New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1207790 =17 (0.370)43 (1.050) 39/252 0.1 78.1% coding (290/630 nt) stfP e14 prophage, uncharacterized protein
?NC_000913 1209619 = 9 (0.220)pseudogene (1/501 nt) stfE pseudogene, e14 prophage, side tail fiber protein fragment family,Phage or Prophage Related

Only 100 of 110 total aligned reads displayed.

GTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCC  >  NC_000913/1207648‑1207932
                                                                                                                                              |                                                                                                                                               
ctgcacagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgtaaatcgtggagaatgtcttcattttcataaacgt                                                                                                                                                 <  1:716811‑M1/1‑1 (MQ=255)
 tgcacagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttattccttcattttcataaacgtt                                                                                                                                                <  2:506568‑M1/2‑1 (MQ=255)
  ggtggAGGCCGCGGGGGCTCGCGTGGAGGAGGGTCGGCACGAGCAGTTACTTACCGCGCTCGGCGCGCTGCTGTTAGGCCGGAAGCATCCGCTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTg                                                                                                                                               <  2:264566/143‑1 (MQ=255)
  ggtggAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTG                                                                                                                                               <  1:744076‑M1/143‑1 (MQ=255)
      gAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAACCCTTGGTTT                                                                                                                                           >  1:167467‑M1/1‑143 (MQ=255)
        gtcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTgg                                                                                                                                        >  1:703541‑M1/135‑143 (MQ=255)
        ggCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGG                                                                                                                                        <  2:383346‑M1/143‑1 (MQ=255)
        ggCATCCGGTGCCAGCCGGGAGACGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGGTGGCGCTGTGCAAACGGCTCTCGAAAACCTTGGTTTGG                                                                                                                                        <  2:702235‑M1/143‑1 (MQ=255)
          taggcggggCCAGGCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCGGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA                                                                                                                                      <  1:289918‑M1/139‑1 (MQ=255)
          cATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA                                                                                                                                      <  2:494458‑M1/143‑1 (MQ=255)
           agcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGgag                                                                                                                                     <  1:68812‑M1/12‑1 (MQ=255)
            gcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGgaga                                                                                                                                    <  2:437724‑M1/13‑1 (MQ=255)
               cattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGCTTGGGAGAAgg                                                                                                                                 <  2:40335‑M1/16‑1 (MQ=255)
                gagCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGa                                                                                                                                >  1:373231/3‑143 (MQ=255)
                 tGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAACCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGct                                                                                                                               <  1:695030‑M1/143‑3 (MQ=255)
                     aGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCGTGGTTTGGGAGAAGGAGCaaa                                                                                                                           >  2:638277/1‑143 (MQ=255)
                       tgtagatctgtgttctggtcattcgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcatattcataaacgTTGGTTTGGGAGAAGCACCAAAAc                                                                                                                         <  2:350064‑M1/24‑1 (MQ=255)
                        gtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACt                                                                                                                        <  1:693217‑M1/25‑1 (MQ=255)
                          agatctgtgttctggtcagttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGGaggagcaagaatca                                                                                                                      <  1:11001‑M1/27‑7 (MQ=255)
                           gatctgtggtctgggcatttggtgatacgcgtacagaggcaataagcatggtagagccccctggtaaaaggaggaatgatgccatttggtggttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCaa                                                                                                                     >  2:334977‑M1/116‑143 (MQ=255)
                           gagaAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCaa                                                                                                                     <  1:142016/143‑1 (MQ=255)
                              aaGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgt                                                                                                                  <  1:383291‑M1/143‑16 (MQ=255)
                               tgtgttcgggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATgca                                                                                                                 >  2:142342‑M1/112‑143 (MQ=255)
                               aGGGGCGGCACGAGCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcatcacctgtt                                                                                                                 <  2:718230‑M1/143‑17 (MQ=255)
