New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 247656574 (1.070)3 (0.050) 3/268 10.2 4.1% intergenic (+57/‑17) torI/pawZ response regulator inhibitor for tor operon/tRNA‑OTHER
?NC_000913 = 2476583 71 (1.090)pseudogene (2/15 nt) pawZ tRNA‑OTHER
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CAAGATGGTTATATCGTGACCATTGTGAATTCAAAAATAAGCTCTTAAGCCGCGCCAATGGGTAAAATAGCGGGTAAAATATTTCTCACATCTAAAAAACACCATTCCAATCAATCCCCTGCTGCTTCAAGTAGATGTCTGCAGGGGACACCATCCTTGTGTTTATCCCTAAAACCACATAAAAACCGTAAATTAAATTCGAACTAGCAGGCCGAATAAGGCACACCAGGAACTCGTGGTTTTATTCATTATGAAGTGGTTTTTACCTGTTCTCTTAGCCAG  >  NC_000913/2476444‑2476725
                                                                                                                                           |                                                                                                                                              
cAAGATGGTTATATCGTGACCATTGTGAATTCAAAAATAAGCTCTTAAGCCGCGCCAATGGGTAAAATAGCGGGTAAAATATTTCTCACATCTAAAAAACACCATTCCAATCAATCCCCTGCTGCTCCAAGCAGATGTCTGCa                                                                                                                                             >  1:353446/1‑143 (MQ=255)
 aaGATGGTTATATCGTGACCATTGTGAATTCAAAAATAAGCTCTTAAGCCGCGCCAATGGGTAAAATAGCGGGTAAAATATTTCTCACCTCTAACAAACACCATTCCAACCAATCCCCTGCTGCTTCAAGTAGATGTCTGCAg                                                                                                                                            <  2:943431/143‑1 (MQ=255)
 aaGATGGTTATAACGTGACCATTGTGAATTCAAAAATAAGCTCTTAAGCCGCGCCAATAGGTAAAATAGCGGGTAAAATATTTCTCACATCTAAAAAACACCATTCCAATCAATCCCCTGCTGCTTCAAGTAGATGTCTGCAg                                                                                                                                            <  1:76682/143‑1 (MQ=255)
     tGGTTATACCGTGACCATTGTGAATTCAAAAATAAGCTCTTAAGCCGCGCCAATGGGTAAAATAGCGGGTAAAATATTCCTCACATCTAAAAAACACCATTCCAATCAATCCCCTGCTGCTTCAAGTAGATGTCTGCAGGTGa                                                                                                                                        <  1:760943/143‑1 (MQ=255)
     tGGTTATACCGTGACCATTGTGAAGTCAAAAATAAGCTCTTAAGCCGCGCCAATGGGTAAAATAGCGGGTAAAATATTTCTCACATCGAAAAAACACCATTCCAATCAATCCCCTGCTGCTTCAAGTAGATGTCTGCAGGGGa                                                                                                                                        <  1:557995/143‑1 (MQ=255)
        ttATATCGTGACCATTGTGAATTCAAAAATAAGCTCTTAAGCCGCGCCAATGGGTAAAATAGCGGGTAAAATATTTCTCACATCTAAAAAACACCATTCCAATCAATCCCCTGCTGCTTCAAGTAGATGTCTGCAGGGGacac                                                                                                                                     >  2:948526/1‑143 (MQ=255)
        ttATATCGTGACCATTGTGAATTCAAAAATAAGCTCTTAAGCCGCGCCAATGGGTAAAATAGCGGGTAAAATATTTCTCACATCTAAAAAACACCATTCCAATCAATCCCCTGCTGCTTCAAGTAGATGTCTGCAGGGGacac                                                                                                                                     >  2:823244/1‑143 (MQ=255)
            atCGTGACCATTGTGAATTCAAAAATAAGCTCTTAAGCCGCGCCAATGGGTAAAATAGCGGGTAAAATATTTCTCACATCTAAAAAACACCATTCCAATCAATCCCCTGCTGCTTCAAGTAGATGTCTGCAGGGGACACCATc                                                                                                                                 <  2:250104/143‑1 (MQ=255)
               gTGACCATTGTGAATTCAAAAATAAGCTCTTAAGCCGCGCCAATGGGTAAAATAGCGGGTAAAATATTTCTCACATCTAAAAAACACCATTCCAATCAATCCCCTGCTGCTTCAAGTAGATGTCTGCAGGGGACACCATCCtt                                                                                                                              <  1:119338/143‑1 (MQ=255)
                    cATTGTGAATTCAAAAATAAGCTCTTAAGCCGCGCCAATGGGTAAAATAGCGGGTAAAATATTTCTCACATCTAAAAAACACCATTCCAATCAATCCCCTGCTGCTTCAAGTAGATGTCTGCAGGGGACACCCTCCTTGTGtt                                                                                                                         >  1:312903/1‑143 (MQ=255)
                    cATTGTGAATTCAAAAATAAGCTCTTAAGCCGCGCCAATGGGTAAAATAACGGATTAAGGATGGCATACACATAAAAAACACCATTCCAATCAATCCCCTGCTGCTTCAAGTAGATGTCTGCAGGGGACACCATACTTGTGtt                                                                                                                         >  2:505350/1‑143 (MQ=255)
                     aTTGTGAATTCAAAAATAAGCTCTTAAGCCGCGCCAATGGGTAAAATAGCGGGTAAAATATTTCTCACATCTAAAAAACACCATTCCAATCAATCCCCTGCTGCTTCAAGTAGATGTCTGCAGGGGACACCATCCTTGTGttt                                                                                                                        <  1:680545/143‑1 (MQ=255)
                     aTTGTGAATTCAAAAAGAAGCTCTTAAGCCGCGCCAATGGGTAAAATAGCGGGTAAAATATGTCTCACATCTAAAAAACACCATTCCAATCAATCCCCTGCTGCTTCAAGTAGATGTCTGCAGGGGACACCATCCTTGTGttt                                                                                                                        <  1:441315/143‑1 (MQ=255)
                      ttGTGAATTCAAAAATAAGCTCTTAAGCCGCGCCAATGGGTAAAATAGCGGGTAAAATATTTCTCACATCTAAAAAACACCATTCCAATCAATCCCCTGCTGCTTCAAGTAGCTGTCTGCAGGGGACACCATCCTTGTGTTTa                                                                                                                       >  1:574781/1‑143 (MQ=255)
                       tgtgAATTCAAAAATAAGCTCTTAAGCCGCGCCAATGGGTAAAATAGCGGGTAAAATATTTCTCACATCTAAAAAACACCATTCCAATCAATCCCCTGCTGCTTCAAGTAGATGTCTGCAGGGGACACCATCCTTGTGTTTAt                                                                                                                      >  2:569124/1‑143 (MQ=255)
                       tgtcAATTCAAAAATAAGCTCTTAAGCCGCGCCAATGGGTAACATAGCGGGTAAAATATTTCTCACATCTAAAAAACACCATTCCAATCAATCCCCTGCTGCTTCAAGTAGATGTCTGCAGGGGACACCATCCTTGTGTTTAt                                                                                                                      <  1:635976/143‑1 (MQ=255)
                              tCAAAAATAAGCTCTTAAGCCGCGCCAATGGGTAAAATAGCGGGTAAAATATTTCTCACATCTAAAAAACACCATTCCAATCAATCCCCTGCTGCTTCAAGTCGATGTCACCAGGGGACACCATCCTTGTGTTTATCCCTaaa                                                                                                               >  2:812797/1‑143 (MQ=255)
