| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 257908 = | NA (NA) | 34 (0.830) | 31/284 | 0.3 | 94.4% | intergenic (+9/‑768) | crl/crl | pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator,regulator, Surface structures, transcriptional regulator of cryptic csgA gene for curli surface fibers/pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator,regulator, Surface structures, transcriptional regulator of cryptic csgA gene for curli surface fibers |
| ? | NC_000913 | = 1293039 | 2 (0.050) | intergenic (‑117/‑488) | hns/tdk | global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase | |||||
TTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGAC > NC_000913/1292897‑1293179 | ttCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTCTTTTGTgccg > 1:396845/1‑143 (MQ=255)ttCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGAGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTgccg > 1:373880/1‑143 (MQ=255) aGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggt < 2:444738‑M2/143‑4 (MQ=255) cggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTCgcgccgccca < 1:19644‑M1/12‑3 (MQ=255) gtggtggttttgccgtgacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCaata > 1:681780‑M1/130‑143 (MQ=255) cggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCaataa > 2:142668‑M1/129‑143 (MQ=255) tttAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatga > 1:92088‑M2/1‑135 (MQ=255) ttAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgac > 2:523394‑M2/1‑134 (MQ=255) ttttgccgttacgcaccaccccgacagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCt < 2:102933‑M1/21‑1 (MQ=255) tttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCACTACATATCtt < 1:91902‑M1/22‑1 (MQ=255) ttCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaactt > 2:16838‑M2/1‑126 (MQ=255) gccgggacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTc > 2:278159‑M1/119‑143 (MQ=255) gttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATa < 1:38461‑M1/28‑1 (MQ=255) gCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAAAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTATGCCGggtaatcactccaccttctt < 1:701787‑M2/143‑21 (MQ=255) ttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTCTGCCGCCAATAAATCTCTTTTCATaa < 2:277127‑M1/29‑1 (MQ=255) tCATTGTAGTAAGCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattga > 2:315716‑M2/1‑121 (MQ=255) ccgcaccaccccgtcagtagctgaacaggaggcacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATaaaa > 2:405905‑M1/113‑143 (MQ=255) acgcaccaccccgtcagtagctgaacaggagggacagctgatagcaacagaagccactggagcacctcaaaaacaccatcatccactaactcagtaagttggcagcatcaccTTGTGCCGCCAATAACTATCTTTTCATaaaa > 1:15493‑M1/113‑143 (MQ=255) ttGTAGTAATCTCAAACTTATATTGGGGTTGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatag > 1:40990‑M2/1‑118 (MQ=255) accaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATACAATTAg < 2:597020‑M1/35‑1 (MQ=255) cacgccgtcggtggctgtagaggagggacagctgatagaaacagaagccagtggagcacttgaataacaccatcatacactacatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGcc > 1:467962‑M1/107‑143 (MQ=255) caccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCaataaat < 1:432189‑M1/17‑1 (MQ=255) caccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCaataaat > 2:432189‑M1/107‑123 (MQ=255) aTCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCACTAGCCAGGCATGTAAGGAATTCACACTTGTTCTTTATTTTGTGCCGggtaaagactacaacaaaatgatagtgtgttat < 2:316016‑M2/143‑34 (MQ=255) cgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGaaa < 2:627753‑M1/42‑1 (MQ=255) tcAAATTTATATGGGGGTGGTTTGTTGAGGTAATCATTGGGCCTTAAATGCAGTTGTGCAATAGCCAGGAATGTAAGGAATCCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgtt > 1:91545‑M2/1‑107 (MQ=255) tcAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgtt < 1:152080‑M2/143‑37 (MQ=255) atactGATATGGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAGTGGGTCTTTATGTTGTGCCGggtaatgacgccaacttattgatagtgttttatgttca > 2:204545‑M2/3‑105 (MQ=255) aaCTTATAGTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcag > 1:196479‑M2/1‑104 (MQ=255) tagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactacatcagtaagttggcagcatccccTTGTGCCGCCAATAAATATCTTGTCATAAAATTAGCCAGAAAAgactc < 1:303246‑M1/48‑3 (MQ=255) agctgaaccggagagatagctgacaagatcagcatccactggagcacgtcaaaaacaccatcatacactaaatcattaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGAcgcg > 1:343834‑M1/95‑143 (MQ=255) atgaggggggtttgGTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgc > 1:372157‑M2/5‑97 (MQ=255) aacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTGTCATAAAATTAGCCAGAGAAGCCGCGgcaga < 2:203625‑M1/54‑3 (MQ=255) cagtagggacagctgatagaaacagaagccactggagcatctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCAtata > 1:458035‑M1/88‑143 (MQ=255) gagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTGCATAAAATTAGCCAGAAAAGACGCGGCATATGGcc < 2:269923‑M1/59‑1 (MQ=255) gggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCt < 2:567978‑M1/61‑1 (MQ=255) gacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGCAAACACGCGGCATATAGCCCtac < 1:655457‑M1/63‑2 (MQ=255) ttgttgAGGTAATCATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgacttt > 2:416236‑M2/1‑86 (MQ=255) cagcggatagaaacagaagccactggcgcacctcaaaaacaccatcatacactaaagcagtaagttggcagcatcaccGTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAttt > 1:705278‑M1/79‑143 (MQ=255) agctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTa < 1:321309‑M1/66‑1 (MQ=255) gttgAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgt > 2:662850‑M2/1‑84 (MQ=255) ctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCctatttcca < 1:204858‑M1/68‑4 (MQ=255) tgatagcaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTacac > 2:74961‑M1/75‑143 (MQ=255) gAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcat < 2:508406‑M2/143‑63 (MQ=255) agaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATATCCCTATTTACACCgat < 1:522859‑M1/73‑1 (MQ=255) ataataCTGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAAGTGTTCTTTATTTTGTGCCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagct > 1:24386‑M2/1‑75 (MQ=255) agagCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccacc < 2:713933‑M2/143‑74 (MQ=255) aagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCgc > 2:277569‑M1/63‑143 (MQ=255) gagCCTTAAATTCAGTTGTGCAATAGCCAGGAGTGTAAGGAATTCAAAATTGTTCTTTCTGTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcaggtccaccg < 2:341941‑M2/143‑75 (MQ=255) agccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCgca > 1:102933‑M1/62‑143 (MQ=255) actggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATCGCCCTATTTACACCGATGATtttgcagtac < 2:591479‑M1/86‑4 (MQ=255) tAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactgccacatatggatagtgttgcacggtctgataatgcccgatgactttgtcatgcagctccaccgattttg < 2:195491‑M2/143‑81 (MQ=255) tgattCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttga > 1:555317‑M2/3‑62 (MQ=255) gaagcaccacaaaaacaccagcatacactaaatcagtaaggtggcagcatcaccTTGTGCCGCCAATAAATATCTGTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTg > 2:203715‑M1/55‑143 (MQ=255) gagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAGAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGcacgaga < 2:406443‑M1/90‑4 (MQ=255) acctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGtt < 2:568525‑M1/94‑1 (MQ=255) ttGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgaca > 2:538450‑M2/1‑54 (MQ=255) tcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTaaa > 2:38461‑M1/47‑143 (MQ=255) tcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTaaa < 1:392270‑M1/97‑1 (MQ=255) tcaaaaacaccatcatacactaaatcaataagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATAACGCAGCACGAGAGGCTaaa < 1:435357‑M1/97‑1 (MQ=255) caaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTaaaa < 2:570881‑M1/98‑1 (MQ=255) cAATAGCTAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgcatttgtccgacagcgccaccgattttgagaacgacagcgac < 2:484389‑M2/143‑95 (MQ=255) cAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtagtgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaacgctttttagaacgacagcgcc < 1:410637‑M2/143‑95 (MQ=255) aGCCAGTAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGagtaatgactccaacttattgcttgtgtgttattttcagataattcccgatgactttgtcatgcagctactccgattttgagaacgacagcgacttcc > 1:151830‑M2/1‑45 (MQ=255) aGCCAGTAACGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttcc > 2:315313‑M2/1‑45 (MQ=255) aGACACGAATCTATGGACGTCAAAATTTTTCTTTCTTTTGTCGCGggttatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttcc > 1:205045‑M2/1‑45 (MQ=255) gCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgaaaacgacagcgtcttccg < 2:431572‑M2/143‑100 (MQ=255) ccAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgt > 2:155374‑M2/1‑43 (MQ=255) cctaaatcagtaagttggcagcatcaccGTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTca > 1:93035‑M1/29‑143 (MQ=255) actaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTca < 2:654531‑M1/115‑1 (MQ=255) aatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTCAAAACTTCCTGATTCATgtcacaat < 2:74807‑M1/119‑3 (MQ=255) aGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttctgttcagataatgcccgatgactttgtcatgcagctacaccgattttgagaacgacagcgacttccgtcccagccgtgc < 2:185675‑M2/143‑112 (MQ=255) aaTTTAACATTGTCCTTTATTTTGCGCCGggtaatggctctaacttattgatcgtgttttatgttcagatcatgcccaatgcctttgtcatgcagctccgccgattttgagaacgacagcgacttccgtcccagccgtgccag > 1:471720‑M2/1‑29 (MQ=255) agtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCCCATTTTAt < 2:605925‑M1/123‑1 (MQ=255) aTTCAAATGTGTTCTTTATTTTGTGCCGggtaatgtctccaacttattgatagtgttttatgttcagataatgtctgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtctcatccgtgccagg > 1:157665‑M2/1‑28 (MQ=255) ttCAAAAATGTTCGTGATTTCCTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgccccattactttgtcatgcagctccaccgattttgagaacgatagcgacttccgtcccagccgtgccaggt > 2:79379‑M2/1‑27 (MQ=255) gtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTATATg < 1:402713‑M1/124‑1 (MQ=255) taagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATgg < 2:117062‑M1/125‑1 (MQ=255) taagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATgg > 2:220577‑M1/19‑143 (MQ=255) gatgtggagttattttgtgcCGgggaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgc > 2:85021‑M2/10‑22 (MQ=255) agcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTc < 1:189175‑M1/109‑1 (MQ=255) agcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTc > 2:189175‑M1/10‑118 (MQ=255) gcatcaccTGGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATc > 1:553778‑M1/9‑143 (MQ=255) accTGGTGCCGCCAATAAATATCTATTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAgg > 2:604518‑M1/4‑143 (MQ=255) ccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGc > 2:655457‑M1/3‑143 (MQ=255) gccgccAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTCAATCAAGTTAGTGTTTTTGGGGAGATTATCGTAGGCTgacga > 2:297857/1‑143 (MQ=255) ccgccAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGACGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTgacgac > 1:334529/1‑143 (MQ=255) | TTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGAC > NC_000913/1292897‑1293179 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |