTGCTCATTGCTGTTTTAAAAGCGCCAAAACCATACCACAGCAAGAAGGCTACGCCGCCCCAGGTGACCAGCGCCAGCAACCACGGCGACTGCATCAATAACGCGCTGCCACCAAAAATCCCGGCGCAAATCAGGACCAAATCGCTGATAGCACAAAGTaaggcagatggaaaattatcgccaccatgttggcagtgacctggctgaatccgcatgtttacctggatacttttgttgtactgggcagccttggcgggca                                                                                                                                                                             <  1:69302‑M2/264‑101 (MQ=255)
                                                                                                               aCTGCTCATTGCTGTTTTAAAAGCGCCAAAACCATACCACAGCAAGAAGGCTACGCCGCCCCAGGTGACCAGCGCCAGCAACCACGGCGACTGCATCAATAACGCGCTGCCACCAAAAATCCCGGCGCAAATCAGGACCAAATCGCTGATAGCACAAAGTaaggcagatggaaaattatcgccaccatgttggcagtgacctggctgaatccgcatgtttacctggatacttttgttgtactgggcagccttggcgggcaactt                                                                                                                                                                         >  2:69301‑M2/1‑160 (MQ=255)
                                                                                                                cTGCTCATTGCTGTTTTAAAAGCGCCAAAACCATACCACAGCAAGAAGGCTACGCCGCCCCAGGTGACCAGCGCCAGCAACCACGGCGACTGCATCAATAACGCGCTGCCACCAAAAATCCCGGCGCAAATCAGGACCAAATCGCTGATAGCACAAAGTAAGGCAATCATAATGTGGTACTGACGACGTATGCCCTGATTCATCACAAAAGCATTTTGTGGACCGAGCGGTAGGGTCATAGCCGCCCCAAGTGCAAGACCTTGAAAGTAATAAGa                                                                                                                                                            >  2:195329/1‑275 (MQ=255)
                                                                                                                   cTCATTGCTGTTTTAAAAGCGCCAAAACCATACCACAGCAAGAATGCTACGCCGACCCAGGTGACCAGCGCCAGCAACCACGGCGACTGCATCAATAACGCGCTGCCACCAAAAATCCCGACGCAAATACGGACGAAATCGCTGATAGCACAAAGTAAGGCAAACATAATGTGGTACTGACAACGTATGCCCTGATTCATCACACAAGCATTTTGGGGAGCGGGCGATAGGAAACAACCGCGCCCAAGTCACAGCCCGTGGAAGTAATAAGaaaa                                                                                                                                                         >  2:18789/1‑275 (MQ=255)
                                                                                                                       ttGCTGGTTTAAAAGCGCCAAAACCATACCACGGCAAGAAGGCTACGCCGCCCCAGGTGACCAACGCCAGCAACCACGGCGACTGCATCAATGACGCGCTGCCACCAAAAATCCCGGCGCAAATCAGGACCAAATCGCTGATAGCACAAAGTAAGGCAATCATAATGTGGTACTGACGACGTATGCCCTGATTCATCACAAAAGCATTTTGTGGACCGAGCGGTAGGATCATAGCCGCCCCAAGTGCAAGACCTTGAAAGTAATAAGAAAACACg                                                                                                                                                     <  1:110511/275‑1 (MQ=255)
                                                                                                                        tGCTGTTTTAAAAGCGCCAAAACCATACCACAGCAAGAAGGCTACGCCGCCCCAGGTGACCAGCGCCAGCAACCACGGCGACTGCATCAATAACGCGCTGCCACCAAAAATCCCGGCGCAAATCAGGACCAAATCGCTGATAGCACAAAGTAAGGCAATCATAATGTGGTACTGACGACGTATGCCCTGATTCATCACAAAAGCATTTTGTGGACCGAGCGGTAGGATCATAGCCGCCCCAAGTGCAAGACCTTGAACGTAATAAGAAAACACGt                                                                                                                                                    >  1:293840/1‑275 (MQ=255)
