| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4528523 = | 49 (0.910) | 4 (0.080) | 4/274 | 7.5 | 8.5% | coding (396/807 nt) | sgcQ | putative nucleoside triphosphatase |
| ? | NC_000913 | 4528543 = | 38 (0.720) | coding (376/807 nt) | sgcQ | putative nucleoside triphosphatase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CAATTAATGAGCGATATCCGCATCCCGTTTGGCGTGAATGTTCTGTGGGATCCGGTCGCCTCATTCGACCTGGCGATGGCTACCGGCGCTAAGTTTATCCGCGAGATATTTACCGGTGCCTATGCCAGCGACTTTGGCGTCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4528666‑4528523‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggCATAGGCACCGGTAAATATCTCGCGGATAAACTTAGCGCCGGTAGCCATCGCCAGGTCGAATGAGGCGACCGGATCCCACAGAACATTCACGCCAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGC > NC_000913/4528543‑4528681 CAATTAATGAGCGATATCCGCATCCCGTTTGGCGTGAATGTTCTGTGGGCTCCGGTCGCCTCATTCGACCTGGCGATGGCTACCGGCGCTAAGTTTATCCGCGAGATATTTACCGGTGCCTATGCCAGCGACTTTGGCGTCTG < 2:32890/143‑1 ATATTTACCGGTGCCTATGCCAGCGACTTTGGCGTCTGGCATAGGCACCGGTAAATAT < 1:478782/58‑1 ATATTTACCGGTGCCTATGCCAGCGACTTTGGCGTCTGGCATAGGCACCGGTAAATAT > 2:478782/1‑58 CCAGCGACTTTGGCGTCTGGCATAGGCACCGGTAAATATCTCGCG < 1:844704/45‑1 CCAGCGACTTTGGCGTCTGGCATAGGCACCGGTAAATATCTCGCG > 2:844704/1‑45 CTGGCATAGGCACCGGTAAATATCTCGCGGATAAACTTAGCGCCGGTCGCCATCGCCAGGTCGAATGAGGCGATCGGGACGCACAGTACGTTCGCGCCAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTggcga > 1:717040/1‑138 CAATTAATGAGCGATATCCGCATCCCGTTTGGCGTGAATGTTCTGTGGGATCCGGTCGCCTCATTCGACCTGGCGATGGCTACCGGCGCTAAGTTTATCCGCGAGATATTTACCGGTGCCTATGCCAGCGACTTTGGCGTCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4528666‑4528523‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggCATAGGCACCGGTAAATATCTCGCGGATAAACTTAGCGCCGGTAGCCATCGCCAGGTCGAATGAGGCGACCGGATCCCACAGAACATTCACGCCAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGC > NC_000913/4528543‑4528681 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |