New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 60941539 (0.950)3 (0.080) 3/268 5.8 7.6% intergenic (+238/+44) insL1/entD IS186 transposase/phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex
?NC_000913 = 609431 36 (0.930)intergenic (+254/+28) insL1/entD IS186 transposase/phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGCAAACATCTCATTCTCACGATGAATGATGACCTGCTGTTTATTCCAGCTAA  >  NC_000913/609291‑609565
                                                                                                                                            |                                                                                                                                      
aCGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCg                                                                                                                                      >  1:295614/1‑143 (MQ=255)
     gCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGa                                                                                                                                 >  1:92645/1‑143 (MQ=255)
          gAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGt                                                                                                                            >  1:292093/1‑143 (MQ=255)
           aGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTa                                                                                                                           <  2:376641/143‑1 (MQ=255)
             gtgTCGTATTCTTCAGATGGTGCCGCCCGTAAGTGAGCGCGCATGGGAGTAAGCCGGGCATATCCGGTTGTCAGGTTAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTAcc                                                                                                                         <  2:238924/141‑1 (MQ=255)
                 cgtagtcttcACGTGGTGCGACCCTCAAGTGCGCGGTTCAGGGAGTAGTCACCGCCTATCCGGGTGTCAGGTCAGGATGGTAAGGCCCCTGCTTTACGCTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGAt                                                                                                                     <  2:688858/138‑1 (MQ=255)
                 cGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAACCCCCGCATATCCGGTTGTCAGGTCAGGATGGCAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGAt                                                                                                                     <  2:237318/143‑1 (MQ=255)
                    aTTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGAtgtt                                                                                                                  >  2:161469/1‑143 (MQ=255)
                       cttcAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCAGTGGTCAGTGATGGCTGCGGGCGAATCGTACCGGAggttggc                                                                                                               >  1:493791/1‑141 (MQ=255)
                            gATGGTTCAAGCCTTGAGGTAGCGATTATGGGAGTAGTCCCCGCATGTCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTa                                                                                                          <  1:656740/143‑1 (MQ=255)
                             aTGGTTCAACCCTTAAGTTAGCGCTTATGGAAGTAATCACCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGAGGGCTGCGGGCGAATCGTACCAGATGTTGTCAAttca                                                                                                         >  1:8712/1‑141 (MQ=255)
                                 ttCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCgt                                                                                                     >  2:317794/1‑143 (MQ=255)
                                       ccTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGCCAATTAAACGTGTTGGc                                                                                               >  1:598625/1‑143 (MQ=255)
                                        cTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTGAATTAATCGTGTTGGca                                                                                              >  1:653900/1‑143 (MQ=255)
                                         ttAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGcac                                                                                             >  2:507378/1‑143 (MQ=255)
                                                          ggAGTAATCACCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGGGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTAGGAGTAtcat                                                                            >  1:687079/1‑141 (MQ=255)
                                                              tAATCCCCGCATACCCGGTCGTCGGGTCAGGATGGTAAGACACCCACTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTAtcttttct                                                                        <  2:59511/143‑1 (MQ=255)
                                                               aaTCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTGTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTAccttttcct                                                                       <  1:124286/143‑3 (MQ=255)
                                                                aTCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTAtcttttcttt                                                                      <  2:292093/143‑1 (MQ=255)
                                                                 tCCCCGCATATCCGGTTGCCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATcttttctttt                                                                     <  2:295614/143‑1 (MQ=255)
                                                                    ccGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGCTGTTGTCAATTAATCGTGTTGGCACAGCGTTATGCCTATCTTTTCTTTTATc                                                                  >  2:696101/1‑143 (MQ=255)
                                                                            ccGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTg                                                          <  2:92645/143‑1 (MQ=255)
                                                                              ggatGTCAGGTCAGGAGGGTAAGGCACCTGCGTTACACTTTCGCCCGGGGTAAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCAGAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGca                                                        <  2:208384/140‑1 (MQ=255)
                                                                              ggTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTACTCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGACAGTGca                                                        >  2:32416/1‑143 (MQ=255)
                                                                                       gtcaggATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCACTGCACAGCAAACa                                               >  1:205052/1‑143 (MQ=255)
                                                                                            gATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGCAAACATCTCa                                          <  2:690082/143‑1 (MQ=255)
                                                                                                     tcatcTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGCAAACATCTCATTCTCACGa                                 <  2:631160/139‑1 (MQ=255)
                                                                                                     gCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACACCAAAGATCTCATTCTCGCGa                                 >  2:460191/1‑143 (MQ=255)
                                                                                                         cTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACCGCGTTATGACTATCTTTTCTTTTATCTGCCAGTTCCCCGCAAACATCTCATTAACACGatgaa                             >  2:39786/1‑143 (MQ=255)
                                                                                                          tGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGAGAATCGTACCAGATGTTGTCAATGAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCAAAGCAAACATAGCAATCTCACGatgaat                            >  1:218422/1‑143 (MQ=255)
                                                                                                                  acTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGCATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATAACTATCTATTCTTTTATCTGCCAGTGCACACCAAACATCTCATTCTCACTATGCATGATGACct                    >  2:598359/1‑143 (MQ=255)
                                                                                                                    tttCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGGTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGCAAACATCTCATTCTAACGATGAATGATGACctgc                  >  2:90717/1‑143 (MQ=255)
                                                                                                                     ttCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGCAAACATCTCATTCTCACGATGAATGATGACctgct                 >  2:355391/1‑143 (MQ=255)
                                                                                                                          ccGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGCAAACATCTCATTCTCACGATGGATGATGACCTGCTGTTTa            >  1:570434/1‑143 (MQ=255)
                                                                                                                            gTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGCAAACATCTCATTCTCACGATGAATGATGACCTGCTGTTTAtt          >  2:468193/1‑143 (MQ=255)
                                                                                                                               gTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGCAAACATCTCATTCTCACGATGAATGATGACCTGCTGTTTATTCCa       <  1:161469/143‑1 (MQ=255)
                                                                                                                                tcggTGATGGCTGCGGGCGAATTGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGCAAACATCTCATTCTCACGATGAATGATGACCTGCTGTTTATTCCAg      <  2:324551/140‑1 (MQ=255)
                                                                                                                                    tGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTACCAGTGCACAGCAAACATCTCATTCTCACGATGAATGATGACCTGCTGTTTATTCCAGCTac  >  2:362976/1‑142 (MQ=255)
                                                                                                                                            |                                                                                                                                      
ACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGCAAACATCTCATTCTCACGATGAATGATGACCTGCTGTTTATTCCAGCTAA  >  NC_000913/609291‑609565

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.