                                                                                                                               ttAAAAGCGCCAAAACCATACCACAGCAAGAAGGCTACGCCGCCCCAGGTGACCAGCGCCAGCAACCACGGCGACTGCATCAATAACGCGCTGCCACCAAAAATCCCGGCGCAAATCAGGACCAAATCGCTGATAGCACAAAGTAAGGCAATCATAATGTGGTACTGACGACGTATGCCCTGATTCATCACAAAAGCATTTTGTGGACCGAGCGGTAGGATCATAGCCGCCCCAAGTGCAAGACCTTGAAAGTAATAAGAAAACACGTTGGata                                                                                                                                              >  2:34804/1‑274 (MQ=255)
                                                                                                                                   aaGCGCCAAAACCATACCACAGCAAGAAGGCTACGCCGCCCCAGGTGACCAGCGCCAGCAACCACGGCGACTGCATCAATAACGCGCTGCCACCAAAAATCCCGGCGCAAATCAGGACCAAATCGCTGATAGCACAAAGTAAGGCAATCATAATGTGGTACTGACGACGTATGCCCTGATTCATCACAAAAGCATTTTGTGGACCGAGCGGTAGGATCATAGCCGCCCCAAGTGCAAGACCTTGAAAGTAATAAGAAAACACGTTGGATATTCCg                                                                                                                                         <  1:34804/275‑1 (MQ=255)
                                                                                                                                                       atcAAGAAGGGTACGCAGCGCCACGGGAGCAGCGCCAGGAACCACTGCGACTGCATAAATAACTCGCTGCCACCAAAATACCCGGGGAAAATCAGGACCAAATCCCTGATAGCACAAAGTAGGGCAATCAGAATGTGGTACTGACGACGTAGGCCCTGATTCATCACAGAAGCATTTTGTGGACCGAGCGGTAAGATCATAGCCGCCCAAAGTGCAAGACATTGAAAGTAATAAGAAAACACGTTGGATATTCCGAATTAAGTAGCTGATGCaga                                                                                                                     <  2:41971/273‑1 (MQ=255)
                                                                                                                                                        gCAAGAAGGCTACGCCGCCCCAGGTGACCAGCGCCAGCAACCACGGCGACTGCATCAATAACGCGCTGCCACCAAAAATCCCGGCGCAAATCAGGACCAAATCGCTGATAGCACAAAGTAAGGCAATCATAATGTGGTACTGACGACGTATGCCCTGATTCATCACAAAAGCATTTTGTGGACCGAGCGGTAGGATCATAgccg                                                                                                                                                                                            >  1:25592/1‑204 (MQ=255)
                                                                                                                                                            gaagGCTACGCCGCCCCAGGTGACCAGCGCCAGCAACCACGGCGACTGCATCAATAACGCGCTGCCACCAAAAATCCCGGCGCAAATCAGGACCAAATCGCTGATAGCACAAAGTAAGGCAATCATAATGTGGTACTGACGACGTATGCCCTGATTCATCACAAAAGCATTTTGTGGACCGAGCGGTAGGATCATAGCCGcccc                                                                                                                                                                                       <  2:25592/204‑1 (MQ=255)
                                                                                                                                                              agGCTACGCCGCCCCAGGTGACCAGCGCCAGCAACCACGGCGACTGCATCAATAACGCGCTGCCACCAAAAATCCCGGCGCAAATCAGGACCAAATCGCTGATAGCACAAAGTAAGGCAATCATAATGTGGTACTGACGACGTATGCCCTGATTCATCAAAAAACCATTTTGTGGACCGGGCGGTAGGATCATAGCCGACCCCACTGAAAGACCTTGAAAGTAATAAGAAAAAACGTTGGATATTCCGAATGAAGTCTCTGATGCAGAGCCtata                                                                                                              >  1:276570/1‑275 (MQ=255)
                                                                                                                                                                 gcaCGCCGCCCCAGGTGACCAGCGCCAGCAACCACGGCGACTGCATCAATAACGGGCTGCCACCAAGAATCCCGGCGCAAATCGGGACCAAATCGCTGATAGCACAAAGTAAGGCAATCATAATGTGGTACTGACGACGTATGCCCTGATTCATCACAAAAGCATTTTGTGGACCGAGCGGTAGGATCATAGCGGCCCCAAGTGCAAGACCTTGAAAGTAATAAGAAAACACGTTGGATATTCCGAATTAAGTATCTGATGCAGAGACTATATcg                                                                                                           <  2:249274/273‑1 (MQ=255)