                                aaaaaTAAGCTCTTAAGCCGCGCCAATGGGTAAAATAGCGGGTAAAATATTTCTCACATCTAAAAAACACCATTCCAATCAATCCCCTGCTGCTTCAAGTAGATGTCTGCAGGGGACACCATCCTTGTGTTTATCCCTAAAAc                                                                                                             >  2:694911/1‑143 (MQ=255)
                                aaaaaTAAGCTCTTAAGCCGCGCCAATGGGTAAAATAGCGGGTAAAATATTTCTCACATCTAAAAAACACCATTCCAATCAATCCCCTGCTGCTTCAAGTAGATGTCTGCAGGGGACACCATCCTTGTGTTTATACCTAAAAc                                                                                                             >  2:773047/1‑143 (MQ=255)
                                    aTAAGCTCTTAAGCCGCGCCAATGGGTAAAATAGCGGGTAAAATATTTCTCACATCTAAAAAACACCATTCCAATCAATCCCCTGCTGCTTCAAGTAGATGTCTGCAGGGGACACCCTCCTTCTGTTTATCCCTAAAacaaca                                                                                                         >  2:771336/1‑143 (MQ=255)
                                          tctTAAGCCGCGCCAATGGGTAAAATAGCGGGTAAAATATTTCTCACATCTAAAAAACACCATTCCAATCAATCCCCTGCTGCTTCAAGTAGATGTCTGCAGGGGACACCATCCTTGTGTTTATCCCTAAAACCACATaaaaa                                                                                                   >  2:271945/1‑143 (MQ=255)
                                          tctTAAGCCGCGCCAATGGGTAAAATAGCGGGTAAAATATTTCTCACACCTAAAAAACACCATTCCAATCAATCCCCTGCTGCTTCAAGTAGATGTCTGCAGGGGCCACCATCCTTGCGTTTATCCCTAACACCACATtaaac                                                                                                   >  1:104856/1‑142 (MQ=255)
                                          tctTAAGCCGCGCCAATGGGTAAAATAGCGGGTAAAATATTTATCACATCTAAAAAACACCATTCCAATCAATCCCCTGCTGCTTCAAGTAGATGTCTGCAGGGGACAACATCCTTCTGTTTGTCCCTAACAacaccaaacaa                                                                                                   >  1:365387/1‑136 (MQ=255)
                                            ttAAGCCGCGCCAATGGGTAAAATAGCGGGTAAAATATTTCTCACATCTAAAAACCACCATTCCAATCAATCCCCTGCTGCTTCAAGTAGATGTCTGCAGGGGACACCATCCTTGTGTTTATCCCTAAAACCACATAAAAAcc                                                                                                 <  2:185224/143‑1 (MQ=255)
                                            taaaGCCGCGCCAATGGGTAAAATACAAGGTAAAATAATTCACACATCTAAAAAACACAATTCCAATCAGACCACCGCAACGTCCAGGCGATCACTGCAGGGGACCCCCTCCTTGTGACGCTCCATAAAACAACATAGAAAcc                                                                                                 >  1:360576/3‑143 (MQ=255)
                                                 ccGCGCCAATGGGTAAAATAGCGGGTAAAATATTTCTCACATCTAAAAAACACCATTCCAATCAATCCCCTGCTGCTTCAAGTAGATGTCTGCAGGGGACACCATCCTTGTGTTTATCCCTAAAACCACATAAAAACCGcaaa                                                                                            >  1:889318/1‑143 (MQ=255)
                                                    cgcCCATGGGTAAAATAGCGGGTAAAATATTTCTCACATCTAAAAAACACCATTCCAATCAATCCCCTGCTGCTTCAAGTAGAGGTCTGCAGGGGACACCATCCTTGTGTTTATCCCTAAAACCACATAAAAACCGtaaatta                                                                                         <  2:822537/143‑1 (MQ=255)