                                gtggctgcaaGACCAGTTACGTAGCGCGCGTCGCGCGCTGGCGGTAAGCCGCAAGAATCCGTTTGGCGATATCAGATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttg                                                                                                                <  1:323231‑M1/141‑18 (MQ=255)
                                gtggcggcacGACCAGTTACTTATCGCTCTTCGTGCGCTGCTGTTAAGCCGCAAGAAGCCGTTGGGCGATAGCAAATCGGAGGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttg                                                                                                                <  1:317981‑M1/141‑18 (MQ=255)
                                ggggCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTACGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttg                                                                                                                <  2:601848‑M1/143‑18 (MQ=255)
                                ggggCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAACCCATGGTTTGGGAGAAGGAGCAAAACTCAATgcag                                                                                                                >  2:219201/1‑143 (MQ=255)
                                ggggCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGCTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttg                                                                                                                <  1:34580‑M1/143‑18 (MQ=255)
                                ccggcggcacGACCTGTTACTTACCGCACGTCTCCCGCTGCTGTTAAGCCGTAAGGATCCGTCTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttg                                                                                                                <  2:1591‑M1/141‑18 (MQ=255)
                                   ttctggtcatttgttgatacacgtacatagccaataagcatgttaaatacccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgATGATTTGGGAGACGGCGAAACACGCATTGCAGCaa                                                                                                             <  2:273725‑M1/36‑1 (MQ=255)
                                    tctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggcatgatgccatttgcttgttatttcttcattttcataaacgCTGGTTTGGGAGAAGGAGCAGAACTCAATGCTGCAAc                                                                                                            <  1:9873‑M1/37‑1 (MQ=255)
                                        aCGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccg                                                                                                        <  2:190849‑M1/143‑26 (MQ=255)
                                          catttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaaagTTGGTTTGGGAGAAGGAGCAAAAATCAATGCAGCAACGGCTAc                                                                                                      <  2:204995‑M1/43‑1 (MQ=255)
                                            tttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCCATGCAGCAACGGCTACAt                                                                                                    <  2:24798‑M1/45‑1 (MQ=255)
                                             cAGTTACTTCCCGTACTTCGCGCGCTGCTGTTTAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttcc                                                                                                   <  2:468704‑M1/143‑31 (MQ=255)
                                               gTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATAGCAAATCGGATGGCACTGTGCAAAATGCTCTCGAAAAACAAGGTGTGAGAGAAGGctctgcattacctgttggtgtcccggttccgt                                                                                                 >  1:716974‑M1/1‑111 (MQ=255)
                                                ttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAAATCAATGCAGCAACGGCTACAGTAgg                                                                                                <  2:35657‑M1/49‑1 (MQ=255)
                                                 tgatatgcgaacataaccaataagcatgttaaatccccctggtaaatgcaggaatgatgccatttgcttgttatttcttcattttcagaaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGa                                                                                               >  2:592051‑M1/94‑143 (MQ=255)
                                                 tgatacgcgtaggtagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGa                                                                                               >  2:106725‑M1/94‑143 (MQ=255)
                                                    tacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGc                                                                                            >  1:242191‑M1/91‑143 (MQ=255)
                                                      acCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTG                                                                                                                                               <  1:424223‑M1/91‑1 (MQ=255)
                                                       gcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCAcc                                                                                         <  1:596171‑M1/56‑1 (MQ=255)
                                                       ccGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCAcc                                                                                         >  1:187473/1‑143 (MQ=255)
                                                        cGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGCCGCACCg                                                                                        >  1:656447/1‑143 (MQ=255)
                                                        cGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGCTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcag                                                                                        >  2:336170‑M1/1‑102 (MQ=255)
                                                          tacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttattgcttcatactcataaacgTTGGTTTGGGAGAAGGAGCAAAACTGAATGCAGCAACGGCTACGGTAGGAAGCACCGGt                                                                                      <  2:132025‑M1/59‑1 (MQ=255)
                                                           acatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGtt                                                                                     >  2:330648‑M1/84‑143 (MQ=255)
                                                             atagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTc                                                                                   >  1:660501‑M1/82‑143 (MQ=255)