                                                                                                                                                                 cTACGCCGCCCCAGGTGACCAGCGCCAGCAACCACGGCGACTGCATCAATAACGCGCTGCCACCAAAAATCCCGGCGCAAATCAGGACCAAATCGCTGATAGCACAAAGTAAGGCAATCATAATGTGGTACTGACGACGTATGCCCTGATTCATCACAAAAGCATTTTGTGGACCGAGCGGTAGGATCATAGCCGCCCCAAGTGCAAGACCTTGAAAGTAATAAGAAAACACGTTGGATATTCCGAATTAAGTATCTGATGCAGAGAcaaactac                                                                                                           >  2:155064/1‑268 (MQ=255)
                                                                                                                                                                 cTACGCCGCCCCAGGTGACCAGCGCCAGCAACCACGGCGACTGCATCAATAACGCGCTGCCACCAAAAATCCCGGCGCAAATCAGGACCAAATCGCTGATAGCACAAAGTAAGGCAATCATAATGTGGTACTGACGACGTATGCCCTGATTCATCACAAAAGCATTTTGTGGACCGAGCGGTAGGATCATAGCCGCCCCAAGTGCAAGACCTTGAAAGTAATAAGAAAACACGTTGGATATTCCGAATTAAGTATCTGATGCAGAGACTATATcg                                                                                                           <  1:357160/275‑1 (MQ=255)
                                                                                                                                                                        gccCCAGGTGACCCGCGACAGCAACCCCGGCGACTGCATCAATAACGCGCTGCCACCAAAAATCCCGGCGCAAATCAGGACCAAATCGCTGATAGCACAAAGTAAGGCAATCATAATGTGGTACTGACGACGTATGCCCTGATTCATCACAAAAGCATTTTGTGGACCGAGCGGTAGGATCATAGCCGCCCCAAGTGCAAGACCTTGAAAGTAATAAGAAAACACGTTGGATATTCCGAATTAAGTATCTGATGCAGAGACTATATCGCGGGa                                                                                                      <  2:348739/273‑1 (MQ=255)
                                                                                                                                                                                                           gCATCAATAACGCGCTGCCACCAAAAATCCCGGCGCAAATCAGGACCAAATCGCTGATAGCACAAAGTAAGGCAATCATAATGTGGTACTGACGACGTATGCCCTGATTCATCACAAAAGCATTTTGTGGACCGAGCGGTAGGATCATAGCCGCCCCAAGTGCAAGACCTTGAAAGTAATAAGAAAACACGTTGGATATTCCGAATTAAGTATCTGATGCAGAGACTATATCGCGGGATTGTTATTAGCGGAAATTGATAATATTAATTGGCAAt                                                                 >  1:263672/1‑275 (MQ=255)
                                                                                                                                                                                                             aTCAATAACGCGCTGCCACCAAAAATCCCGGCGCAAATCAGGACCAAATCGCTGATAGCACAAAGTAAGGCAATCATAATGTGGTACTGACGACGTATGCCCTGATTCATCACAAAAGCATTTTGTGGACCGAGCGGTAGGATCATAGCCGCCCCAAGTGCAAGACCTTGAAAGTAATAAGAAAACACGTTGGATATTCCGAATTAAGTATCTGATGCAGAGACTATATCGCGGGATTGTTATTAGCGGAAATTGATAATATTAATTGGCAAGCa                                                               >  2:223724/1‑275 (MQ=255)
                                                                                                                                                                                                                               gcaAAAATCCCGGCGCAAATCAAAGACAAATCGCTGATAGCACAAAGTTATGCAAGCATAATGTGGTACTGACGACGTATGCCCTGATTCATCACAAAAGCATTGTGTGGACCGAGCGGTAGGATCAAAGCCGCCCCAAGTGCAATACCTTGAAAGTAATAAGAAAACACGTTGGATATTCCGAATTAAGTAGCTGATGCAGAGACTATATCGCGGGATTGTTATTAGCGGAAATTGATAATATTAATTGGCAATCAGAAAAACTAATAagagag                                             <  1:509616/274‑1 (MQ=255)
