New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3150549 =	NA (NA)	3 (0.050)	3/262	10.0	NA	intergenic (+5/+267)	yghA/exbD	putative oxidoreductase/membrane spanning protein in TonB‑ExbB‑ExbD complex
	?	NC_000913	3150578 =	NA (NA)					noncoding (27/255 nt)	RIP222 (repetitive extragenic palindromic) element, contains 5 REP sequences and 2 IHF sites	RIP222 (repetitive extragenic palindromic) element, contains 5 REP sequences and 2 IHF sites
Rejected: Coverage evenness skew score above cutoff.

GCAACCGGCGGAACTGGCCCCTGTATATGTTTATCTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCG  >  NC_000913/3150439‑3150720                                                                                                                                            |                                                                                                                                               tcttttggcggAGCTGGCCCCCGTATATGTTTATCTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCAtt                                                                                                                                             <  2:864662/137‑1 (MQ=255) gggaCCGGCGTAAGTGGCGTCTGTATATGTGTAGCGGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGGGGGGGGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCAtt                                                                                                                                             <  1:152907/140‑1 (MQ=255) gCAACCGGCGGAACTGGCCCCTGTATATGTTTATCTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCAtt                                                                                                                                             <  2:1013584/143‑1 (MQ=255) gCAACCGGCGGAACTGGCCCCTGTATATGTTTATCTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCAGTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCAACAtt                                                                                                                                             >  1:991338/1‑143 (MQ=255)  cgaCCGGCGGAACTGGCCCCTGTATATGTTTATCTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATtg                                                                                                                                            <  1:372455/141‑1 (MQ=255)  cAACCGGCGGAACTGGCCCCTGTATATGTTTATCTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATtg                                                                                                                                            >  2:325940/1‑143 (MQ=255)     ccGGCGGAACTGGCCCCTGTATATGTTTATCTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCATGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGa                                                                                                                                         >  1:223986/1‑143 (MQ=255)      cggcggAACTGGCCCCTGTATATGTTTATCTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGGGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGaa                                                                                                                                        >  2:390761/1‑143 (MQ=255)       ggcggAACTGGCCCCTGTATATGTTTATCTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGCACAGCCACCGGGCATCATTGTGAAt                                                                                                                                       >  2:744430/1‑143 (MQ=255)          ggAACTGGCCCCTGTATATGTTTATCTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCa                                                                                                                                    <  1:632264/143‑1 (MQ=255)             acggggcgcTGTATATGTTTATCTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCActc                                                                                                                                 <  1:1088349/135‑1 (MQ=255)               tgcccccTGTATATGTTTATCTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCtt                                                                                                                               <  2:633130/140‑1 (MQ=255)               tGGCCCCTGTATATGTTTATCTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCtt                                                                                                                               >  2:1124416/1‑143 (MQ=255)                 gCCCCTGTATATGTTTATCTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTAc                                                                                                                             <  1:1039326/143‑1 (MQ=255)                  ccccTGTATATGTTTATCTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTAcc                                                                                                                            <  1:250132/143‑1 (MQ=255)                   cccTGTATATGTTTACCTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCGCGGCGTGTGCGGCGGCGAGCATTTCGGTTAAAAAAATGCCCGGTTGTGAGCAGCCACCGGCGATCCTTGTGAGTTCACTCTCACCt                                                                                                                           >  1:372287/1‑143 (MQ=255)                      tGTATATGTTTATCTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGAt                                                                                                                        >  1:688171/1‑143 (MQ=255)                           atGTTTATCTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGTTTAAAAAAATGCCCGGTTGTGAAAAGAAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGc                                                                                                                   <  2:944243/143‑1 (MQ=255)                            tGTTTATCTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCATCCCTGATGTGGCg                                                                                                                  >  1:639867/1‑143 (MQ=255)                             gTTTATCTGGCAAGTCAGGAGTCGAGGTACGTCACCGCAGAAGTGCACGGCGTGTACGGCGGCGAGCATGTAGGTTAAAAAAATGCCCAGGTGTGAACAGCAACCGGGACTCCTTGTGGATTCACTCTTCCCTGATGTGCCGa                                                                                                                 >  2:841056/1‑143 (MQ=255)                             gTTTATCTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGACGTGGCGa                                                                                                                 >  1:1058849/1‑143 (MQ=255)                                taccTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGaaaa                                                                                                              <  2:692619/140‑1 (MQ=255)                                 aTCTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAAc                                                                                                             >  2:10082/1‑143 (MQ=255)                                  tCTGGCAAGTCAGGAGTCGAGCTACGTCACCTCATAAGTTCACGTGGTGTGCGGCGGCGAGCATTTAGGTTAAAAATATGCCCGGGTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAGACg                                                                                                            >  1:796103/1‑143 (MQ=255)                                  tCTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCAGTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCAATGTGAATTCACTCTTACCTGATGTGGCGAAAACg                                                                                                            >  1:525622/1‑143 (MQ=255)                                   