                                                                gcgcgcTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGCAAACCTTGGCTTGGGAGAAGGctctgcatttcctgttggtgtcccggtgccgtgaccttgagccgctctg                                                                                >  2:466391‑M1/1‑94 (MQ=255)
                                                                 cgcgcTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgc                                                                               >  1:428486‑M1/1‑93 (MQ=255)
                                                                  gcgcTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgcc                                                                              >  1:774945‑M1/1‑92 (MQ=255)
                                                                    ataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATACAGCAACGGCTACATTAGGACGCACCGGTTTCATAACta                                                                            <  2:492983‑M1/69‑1 (MQ=255)
                                                                      tgctgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGcgctgcattaccagttggtgtcccggttccgtagcctgccgccactccgccaaca                                                                          >  1:493097‑M1/1‑88 (MQ=255)
                                                                          atgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCgg                                                                      <  1:186844‑M1/75‑1 (MQ=255)
                                                                            gttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGtt                                                                    >  2:66465‑M1/67‑143 (MQ=255)
                                                                             ttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTa                                                                   <  1:170498‑M1/78‑1 (MQ=255)
                                                                              aGCCGCAAGAGTCCGTTTGGCGATATCGAGTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggct                                                                  <  2:599512‑M1/143‑64 (MQ=255)
                                                                                ccGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgg                                                                >  1:21641‑M1/1‑78 (MQ=255)
                                                                                    cccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtgg                                                            <  1:625708‑M1/85‑1 (MQ=255)
                                                                                    aaGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatg                                                            <  2:619519‑M1/143‑70 (MQ=255)
                                                                                     ccctggtaaaagcaggaatgatgccatttgcttgttatttcttcgttttcatcaacgTTGGTTTGGGAGAGGTAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGTACCTGTTTCATAGCTATACCGGTTATGATtggt                                                           >  2:15768‑M1/58‑143 (MQ=255)
                                                                                      cctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggtg                                                          >  1:465441‑M1/57‑143 (MQ=255)
                                                                                          ccGTTTGGCGATATCAAGTCGGATGGCACTGTGCAAACGGCTCTCGAAGGTAGGCTTTGTGGAGAAGGctctgcgttacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatgg                                                      <  1:584599‑M1/143‑76 (MQ=255)
                                                                                           taaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGAGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTAtt                                                     <  1:156851‑M1/92‑1 (MQ=255)
                                                                                           cGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACCCCTTGTGGTCATAGCTATACCGGTTATGATTGGTGGTAtt                                                     >  2:565343/1‑143 (MQ=37)
                                                                                             aaagcaggatggatgccatatgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGa                                                   >  1:712838‑M1/50‑143 (MQ=255)
                                                                                             aaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGa                                                   >  2:159532‑M1/50‑143 (MQ=255)
                                                                                              ttGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGAAGAAGGAGCAAAGCTCAATGCACCAACGCCTACATTCGGACGCACCGGTGTCATAGCTACACCGGCTCTGATCGGTGCTagtcag                                                  >  1:258273/1‑138 (MQ=25)
                                                                                              aagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAg                                                  >  2:596171‑M1/49‑143 (MQ=255)
                                                                                               agcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGGCGCACCGGTTTCATAGCTATACCGGTTATGATTGGCGGTACTGAGc                                                 <  2:525166‑M1/96‑1 (MQ=255)
                                                                                                   ggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCACTGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATc                                             >  2:106727‑M1/44‑143 (MQ=255)
                                                                                                    atatCAAAGCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATGAGGACGCACCGGTGTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCa                                            <  1:159288/143‑1 (MQ=255)
                                                                                                        gatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTCTTGAGCAACCAGTaa                                        <  1:792102‑M1/105‑1 (MQ=255)
                                                                                                        gatgccatttgcgtgttatttcttcattttcataatcgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTaa                                        >  1:105325‑M1/39‑143 (MQ=255)
                                                                                                        cAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctg                                        >  1:241703‑M1/1‑54 (MQ=255)