                                                                                                                                                                                                                                      tCCCGGCGCAAATCAGGACCAAATCGCTGATAGCACAAAGTAAGGCAATCATAATGTGGTACTGACGACGTATGCCCTGATTCATCACAAAAGCATTTTGTGGACCGAGCGGTAGGATCATAGACGCCCAAAGTGCACGACCTTGAAAGTAATAAGAAAACACGTTGGATATTCCGAATTCAGTATCTGATGAAGAGACTATATCGAGGGATTGTTAGTAGCGGAAATTGATAATATTAAGTGGCAATCAGAAAAACTAATAAGAGAGAGGCCa                                       >  1:277611/1‑274 (MQ=255)
                                                                                                                                                                                                                                      tCCCAGCGTAAACCAGGACCAAATCGCTGATAGCACAAAGTAAGGCAATCATAATGTGGTACTGCAGAACTATGCCCTGATTCAGCACAAAAGCATTTTGTGGACCGAGCGGTAGGTTCATAGCCGCCCCAAGTGCAAGACCTTGAAAGTAATAAGAAAACACTTTGGATATTCCGAATTAAGTATCTGATGCAGAGACTATATCGCGGGATTGTTATTAGCGGAAATTGATAATATTAATTGGCAATCAGAAAAACTAATAAGAGAGAGGCCag                                      <  1:472649/275‑1 (MQ=255)
                                                                                                                                                                                                                                       cccGGCGCAAATCAGGACCAAATCGCTGATAGCACAAAGTAAGGCAATCAGTATGTGGTACTGACTACGTATGCCATGATTCATCACAAAAGCATTTTGTGGACCGAGCGGTAGGATCATAGCCGCCCCAAGTGCAAGACCTTCAAAGTAATAAGCAAACACGTTGGATATTCCGAATTAAGTATCTGATGCAGAGACGATATCGCGGGATTGTTATTAGCGGAAATTGATAATATTAATTGGCAATCAGAAAAACTAATAAGAGAGAGGCCaga                                     <  1:18789/275‑1 (MQ=255)
                                                                                                                                                                                                                                                           aaTCGCTGATAGCACAAAGTAAGGCAATCATAATGTGGTACTGACGACGTATGCCCTGATTCATCACAAAAGCATTTTGTGGACCGAGCGGTAGGATCATAGCCGCCCCAAGTGCAAGACCTTGAAAGTAATAAGAAAACACGTTGGATATTCCGAATTAAGTATCTGATGCAGAGACTATATCGCGGGATTGTTATTAGCGGAAATTGATAATATTAATTGGCAATCAGAAAAACTAATAAGAGAGAGGCCAGAGAGTATTATCTGGCCTCAGc                 >  2:99087/1‑275 (MQ=255)
                                                                                                                                                                                                                                                             actcgtaTAGCCTAAAGTAAGACATTCAGAATGTGGTACTAACGACGTATGCCCTTATTCATCACAAAAGCATTTTGTGGACCGAGCGGTAGGGTCATAGCCGCCCCAAGTGCAAGACCTTGAAAGGAATAAGAAAACACGTTGGATATTCCGAATTAAATATCGGATGCAGAGACTATATCGCGGGATTGTTATTAGCGGAAAGTGATAATATTAATTGGCAATCAGAAAAACTAATAAGAGAGAGGCCAGAGAGTATTATCTGGCCTCAGCGt               <  2:145042/269‑1 (MQ=255)
                                                                                                                                                                                                                                                                cTGATAGCACAAAGTaaggcagatggaaaattatcgccaccatgttggcagtgacctggctgaatccgcatgtttacctggatacttttgttgtactgggcagccttggcgggcaacttgatgtggaaccaaaacgctggtttgcactcgggacaattagcgcctctttcctgtggttctttggtctggctcttctcgcagcctggctggcaccgcgtctgcgcacggcaaaagcacagcgcattatcaatctggttgtgggatgtgttatgtgg             <  1:141953‑M2/275‑261 (MQ=255)