                                                      ccAATGGGTAAAATAGCGGGTAAAATATTTCTCACATCTAAAGAACACCATTCCAATCAATCCCCTGCTGCTTCAAGTAGATGTCTGCAGGGGACACCATCCTTGTGTTTATCCCTAAAACCACATAAAAACCGtaaattaaa                                                                                       <  1:1002603/143‑1 (MQ=255)
                                                       cAATGGGTAAAATAGCGGGTAAAATATTTCTCACATCTAAAAAACACCATTCCAATCAATCCCCTGCTGCTTCAAGTAGATGTCTGCAGGGGACACCATCCTTGTGTTTATCCCTAAAACCACATAAAAACCGtaaattaaat                                                                                      >  1:1156074/1‑143 (MQ=255)
                                                              tAAAATAGCGGGTAAAATATTTCTCACATCTAAAAAACACCATTCCAATCAATCCCCTGCTGCTTCAAGTAGATGTCTGCAGGGGACACCATCCTTGTGTTTATCCCTAAAACCACATAAAAACCGTAAATTAAATTCGAACt                                                                               >  2:1048600/1‑143 (MQ=255)
                                                                   tcgCGGGTAAGATATTTCGCACATCTAAAAAACACCATTCCAATGAATCCCCTGCTGCTTCAAGTAGATGTCTGCAGCGGACACCATACTTGTGTTTATCCCTAAAACCACATAAAAGCCGTAAATTAAATTCGGACTAGCAg                                                                          <  1:312042/141‑1 (MQ=255)
                                                                   tAGCGGGTAAAATATTTCTCACATCTAAAAAACACCATTCCAATCAATCCCCTGCTGCTTCAAGTAGATGTCTGCAGGGGACACCATCCTTGTGTTTATCCCTAAAAACACATAAGAACCGTAAATTAAATTCGAACTAGCAg                                                                          <  2:230461/143‑1 (MQ=255)
                                                                   tAGCGGGTAAAATATTGCTCACATCTAAAAAACACCAGTCCAATCAAGCCCCTGCTGCTTCAAGCAGATGTCCGCAGGGGACACCAGCCCTGTGTTTATCCCTAAAACCACATAAAAACCGTAAATTAAAGTCGAACTAGCAg                                                                          <  1:311241/143‑1 (MQ=255)
                                                                    aGCGGGTAAAATATTTCTCACATCTAAAAAACACCATTCCAATCAATCCCCTGCTGCTTCAAGTAGATGTCTGCAGGGGACACCATCCTTGTGTTTATCCCTAAAACCACATAAAAACCGTAAATTAAATTCGAACTAGCAgg                                                                         <  1:271945/143‑1 (MQ=255)
                                                                     gccggTAAAATACTTCTCACATCTAAACAACACCATTCCAATCAATCCCCTGCTGCTTCAAGTAGATGTCTGCAGGGGACACCATCCTTGTGTTTATCCCTAAAACCACATAAAAACCGTAAATTAAATTCGAACTAGCAGGc                                                                        <  1:548749/140‑1 (MQ=255)
                                                                        ggTAAAATATTTCTCACATCTAAAAAACACCATTCCAATCAATCCCCTGCTGCTTCAAGTAGATGTCTGCAGGGGACACCATCCTTGTGTTTATCCCTAAAACCACATAAACACCGTCAATTAAATTCGAACTAGCAGGCCGa                                                                     >  2:785843/1‑143 (MQ=255)
                                                                            aactatTTCTCACATCTAAAAAACACCATTCCACTCAATCCCCTGCTGCTTCAAGTAGATGTCTGCAGGGGACACCATCCTTGTGTTTATCCCTAAAACCACATAAAAACCGTAAATTAAATTCGAACTAGCAGGCCGAATaa                                                                 <  2:919853/140‑1 (MQ=255)
                                                                             aaTATTTCCCACGTCTAAAAAACACCATTCCAATCAATCCCCTGCTGCTTCAAGTAGATGTCTGCAGGGGACACCAGCCTTGTGTTTATCCCTAAAACCACATAAAAACCGTAAATTAAATTCGAACTAGCAGGCCGAATAAg                                                                <  1:452819/143‑1 (MQ=255)