                                                                                                         aaaTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTATGGGAGAAGGctctgcattacctgttggtaacaaggatgcgttgccttcagccgctccgccaacagactggctgaaatgcaatggtgccgctttttctgc                                       >  1:800449‑M1/1‑53 (MQ=255)
                                                                                                          aaTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggcggcaatgcagtggtgccgcgttttcggcg                                      >  1:54818‑M1/1‑52 (MQ=255)
                                                                                                          aaTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggcgggctggaatgcaagggtgccgctttttctgct                                      >  1:236339‑M1/1‑52 (MQ=255)
                                                                                                           aTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgccatggtgccgctttttctgctg                                     >  1:563395‑M1/1‑51 (MQ=255)
                                                                                                                   gCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatac                             <  1:79497‑M1/143‑101 (MQ=255)
                                                                                                                    cACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcgatggtgccgccttttctgctgaagaataac                            >  1:317408‑M1/1‑42 (MQ=255)
                                                                                                                     tgtgattttttcattttcctagacgTGGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAATGGCTACATTAGGATGCAGCGGTCTCATAGCTATACCGGTTATGAGTGGTGGTATTGAGCAATCAGTAATCATTCAGTgggg                           >  2:630563‑M1/26‑143 (MQ=255)
                                                                                                                      cTGTGCTAACGGCTCCCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccg                          <  1:91646‑M1/143‑104 (MQ=255)
                                                                                                                        tatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTg                        <  1:573092‑M1/121‑1 (MQ=255)
                                                                                                                        tatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTg                        >  2:145333‑M1/23‑143 (MQ=255)
                                                                                                                          gCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGa                      >  1:165584/1‑143 (MQ=255)
                                                                                                                              ttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGGTTCATAGCTATACCGGTTATGATTGGTGGTGTTGAGCGATCAGTAATCATTCAGTGGGGGGGGAATGc                  <  1:252968‑M1/127‑1 (MQ=255)
                                                                                                                              ttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGGTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGc                  <  1:530296‑M1/127‑1 (MQ=255)
                                                                                                                               ttagtttcatagacgTTGCTGTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACTGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGcc                 >  2:503582‑M1/16‑143 (MQ=255)
                                                                                                                               cGGCTCTCGAAAACGTTGGTTTGGGAGAAGGAGCAAGACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGcc                 <  2:456214/143‑1 (MQ=255)
                                                                                                                                   tttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCaa             <  1:592116‑M1/132‑1 (MQ=255)
                                                                                                                                    ctcGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggc            >  1:42291‑M1/1‑26 (MQ=255)
                                                                                                                                       gAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggcacggccgaaggctta         >  1:100481‑M1/1‑23 (MQ=255)
                                                                                                                                       gAAAACCTTGGTTTGGGAGAAGAAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGCTGAAGAGATATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATAATTCAGTGGGGGTGGAAGGCGGAGAAAGc         >  2:155604/1‑143 (MQ=255)
                                                                                                                                        taaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCACCGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATGGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCa        <  2:101772‑M1/137‑1 (MQ=255)
                                                                                                                                        aaaaCCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttat        >  1:791986‑M1/1‑22 (MQ=255)
                                                                                                                                         aaacgTTGGGTTGGGAGAAGGGGCAAGACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTGCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCAt       >  1:202519‑M1/6‑143 (MQ=255)
                                                                                                                                             gTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGTTGGAATGCCGCAAAAGCATCTGc   <  1:392438‑M1/142‑1 (MQ=255)
                                                                                                                                              TTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCACACGCATCTGcc  <  1:105177‑M1/143‑1 (MQ=255)
                                                                                                                                              |                                                                                                                                               
GTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCC  >  NC_000913/1207648‑1207932

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.