ctcgCAAGTCAGGAGTCGCGCTACGTCACCGGAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAGAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCTCTCTTACCTGATGTGGCGAAAACGc                                                                                                           <  1:1022091/140‑1 (MQ=255)                                   cTGGCAGGGCAGGAGGCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGc                                                                                                           <  1:272063/143‑1 (MQ=255)                                      gCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCtt                                                                                                        >  1:460187/1‑143 (MQ=255)                                       gaaGTCAGGGGGGGGGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATCGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTa                                                                                                       <  1:1004805/142‑1 (MQ=255)                                       cAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGCATTCACCCTTACCTGCTGTGGCGGAAGCGCCTTa                                                                                                       >  2:628324/1‑143 (MQ=255)                                        aaGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTAt                                                                                                      >  2:892995/1‑143 (MQ=255)                                            cAGGAGGCGAGCTACGTCCCCGCAGAAGTTCACGGCTTGTGCGGCGGCGCGCATTTAGGTTACAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGc                                                                                                  <  2:320913/143‑1 (MQ=255)                                                 gTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACa                                                                                             >  2:171271/1‑143 (MQ=255)                                                   cGAGCTACGTCACTGCAGCAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACaaa                                                                                           <  1:1025235/143‑1 (MQ=255)                                                    gAGCGACGTCACCGCAGAAGGGCACGGCGTGTGCGGCGGCGAGCATGTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAAc                                                                                          <  2:975183/143‑1 (MQ=255)                                                      gCTACGGCACCGCAGAAGGGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGc                                                                                        <  1:293629/143‑1 (MQ=255)                                                         aCGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATg                                                                                     >  1:224879/1‑143 (MQ=255)                                                          cGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGa                                                                                    <  2:520518/143‑1 (MQ=255)                                                           gccACCGCACAAGAGCACGCCGTCTGCCGCGGCGAGCACTTAGGTTAAAAAAATGTCAGCTTGTGAAAAGCAACCGGGCATCATTGTGACTTCACGCGTACACGCTGTGGCGTAGTCGCCTTATCCGCCTACAAACGCATGaa                                                                                   <  1:484807/141‑1 (MQ=255)                                                            tCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAg                                                                                  >  1:286537/1‑143 (MQ=255)                                                                cGCAGAAGCGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTc                                                                              <  2:384586/143‑1 (MQ=255)                                                                  cAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCaa                                                                            <  2:1085734/143‑1 (MQ=255)                                                                   aGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAAc                                                                           >  1:192020/1‑143 (MQ=255)                                                                        ggCAGGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGtt                                                                      <  1:608470/142‑1 (MQ=255)                                                                             ggCGTGTGCGGCCGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAAt                                                                 <  2:857382/143‑1 (MQ=255)                                                                                gtgtGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTAAACATGTTGCAATAGa                                                              >  2:660623/1‑143 (MQ=255)                                                                                    gcggcggcgAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGTGCATCATTGGGAATTCGCTCTTACCTGATTTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGAtttt                                                          <  2:796103/143‑1 (MQ=255)                                                                                     cggcggcgAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTg                                                         >  1:170111/1‑143 (MQ=255)                                                                                       gcggcgAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCCACCGGGCATCATTGTGAGTTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGAATGAAGATTCAACATGTTGCCATAgcccttgtc                                                       >  1:39208/1‑135 (MQ=255)                                                                                          gcgAGCACTTAGGTTCAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGc                                                    <  2:76379/143‑1 (MQ=255)                                                                                            gAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTAc                                                                                              >  1:802757/1‑99 (MQ=255)                                                                                            gAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTAc                                                                                              <  2:802757/99‑1 (MQ=255)                                                                                               cATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACACACGCCTGCAGATTCACCATGTTGCAATAGATTTTGTAAGCCTGac                                               >  2:297921/1‑142 (MQ=38)                                                                                               cATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGAt                                               >  2:244030/1‑143 (MQ=255)                                                                                                  ttAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCCACAGATTTTGTAGGCCTGATAAg                                            >  2:175246/1‑143 (MQ=255)                                                                                                      gTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTa                                        >  2:532557/1‑143 (MQ=255)                                                                                                      gTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTa                                        <  2:280791/143‑1 (MQ=255)                                                                                                       ttAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAg                                       >  2:281544/1‑143 (MQ=255)                                                                                                        ttggagagtgtcgggTAGTGAGAAGCACGCCGGCATCATTGTGGATTCACGCTTACCTGATGTGGCGAAAACGCCTTATCCGGCTACAAACGCATGAAGAGTCAACATGTTGCAATAGATTTTGGAGGCCTGATAAGCGTAgc                                      <  1:993825/130‑1 (MQ=21)                                                                                                        tAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGGAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAgc                                      >  2:1086151/1‑143 (MQ=255)                                                                                                           aaaaaTGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCa                                   >  2:800105/1‑143 (MQ=255)                                                                                                             aaaTGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATc                                 <  2:460187/143‑1 (MQ=255)                                                                                                              taTGCTCGTTTGTGAAAAGCAACCGCGCATTATTGTGTATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATGCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCa                                <  2:57316/142‑1 (MQ=25)                                                                                                              actGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCa                                <  2:998416/141‑1 (MQ=255)                                                                                                                    cGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAtt                          <  2:991338/143‑1 (MQ=255)                                                                                                                      gTTGTGAAAAGCAACCGGGCATCATTGTGAATTCCCTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGa                        <  2:847886/143‑1 (MQ=255)                                                                                                                        tgtgAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGc                      <  2:522117/143‑1 (MQ=255)                                                                                                                           gacaaGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCAcc                   <  2:639867/140‑1 (MQ=255)                                                                                                                           gAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTAAACATGTTGAAATAGATTTTGTAGGCCTGATAAGCGTAAGGGAACAGGCATAGAGCaac                   >  1:436980/1‑141 (MQ=25)                                                                                                                            aaaaGCAACCGGGCATCATTGTGAATTCACTCATACCAGAAGAAGCGAACACGCCTTATCCGCCTACAAACACATGAAGATACAACATGATGCAATAGAATCTGTAGGCCTGATAAGCGTAGCGCACCAGGCATTAAGCACCt                  >  1:1116076/1‑143 (MQ=37)                                                                                                                             aaaGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTCGCGCATCAGGCCTCGAGCAccca                 >  2:867613/1‑141 (MQ=255)                                                                                                                                gCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATg              >  1:683762/1‑143 (MQ=255)                                                                                                                                 cAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGc             >  2:1145941/1‑143 (MQ=255)                                                                                                                                  aaCCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCATCATGTTGCAATAGATTTTGTTGGCCTGATAAACGTAGCGCATCAGGCATTGAGCACCTAATGcc            >  2:43859/1‑143 (MQ=255)                                                                                                                                   aCCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGCTTTTGTTCTCCACATAATCGTTGCGCCTCACCCATTGAGCACCTCATGCCg           >  2:1188282/1‑143 (MQ=25)                                                                                                                                    ccGGGCATCCTTTTGAATTCCCTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCgg          <  1:325940/143‑1 (MQ=255)                                                                                                                                     ccggCATCATTGTGAAATCACGCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGa         <  2:602113/141‑1 (MQ=255)                                                                                                                                     cGGGCATCATGGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCATATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGa         <  2:223986/143‑1 (MQ=255)                                                                                                                                      gggCATCGTTGTTATGCCACTCGTACCTGAGGCGGCGAAAGCGCCTTATCCGCCTACAAACGCATGAAGATACAACATGGTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGAt        <  2:372287/143‑1 (MQ=21)                                                                                                                                      gggCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCTTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGAt        >  2:676520/1‑143 (MQ=255)                                                                                                                                       ggCATCATTGTGAATTCACACTCACGAGATGGGGCGAACACGCCGCATCCGCCTACAAACGCATGAAGATTCAACATGTTGCCATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATg       <  2:443824/143‑1 (MQ=38)                                                                                                                                        gCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGc      <  2:900364/143‑1 (MQ=255)                                                                                                                                          atcatTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGcgt    <  1:10082/143‑1 (MQ=255)                                                                                                                                            catTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGcgtcg  <  2:718655/143‑1 (MQ=255)                                                                                                                                            |                                                                                                                                               GCAACCGGCGGAACTGGCCCCTGTATATGTTTATCTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTGAGCACCTAATGCCGGATGCGTCG  >  NC_000913/3150439‑3150720

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.