                                                                              atatTTCTCACATCTAAAAAACACCATTCCAATCAATCCCCTGCTGCTTCAAGTAGATGTCTGCAGGGGACACCATCCTTGTGTTTATCCCTAAAACCACATAAAAACCGTAAATTAAATTCGAACTAGCAGGCCGAATAAgg                                                               >  1:709791/1‑143 (MQ=255)
                                                                              atatTTCTCACATCTAAAAAACACCATTCCAATCAATCCCCTGCTGCTTCAAGTAGATGTCTGCAGGGGACACCATCCTTGTGTTTATCCCTAAAACCACATAAAAACCGTAAATTAAATACGAACTAGCAGGCCGAATAAgg                                                               >  1:432718/1‑143 (MQ=255)
                                                                                     tcACATCTAAAAAACACCATTCCAATCAATCCCCTGCTGCTTCAAGTAGATGTCTGCAGGGGACACCATCCTTGTGTTTATCCCTAAAACCACATAAAAACCGTAAATTAAATTCGAACTAGCAGGCCGAATAAGGCACACCa                                                        >  2:56769/1‑143 (MQ=255)
                                                                                     tcACATCTAAAAAACACCATTCCAATCAATCCCCTGCTGCTTCAAGTAGATGTCTGCAGGGGACACCATCCTTGTGTTTATCCCTAAAACCACATAAAAACCGTAAATTAAATTCGAACTAGCAGGCCGAATAAGGCACACCa                                                        >  2:300696/1‑143 (MQ=255)
                                                                                     tcACATCTAAAAAACACCATTCCAATCAATCCCCTGCTGCTTCAAGTAGATGTCTGCAGGGGACACCATCCTTGTGTTTATCCCTAAAACCACATAAAAACCGTAAATTAAATTCGAACTAGCAGGCCGAACCAGGCGCACCa                                                        >  2:601158/1‑143 (MQ=255)
                                                                                     taacgtctagagtacacCTTTCCGATCAACCGTCTTCTGCTTCCAGTAGATGTCGGCAGGGGACACCATCTTTGTTTTTATCCCTAAAACCACATAAAAACCGTAAATTAAATTCGAACTAGCAGGCCGAATAAGGCACACCa                                                        <  1:714600/130‑1 (MQ=255)
                                                                                                acaccatatgccAATCAATCCCCTGCTGCTTCAAGTAGATGTCTGCAGGAGACACCATCCTTGTGTTTATCCCTAAAACCACATAAAAACCGTAAATTAAATTCGAACTAGCAGGCCGAATAAGGCACACCAGGAACTCGTgg                                             <  1:707127/133‑1 (MQ=255)
                                                                                                   cacCCTTCCAATCATTCCCCTGCTGCTTCAAGTAGATGTCTGCAGGGGACACCATCCTTGTGTTTATCCCTAAAACCACATAAAAACCGTAAATTAAATTCGAACTAGCAGGCCGAATAAGGCACACCAGGAACTCGTGGttt                                          <  1:2153/143‑1 (MQ=255)
                                                                                                    acCATTCCAATCAATCCCCTGCTGCTTCAAGTAGATGTCTGCAGGGGACACCATCCTTGTGTTTATCCCTAAAACCACATAAAAACCGTACATTAACTTCGAACTAGCAGGCCGAACAACGCCAGCCAGGAACTCgacgatta                                         >  1:1025379/1‑136 (MQ=255)
                                                                                                     ccATGCCAATCAATCCCCTGCTGCTTCAAGTAGATGTCTGCAGGGGACACCGTCCTCGTGTTTATCCCTAAAACCACATAAAAACCGTAAATTAAATTCGAACTAGCAGGCCGAATAAGGCACACCAGGAACTCGTGGTTTTa                                        <  1:12487/143‑1 (MQ=255)
                                                                                                      cagtCCAATCAATCCCCTGCTGCTTCAAGTAGATGTCTGCAGGGGACACCATCCTTGTGTTTATCCCTAAAACCACATAAAAACCGTAAATTAAATTCGAACTAGCAGGCCGAATAAGGCACACCAGGAACTCGTGGTTTTAt                                       <  2:405042/140‑1 (MQ=255)
                                                                                                       aTTCCAATCAATCCCCTGCTGCTTCAAGTAGATGTCTGCAGGGGACACCATCCTTGGGTGTATCCCTAAAACCACATAAAACACGTCAAATATAGTCGGACTAGCAGGCCGAATCAGGCACACCAGGAACtggggggttgatg                                      >  2:105741/1‑131 (MQ=255)
                                                                                                           caatcaatCCCCTGCTGCTTCAAGTAGATGTCTGCAGGGGACACCATCCTTGTGTTTATCCCTAAAACCACATAAAAACCGTAAATTAAATTCGAACTAGCAGGCCGAATAAGGCACACCAGGAACTCGTGGTTTTATTCAtt                                  >  2:399572/1‑143 (MQ=255)
                                                                                                           caatcaatCCCCTGCTGCCTCAAGTAGATGTCTGCAGGGGACACCATCCTTGTGTTTATCCCTAAAACCACATAAAAACCGTAAATTAAATTCGAACTAGCAGCCCGAATAAGGCCCACCAGCAACTCGTggatctactccgt                                  >  1:95899/1‑132 (MQ=255)
                                                                                                             atcaatcCCCTGCTGCTTCAAGTAGATGTCTGCAGGAGAGACCATCCTTGTGTTTATCCCTAAAACCACATAAAAACCGTAAATTAAATTCGAACTAGCAGGCCGAAAAAGGCACACCACGAACACGGAGTCTTATTcatcat                                >  1:857069/1‑143 (MQ=255)
                                                                                                               caacccccgtccgctTCAAGTAGATGTCTGCAGGGGACACCATCCTTGTGTTTATCCCTAAAACCACATAAAAACCGTAAATTAAATTCGAACTAGCAGGCCGAATAAGGCACACCAGGAACTCGTGGTTTTATTCATTATGa                              <  2:1063160/131‑1 (MQ=255)
                                                                                                                aatcCCCTGCTGCTTCAAGTAGATGTCTGCAGGGGACACCATCCTTGTGTTTATCCCTAAAACCACATAAAAACCGTAAATTAAATTCGAACTAGCAGGCCGAATAAGGCACACCAGGAACTCGTGGTTTTATTCATTATGaa                             >  2:697402/1‑143 (MQ=255)
                                                                                                                 atcCCCTGCTGCTTCAAGTAGATGTCTGCAGGGGACACCATCCTTGTGTTTATCCCTAAAACCACATAAAAACCGTAAATTAAATTCGAACTAGCAGGCCGAATAAGGCACACCAGGAACTCGTGGTTTTATTCATTATGAAg                            <  1:1135371/143‑1 (MQ=255)
                                                                                                                  tcCCCTGCTGCTTCAAGTAGATGTCTGCAGGGGACACCATCCTTGTGTTTATCCCTAAAACCACATAAAAACCGTAAATTAAATTCGAACTAGCAGGCCGAATAAGGCACACCAGGAACTCGTGGTTTTATTCATTATGAAGt                           >  1:957951/1‑143 (MQ=255)
                                                                                                                  tcCCCTGCTGCTTCAAGTAGATGTCTGCAGGGGACACCATCCTTGTGTTTATCCCTAAAACCACATAAAAACCGTAAATTAAATTCGAACTAGCAGGCCGAATAAGGCACACCAGGAACTCGTGGTTCTATTCATTATGAAGt                           >  1:810279/1‑143 (MQ=255)
                                                                                                                    cccTGCTGCTTCAAGTAGATGTCTGCAGGGGACACCATCCTTGTGTTTATCCCTAAAACCACATAAAGACCGTAAATTAAATTCGAACTAGCAGGCCGAATAAGGCACACCAGGAACTCGTGGTTTTATTCATTATGAAGTgg                         >  1:32540/1‑143 (MQ=255)
                                                                                                                    cccTGCTGCTTCAAGTAGATGTCTGCAGGGGACACCATCCTTGTGTTTATCCCTAAAACCACATAAAAACCGTAAATTAAATTCGAACTAGCAGGCCGAATAAGGCACACCAGGAACTCGTGGTTTTATTCATTATGAAGTgg                         <  1:496593/143‑1 (MQ=255)
                                                                                                                    cccTGCTGCTTCAAGTAGATGTCTGCAGGGGACACCATCCTTGTGTTTATCCCTAAAACCACATAAAAACCGTAAATTAAATTCGAACTAGCAGGCCGAATAAGGCACACCAGGAACTCGTGGTTTTATTCATTATGAAGTgg                         <  1:616793/143‑1 (MQ=255)
                                                                                                                      ctgctgCTTCAAGTAGATGTCTGCAGGGGACACCATCCTTGTGTTTATCCCTAAAACCACATAAAAACCGTAAATTAAATTCGAACTAGCAGGCCGAATAAGGCACACCAGGAACTCGTGGTTTTATTCATTATGAAGTGGtt                       >  1:861504/1‑143 (MQ=255)
                                                                                                                      ctgctgCGTCAAGTAGATGTCTGCAGGGGACCCCATCCTTGTGTTTATCCCTAAAACCACATAAAAACCGTACATTAAATTCGAACTAGCAGGCCGAATAAGGCACACCAGGAACTCGTGGTTTTATTCATTATGAAGTGGtt                       <  2:263433/143‑1 (MQ=255)
                                                                                                                         ctgctTCAAGTAGCTGTCTGCAGGGGACACCATCCTTGTGTGTATCCCTAAAACCACATAAAAACCGTAAATTAAATTCGAACTAGCAGGCCGAATAAGGCACACCAGGAACTCGTGGTTTTATTCATTATGAAGTGGttttt                    <  2:147753/143‑1 (MQ=255)
                                                                                                                           gctTCAAGTAGATGTCTGCAGGGGACACCATCCTTGTGTTTATCCCTAAAACCACATAAAAACCGTAAATTAAATTCGAACTAGCAGGCCGAATAAGGCACACCAGGAACTCGTGGTTTTATTCATTATGAAGTGGTTTTTAc                  <  1:928124/143‑1 (MQ=255)
                                                                                                                           gctTCAAGTAGATGTCTGCAGGGGACACCATCCTTGTGTTTATCCCTAAAACCACATAAAAACCGTAAATTAAATTCGAACTAGCAGGCCGAATAAGGCACACCAGGAACTCGTGGTTTTATTCATTATGAAGTGGTTTTTAc                  <  1:948526/143‑1 (MQ=255)
                                                                                                                            ctTCAAGTAGATGTCTGCAGGGGACACCATCCTTGTGTTTATCCCTAAAACCACATACAAACCGTAAATTAACTTCGACCTAGCAGGCCGAATAAGGCACACCAGGCACTCGTGGATTTATGCATTATGACATGGAATTTAca                 >  1:1118723/1‑142 (MQ=255)
                                                                                                                            ctTCAAGTAGATGTCTGCAGGGGACACCATCCTTGTGTTTATCCCTAAAACCACATAAAAACCGTAAATTAAATTCGAACTAGCAGGCCGAATAAGGCACACCAGGAACTCGTGGTTCTATTCATTATGCAGTGGTTTTTAcc                 >  1:497990/1‑143 (MQ=255)
