| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1979489 | 4 (0.060) | 128 (1.860) | 61/284 | 0.1 | 97.0% | intergenic (‑274/‑264) | insA/uspC | IS1 repressor TnpA/universal stress protein |
| ? | NC_000913 | = 2290111 | NA (NA) | intergenic (‑32/+1) | insH1/yejO | IS5 transposase and trans‑activator/pseudogene, autotransporter outer membrane homology,putative transport, Not classified, putative ATP‑binding component of a transport system | |||||
Only 100 of 217 total aligned reads displayed.
AAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGTGATTGATT > NC_000913/1979347‑1979631 | ggataacgcctgaaatggcgaagaaacggtctaaataggctgatgcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaattaccccgcttattcgcaccttccCTaa > 1:259731‑M1/140‑143 (MQ=255)gcacatcgccttacagggcgaagaaacagtctaaataggctgattcaagtcatttacgggagaaaacatcggctcaaacatgaagaaatgaaatgactgcgtcagccgagaataatttccccgcttattcgcaccttccCTaa > 1:146158‑M1/140‑143 (MQ=255) ataactccttaaatggccaagatacggtctaaatagtctgattcaaggcatttacgggagaaaaaatcggctcaaacatcaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAtt > 1:1017378‑M1/138‑143 (MQ=255) agaacgccttaactggcgaagaaacggtctaacgaggctgattcaatgcatttacgggagaaaaaatcgcctcaaacatgaacaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccctaagt > 1:129348‑M1/138‑141 (MQ=255) gccttaaatggctaagaaacggtctaaacaggctgattcaaggactttacgggagaaaaaatcggcccaatcaggaataaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATa > 1:974607‑M1/133‑143 (MQ=255) aCAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACACACTAAggaaggtg > 1:435958‑M1/1‑135 (MQ=255) cttaaatgtcgaagaaacggtctaaataggctgattcaacgcatttacgggagaaaaaatcggcccaaacatgaagaaatgaaattactgagtcagccgagaagaatttccccgcttattcgcaccttccCtaagtaagatgg > 1:983916‑M1/131‑138 (MQ=255) cgtaaatggcgaagaaacggtctaaagaggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccctaagtaagatgg > 2:58907‑M1/131‑134 (MQ=255) cAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATTCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgc < 1:1151130‑M1/143‑10 (MQ=255) aGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcg > 2:822321‑M1/1‑133 (MQ=255) aGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaagatgcg > 2:920567‑M1/1‑133 (MQ=255) gAATAAGCGAAATGGGAGGTTGCGCACAGGCAAAATAACTCACCGTAAATAATCAGCTGCTATAAATAATCACTTGCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaa < 1:388328‑M1/143‑13 (MQ=255) taatCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaa < 2:582434‑M1/143‑16 (MQ=255) ggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcggccgagaggaatttccccgcttactcgcaccttccCTAATTAAATACaaagcaag < 2:37286‑M1/20‑1 (MQ=255) ggcgaagaaacggtctaaataggctgagtcaaggcatttacgggagaaataatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACagagaaag > 1:218458‑M1/124‑143 (MQ=255) gcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAgg < 2:700734‑M1/21‑1 (MQ=255) cgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTACATACAAAGAAAGGc < 2:1123280‑M1/22‑1 (MQ=255) cGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtcc < 2:45053‑M1/143‑20 (MQ=255) cGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtcc < 2:234724‑M1/143‑20 (MQ=255) gAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccc < 1:42151‑M1/143‑21 (MQ=255) gAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccc < 2:780578‑M1/143‑21 (MQ=255) aagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGcaa < 1:1188639‑M1/24‑1 (MQ=255) aaaTGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccct > 2:209741‑M1/1‑122 (MQ=255) ggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgaggcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCaa > 2:950501‑M1/113‑143 (MQ=255) ggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagccagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCaa < 2:1104959‑M1/31‑1 (MQ=255) aTGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATAACTATCCTGCAATACCAGATAAGCTATATTTAAACAGACACTTACCGCACAACAAGCAAAggaaggtacgaacaagtcgccgaaaaga > 1:1190023‑M1/1‑115 (MQ=255) ttGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagat < 1:601443‑M1/143‑32 (MQ=255) taaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACtta < 1:6426‑M1/35‑1 (MQ=255) aaatagcccgagtcaaggcgttcacgggagaaaaaagcggctaaaacatgacgacatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCGAATTAAATACAAAGAAAGGCAACAATCAACttaa > 1:931055‑M1/108‑143 (MQ=255) aataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACttaat < 2:251712‑M1/37‑1 (MQ=255) gctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaacgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACttaatgttaa < 2:142887‑M1/42‑1 (MQ=255) tgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACttaatgttaatg < 1:199651‑M1/44‑1 (MQ=255) cAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtca > 2:1019536‑M1/1‑101 (MQ=255) attcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGaa < 2:1175863‑M1/46‑1 (MQ=255) aaaaTAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTGTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcat > 2:857067‑M1/1‑100 (MQ=255) aaaaTAACTCACCGTAAATAATCATCTGCTATAAATAATCACGTTCATGCAATACCAGATAAGCTATATTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcaaacaagaccctgatatgagctcatgattgtcat > 1:1088933‑M1/1‑100 (MQ=255) tcaaggctttgactggataaaaaatcggctcaaacattaagaaatgaaatgactgagtcagccgataaaaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAAt > 1:215069‑M1/96‑143 (MQ=255) aaaTAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagacaatgtttgtcctc > 1:683978‑M1/1‑99 (MQ=255) catttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACTAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTa > 1:1032549‑M1/90‑143 (MQ=255) tCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgcgaacacgtttgtcatcttgcgcc > 1:74‑M1/1‑92 (MQ=255) tCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagcc < 1:330888‑M1/143‑52 (MQ=255) aataatCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGCCACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaaca > 2:490263‑M1/1‑84 (MQ=255) gctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTCAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTa < 2:519507‑M1/75‑1 (MQ=255) tataCATAACCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAcgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga < 2:73170‑M1/143‑73 (MQ=255) tataAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTCACCAACAGCAAACCAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga < 1:360608‑M1/143‑73 (MQ=255) tataAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCTCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga < 1:764847‑M1/143‑73 (MQ=255) tcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAACTGTTTTCCATACCTTAACCACTTGTTtaac < 2:402644‑M1/77‑2 (MQ=255) taaataaTCACTTTCATGCAATACCAGATAAGCTATTTTTAAAAACACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcctcatgagt > 2:882434‑M1/1‑69 (MQ=255) caaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATg > 2:1067105‑M1/66‑143 (MQ=255) taatCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTGCGGCAAAAGAGTTTATggaccgtgagaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatc > 2:278091‑M1/1‑65 (MQ=255) catgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGCTTAATGCGga < 1:307555‑M1/82‑1 (MQ=255) tCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaac > 2:414283‑M1/1‑62 (MQ=255) gaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTCGTTTAATGCGGAGaa < 2:663466‑M1/85‑1 (MQ=255) cACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAAGTAAggaagatgagaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaact > 1:853998‑M1/1‑61 (MQ=255) tttCATGCAATACCAGATAAGCTATTTTTAAATAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatcgaaccgggttcatcatgagtcatcaacttac > 1:630833‑M1/1‑58 (MQ=255) tttCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgacatcatgtttgtcctctggagccatagcacagggttcatcatgagtcatcaacttac > 1:863884‑M1/1‑58 (MQ=255) tCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggctcatcatcagtcatcaccttacct > 1:342483‑M1/1‑56 (MQ=255) gCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttccc < 1:209741‑M1/143‑92 (MQ=255) cAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgcc > 1:1075513‑M1/1‑51 (MQ=255) gccaGAGAAGCGATGTTTAAACAGACACTTGCCGCACAACAAACTGAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaca < 2:189680‑M1/142‑97 (MQ=255) tgagtcagccgagaagagtttcaccgtttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTc > 1:895269‑M1/43‑143 (MQ=255) tgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTc > 2:199651‑M1/43‑143 (MQ=255) aTAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaa < 2:632345‑M1/143‑102 (MQ=255) agccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTACTGCGGAGAATAAGAACACTATTTTCTTATaa < 