                                                                                                                                                                                                                                                                cTGATAGCACAAAGTAAGGCAATCATAATGTGGTACTGACGACGTATGCCCTGATTCATCACAAAAGCATTTTGTGGACCGAGCGGTAGGATCATAgccg                                                                                                                                                                                            >  2:467243/1‑100 (MQ=255)
                                                                                                                                                                                                                                                                    tAGCACAAAGTAAGGCAATCATAATGTGGTACTGACGACGTATGCCCTGATTCATCACAAAAGCATTTTGTGGACCGAGCGGTAGGATCATAGCCGcccc                                                                                                                                                                                       <  1:467244/100‑1 (MQ=255)
                                                                                                                                                                                                                                                                    aagaaaaaaGTAAGGCAATCATAATGGGGTAATGACGACGTAAGCCCTGATTCATCACAAAAGCATTTTGTGAACCGGGCGGTAGGATCATAGCCGCCCCAAGTGCAAGACCTTGAAAGTAATAAGAAAACACGTTGGATATTCCGAATTAAGTATCTGATGCAGAGACTATATCGCGGGATTGTTATTAGCGGAAATTGATAATATTAATTGGCAATCAGAAAAACTAATAAGAGAGAGGCCAGAGAGTATTATCTGGCCTCAGCGTTGATTa         <  2:204187/268‑1 (MQ=255)
                                                                                                                                                                                                                                                                       cacaAAGTAAGGCAATCATAATGTGGTACTGACGACGTATGCCCTGATTCATCACAAAAGCATTTTGTGGACCGAGCGGTAGGATCATAGCCGCCCCAAGTGCAAGACCTTGAAAGTAATAAGAAAACACGTTGGATATTCCGAATTAAGTATCTGATGCAGAGACTATATCGCGGGATTGTTATTAGCGGAAATTGATAATATTAATTGGCAATCAGAAAAACTAATAAGAGAGAGGCCAGAGAGTATTATCTGGCCTCAGCGTTGATTACGc      >  1:141686/1‑274 (MQ=255)
                                                                                                                                                                                                                                                                          aaaGTAAGGCAATCATAATGTGGTACTGACGACGGATGCCCTGATTCATCACAAAAGCATTTTGTGGACCGAGCGGTAGGATCATAGCCGCCCCAAGTGCAAGACCTTGAAAGTAATAAGAAAACACGTTGGATATTCCGAATTAAGTATCTGATGCAGAGACTATATCGCGGGATTGTTATTAGCGGAAATTGATAATATTAATTGGCAATCAGAAAAACTAATAAGAGAGAGGCCAGAGAGTATTATCTGGCCTCAGCGTTGATTACGCAGCt  <  1:381670/275‑1 (MQ=255)
                                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                               
AACAAAAGTATCCAGGTAAACATGCGGATTCAGCCAGGTCACTGCCAACATGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCTGGCTAACTCAATATTACTGCTCATTGCTGTTTTAAAAGCGCCAAAACCATACCACAGCAAGAAGGCTACGCCGCCCCAGGTGACCAGCGCCAGCAACCACGGCGACTGCATCAATAACGCGCTGCCACCAAAAATCCCGGCGCAAATCAGGACCAAATCGCTGATAGCACAAAGTAAGGCAATCATAATGTGGTACTGACGACGTATGCCCTGATTCATCACAAAAGCATTTTGTGGACCGAGCGGTAGGATCATAGCCGCCCCAAGTGCAAGACCTTGAAAGTAATAAGAAAACACGTTGGATATTCCGAATTAAGTATCTGATGCAGAGACTATATCGCGGGATTGTTATTAGCGGAAATTGATAATATTAATTGGCAATCAGAAAAACTAATAAGAGAGAGGCCAGAGAGTATTATCTGGCCTCAGCGTTGATTACGCAGCT  >  NC_000913/3068414‑3068954

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.