                                                                                                                                aaGGAGATGTCTGCAGGGGACACCATCCTTGTGTTTATCCCTAAAACCACATAAAAACCGTAAATTAAATTCGAACTAGCAGGCCGAATAAGGCACACCAGGAACTCGTGGTTTTATTCATTATGAAGTGGTTTTTACCTGtt             <  2:594010/143‑1 (MQ=255)
                                                                                                                                 aGTAGATGTCTGCAGGGGACACCATCCTTGTGTTTATCCCTAAAACCACATAAAAACCGTAAATTAAATTCGAACTAGCAGGCCGAATAAGGCACACCAGGAACTCGTGGTTTTATTCATTATGAAGTGGTTTTTACCTGTtc            <  1:443110/143‑1 (MQ=255)
                                                                                                                                   tAGATGTCTGCAGGGGACACCACCCTTGTGTTTATCCCTACACCCACATATAATCCGTAAATTACATTCGAACTAGCAGGCCGAATAAGGCACACCAGGAACTCGTGGTTTTATTCATTATGAAGTGGTTTTTACCTGTtctc          <  2:165873/143‑1 (MQ=255)
                                                                                                                                     gATGTCTGCAGGGGACACCATCCTTGTGTTTATCCCTAAAACCACATAAAAACCGTAAATTAAATTCGAACTAGCAGGCCGAATAAGGCACACCAGGAACTCGTGGTTTTATTCATTATGAAGTGGTTTTTACCTGTTCTCtt        <  2:709791/143‑1 (MQ=255)
                                                                                                                                      aTGTCTGCAGGGGACACCATCCTTGTGTTTATCCCTAAAACCACATAAAAACCGTAAATTAAATTCGAACTAGCAGGCCGAATAAGGCACACCAGGAACTCGTGGTTTTATTCATTATGAAGTGGTTTTTACCTGTTCTCTTa       <  1:1204058/143‑1 (MQ=255)
                                                                                                                                          cTGCAGGAGACACCATCCATGTGTTTATCCCGAAAACCACATAAAAACCGTAAATTAAATTCGAACTAGCAGGCCGAATAAGGCACACCAGGAACTCGTGGTTTTATTCATTATGAAGTGGTTTTTACCTGTTCTCTTAGCCa   <  2:203006/143‑1 (MQ=255)
                                                                                                                                           tGCAGGGGACACCATCCTTGTGTTTATCCCTAAAACCACATAAAAACCGTAAATTAAATTCGAACTAGCAGGCCGAATAAGGCACACCAGGAACTCGTGGTTTTATTCATTATGAAGTGGTTTTTACCTGTTCTCTTAGCCAg  >  2:802176/1‑143 (MQ=255)
                                                                                                                                           tGCAGGGGACACAATACCTGTGTTTATCCCTAAAACCACAGAAAAACCGTAAATTAAATTCGAGCTAGCAGGCCGAATAAGGCACACCAGGAACTCGTGGTTTTATTCATTATGAAGTGGTTTTTACCTGTTCTCTTAGCCAg  <  1:569124/143‑1 (MQ=255)
                                                                                                                                           |                                                                                                                                              
CAAGATGGTTATATCGTGACCATTGTGAATTCAAAAATAAGCTCTTAAGCCGCGCCAATGGGTAAAATAGCGGGTAAAATATTTCTCACATCTAAAAAACACCATTCCAATCAATCCCCTGCTGCTTCAAGTAGATGTCTGCAGGGGACACCATCCTTGTGTTTATCCCTAAAACCACATAAAAACCGTAAATTAAATTCGAACTAGCAGGCCGAATAAGGCACACCAGGAACTCGTGGTTTTATTCATTATGAAGTGGTTTTTACCTGTTCTCTTAGCCAG  >  NC_000913/2476444‑2476725

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.