1:294471‑M1/107‑1 (MQ=255) cTATTGTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcag < 1:1125992‑M1/143‑107 (MQ=255) tATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagc < 2:760662‑M1/143‑108 (MQ=255) gttgataaagctccacgtaccgcgcaacaAACTTAggatggtgcgaacaagtccctgatatgagatcatgtgtgtcatctttagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagca < 1:559799‑M1/130‑109 (MQ=255) aTTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagca < 1:1065001‑M1/143‑109 (MQ=255) aTTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagca < 2:721019‑M1/143‑109 (MQ=255) aTTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagca < 2:936596‑M1/143‑109 (MQ=255) aTTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagca < 2:1141289‑M1/143‑109 (MQ=255) aTTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtctgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagca < 2:329882‑M1/143‑109 (MQ=255) aTTTGTAAACGGACACTTACCGCACAACAAACTAAggaaggtccgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagca < 1:834994‑M1/143‑109 (MQ=255) ttttAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcctcaatagtcatcaacttaccttcgccgacagtgaattcagcagt < 1:658462‑M1/143‑111 (MQ=255) gaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTg < 1:909226‑M1/116‑1 (MQ=255) tttccccgcttattcgcaccttccCTAATTAAATACAACGTAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGaaa > 2:1188639‑M1/25‑143 (MQ=255) ccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATtata < 2:972368‑M1/124‑1 (MQ=255) ccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATtata < 2:318324‑M1/124‑1 (MQ=255) cttattcgcaccttccCTAATTAAATACAAAGAAAGGCAAAAATCAACTTAATGTTAATGAAATGTTATAAATATATTAACCACTTGTTTAATGCGGAGAATCAGTAGACTATGTTCTTATAATTGCATTTGAAATTATATGa < 1:760144‑M1/127‑1 (MQ=255) aCCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccc > 2:805938‑M1/1‑17 (MQ=255) aCCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagacca > 2:431309‑M1/1‑17 (MQ=255) tcgcaccttccCTAATGAAATACAAAGAAAGGCAACAAGCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCAcc > 2:642550‑M1/12‑143 (MQ=255) cgggcagagtaaggaaggtgggaacatgtctctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaa < 1:1004853‑M1/134‑132 (MQ=255) tgacagactaaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaag < 2:677416‑M1/137‑133 (MQ=255) caacaaACGAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaag < 2:435958‑M1/143‑133 (MQ=255) aacaaACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaaga > 1:484156‑M1/1‑10 (MQ=255) acagACTAAggaaggtgcgaacaagcccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagag < 2:740572‑M1/143‑135 (MQ=255) ttccATACTTAAATGCAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGTg > 2:438672‑M1/5‑143 (MQ=255) ttctaAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcagctggagccatagcacagggttcatcatgagtcatcaacttacctccgccgacagtgaactctacgttgatcgccgtcagaccagaaaagagatt > 1:295763‑M1/3‑6 (MQ=255) aaCTAAggaaggtgcgaacaagtccctgatctgagatcatgattgtcatctggcgccatcgaacagggtgcatcatgagtcatcaacttaccttcgccgacagtgaattcaccagtaaccgccctcagacccgcacagagatt > 1:791283‑M1/1‑6 (MQ=255) aCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattt > 2:223861‑M1/1‑5 (MQ=255) aCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgcc > 2:1058951‑M1/1‑5 (MQ=255) aCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgcc < 1:1058951‑M1/122‑118 (MQ=255) cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaaaagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagccgtaagcgccgtcagaccagaacagagatttt > 2:345232‑M1/1‑4 (MQ=255) cTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTGCGCAAATTAACAAATTGATTAAGTCGGAGAATCAGTACACTATTTTCTTATAAGTACATTTGAAATTATATGATCACCGGGAGtgattg > 1:1171420/1‑143 (MQ=255) aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttct < 1:410353‑M1/143‑142 (MQ=255) aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttct > 2:912750‑M1/1‑2 (MQ=255) aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttct < 1:693599‑M1/143‑142 (MQ=255) aggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttctt < 1:711825‑M1/143‑143 (MQ=255) aggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagagaattcagcagtaagcgccgtcagaccagaaaagagattttctt > 2:1111190‑M1/1‑1 (MQ=255) | AAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGTGATTGATT > NC_000913/1979347‑1979631 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |