New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1979486 =1 (0.020)76 (1.640) 48/284 0.0 98.7% intergenic (‑271/‑267) insA/uspC IS1 repressor TnpA/universal stress protein
?NC_000913 2101749 = NA (NA)intergenic (‑5/+146) wbbL/insH1 pseudogene, lipopolysaccharide biosynthesis protein/IS5 transposase and trans‑activator

Only 100 of 114 total aligned reads displayed.

GCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGTGATTG  >  NC_000913/1979344‑1979628
                                                                                                                                              |                                                                                                                                              
tggggataacgccttaaatggcgaagaaacgggctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccc                                                                                                                                                >  1:515325‑M1/143‑143 (MQ=255)
 ggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCt                                                                                                                                               <  1:523950‑M1/2‑1 (MQ=255)
 ggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCt                                                                                                                                               >  2:430692‑M1/142‑143 (MQ=255)
 gggcataacgccttacatggctaacaaacggtctaaataggctgattcaaggcatttacgggagaaaaaaccggcgcagacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCt                                                                                                                                               >  1:615328‑M1/142‑143 (MQ=255)
   ggatcacgccgtaaagggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaattcccccgcttattcgcaccttccCTaa                                                                                                                                             >  1:767281‑M1/140‑143 (MQ=255)
   ggataacgccttaaatggctaaggaacgggctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa                                                                                                                                             >  2:427866‑M1/140‑143 (MQ=255)
   ggataacgccttaaatggcgaagaaacggtctaaataggcttattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagacagccgagaagaatttcaccgcttattagcaccttccCTaa                                                                                                                                             <  2:702871‑M1/4‑1 (MQ=255)
   ggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa                                                                                                                                             >  1:682193‑M1/140‑143 (MQ=255)
   ggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa                                                                                                                                             >  1:42132‑M1/140‑143 (MQ=255)
   aaaaTGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTaa                                                                                                                                             <  2:543631/143‑1 (MQ=255)
    gataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAt                                                                                                                                            >  1:484599‑M1/139‑143 (MQ=255)
     ataacgacttaaagtgcgaagaaacggtctaaataggctgattcaaggcatttacgggaggaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccctaagt                                                                                                                                           >  2:480408‑M1/138‑141 (MQ=255)
        acggcttaaatggcgaagcaagggtcgaagtaggcggattcaaggcatttacgggagaaaaaagcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTaaa                                                                                                                                        >  1:141034‑M1/135‑143 (MQ=255)
             ttaaatggcgaagaaacggtctaaataggctgattcacggcatttacgggagaaaaaatcggctaaaacatgaagaaatgaaatgactgagtcagccgagaagaattgccccgctgcgtcgaaccttccctacagtcgcggca                                                                                                                                   <  1:352113‑M1/14‑12 (MQ=255)
             ttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTACTTACATACaa                                                                                                                                   <  1:529721‑M1/14‑1 (MQ=255)
             ttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACaa                                                                                                                                   >  1:453903‑M1/130‑143 (MQ=255)
             ttaaatggcgaagaaacggtctaaataggctgattcaagacatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACaa                                                                                                                                   <  2:118728‑M1/14‑1 (MQ=255)
              taaatggtgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgtaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccctaagttgcaggaga                                                                                                                                  >  2:627447‑M1/129‑132 (MQ=255)
               aaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccctaagttgcaggagat                                                                                                                                 <  1:372379‑M1/16‑13 (MQ=255)
                   ggcgaagaaacggtctaaataggctgattcaaggcatttacgggagccagcagcggtttgaacaccaggaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACaaagaaag                                                                                                                             >  2:168780‑M1/124‑143 (MQ=255)
                      gaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGca                                                                                                                          <  1:680375‑M1/23‑1 (MQ=255)
                        aaaTGGGATGTTGCGCACAGTAACGATGACACACCCTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccct                                                                                                                        <  1:716851‑M1/143‑22 (MQ=255)
                          aaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAACAACGGcaccaa                                                                                                                      <  2:170328‑M1/27‑1 (MQ=255)
                              ggtctaaataggctgattcaaggcatttactggagaaaaaatcggctcacacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCaa                                                                                                                  >  1:88139‑M1/113‑143 (MQ=255)
                              ggtctaaataggctgattcaaggcatttacgggagccaagaacgtcgcaaacatgaagaaatgaaattactgagtcagccgagaagaatttccccgcttattcgcaccttccCTACTTAACTACAAAGAAAGACAACAATcac                                                                                                                  <  2:572995‑M1/31‑2 (MQ=255)
                                 ctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACtt                                                                                                               <  1:292102‑M1/34‑1 (MQ=255)
                                   aaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagcggagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACttaa                                                                                                             <  1:742594‑M1/36‑1 (MQ=255)
                                   aaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACttaa                                                                                                             >  1:412765‑M1/108‑143 (MQ=255)
                                     cgcACAGGCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGAGAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcat                                                                                                           <  1:325045‑M1/143‑35 (MQ=255)
                                     ataggctgattcaaggcatttacgggagaaaacatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACttaatg                                                                                                           <  2:172570‑M1/38‑1 (MQ=255)
                                       aggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACttaatgtt                                                                                                         >  1:307238‑M1/104‑143 (MQ=255)
                                        acaGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtt                                                                                                        <  1:455466‑M1/143‑38 (MQ=255)
                                          ctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACttaatgttaat                                                                                                      >  1:481388‑M1/101‑143 (MQ=255)
                                              aaaaTAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACCAAgaaaggagcgagcaagtccctgatatgagatcatgtttgtcat                                                                                                  >  1:333795‑M1/1‑100 (MQ=255)
                                                aataatTTACCGTAAATAATCATCTGCTATAAATAAGCACTTTCATGCAATACCAGATAAGGTATTTTTAAACAGACGCTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatct                                                                                                <  2:241102‑M1/143‑46 (MQ=255)
                                                  aggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGtt                                                                                              <  1:553317‑M1/51‑1 (MQ=255)
                                                  aggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGtt                                                                                              <  1:744859‑M1/51‑1 (MQ=255)
                                                   ggcagttacgggagaaaaaatcggcacaaacatgaagaaatgaaatgacggagtcagccgagaagaagttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACGTAATGTTAATGAAATGttt                                                                                             >  1:746716‑M1/92‑143 (MQ=255)
                                                     catttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTa                                                                                           <  1:537718‑M1/54‑1 (MQ=255)
                                                     catggacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTa                                                                                           >  1:88358‑M1/90‑143 (MQ=255)
                                                        ttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACat                                                                                        >  1:747411‑M1/87‑143 (MQ=255)
                                                         tacgggagaaaaaatcggctcaaacatgaagaaatgaaaggactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACata                                                                                       >  2:664077‑M1/86‑143 (MQ=255)
                                                            gggagaaaaaatcggctcaaacatgaagaaatgaaatgactgcgtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACatatat                                                                                    >  2:329545‑M1/83‑143 (MQ=255)
                                                              gagaaaaaatcggctcaaacatgaagaaatgcaatgactgagtcagccgacaagaatttccccgctcattcgcaccttccCTAATTAAATACACAGCAAGGCAACAATCAACTTAATGTAACTAAAATGAGTTACCTATattc                                                                                  <  2:220803‑M1/63‑2 (MQ=255)
                                                              aataaaCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACATACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaaca                                                                                  <  1:453718‑M1/143‑60 (MQ=255)
                                                               agaaatattcggatcaaacatgaagaaatgaaatgactgagtcagccgagaagaaaatccccgcttatccgcaccatccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTaa                                                                                 >  1:82736‑M1/80‑143 (MQ=255)
                                                                 aatCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggg                                                                               <  1:708081‑M1/143‑63 (MQ=255)
                                                                 aaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAAcc                                                                               <  1:785943‑M1/66‑1 (MQ=255)
                                                                  aaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCa                                                                              >  1:79667‑M1/77‑143 (MQ=255)
                                                                     aatcggctcaaacatgaagaaatgaaatgactgagtcagctgcgaagaatttccccgcttattcgcaccttcaCTAATTAAATACAAAGAAAGGCACCACTCCACTTACTGTTAATCAAATATTTTACATATATCAACCACtt                                                                           <  2:244413‑M1/70‑1 (MQ=255)
                                                                      tcTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcat                                                                          >  2:635298‑M1/1‑76 (MQ=255)
                                                                        tGCTATAAATAATCACTTTCATGCAATACAAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagaacatgtttgtcatatgaagccatagaacagggttcatca                                                                        >  2:367027‑M1/1‑74 (MQ=255)
                                                                           tagaaataatcaCTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga                                                                     <  1:132622‑M1/140‑73 (MQ=255)
                                                                           ctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACAGATATTAACCACTTGTTTaa                                                                     <  1:317703‑M1/76‑1 (MQ=255)
                                                                            tcaaacatgaagaaatgaaatgactgagtcagccgagaagcatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACACTCAACTTAATGCTAATGAAATGATTTACAtatattaaccaactgttgcat                                                                    <  2:84499‑M1/77‑11 (MQ=255)
                                                                            tcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAAt                                                                    <  1:242828‑M1/77‑1 (MQ=255)
                                                                            tcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattagcaccttccCTAAGTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAAt                                                                    <  2:799128‑M1/77‑1 (MQ=255)
                                                                            tcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttatgcgcaccttccCTAATTAAATACAAAGAAAGGCAACACTCCACTTACCGTTAATAAAATGCTTACCACATATCAAccccttgcatact                                                                    <  2:751702‑M1/77‑7 (MQ=255)
                                                                              aaataaTCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcacgagtc                                                                  >  2:790219‑M1/1‑68 (MQ=255)
                                                                              aaataaTCACTTGCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcattatgattc                                                                  <  2:325641‑M1/143‑76 (MQ=255)
                                                                                ataatCACTTTCATGCACTACCAGGTAAGCTATTGTTAAACAGACAGTTACCGCACAACGAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcat                                                                <  2:237418‑M1/143‑78 (MQ=255)
                                                                                 taatCCCTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatc                                                               <  2:667180‑M1/143‑79 (MQ=255)
                                                                                 taatCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggcgccatagaacagggttcatcatgagtcatc                                                               >  1:103280‑M1/1‑65 (MQ=255)
                                                                                 catgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGga                                                               >  1:587381‑M1/62‑143 (MQ=255)
                                                                                     tagccatacaaggaccgagtcagccgagaagaacttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAAt                                                           >  2:516057‑M1/58‑143 (MQ=255)
                                                                                     aagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAAt                                                           >  2:553317‑M1/58‑143 (MQ=255)
                                                                                     aagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAAt                                                           <  1:380779‑M1/86‑1 (MQ=255)
                                                                                     aagaaatgaaacgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAATAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAAt                                                           >  2:124268‑M1/58‑143 (MQ=255)
                                                                                      agaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATc                                                          >  2:441270‑M1/57‑143 (MQ=255)
                                                                                        tttCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttac                                                        >  1:473015‑M1/1‑58 (MQ=255)
                                                                                        tttCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgagagctggagccatagaacagggttcatcatgagtcataaacttgc                                                        >  1:334203‑M1/1‑58 (MQ=255)
                                                                                        tttCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgttggtcatctggagccatcgaacagggtccaccatgagtcatcaccttac                                                        >  1:36275‑M1/1‑58 (MQ=255)
                                                                                        aaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAg                                                        <  2:622749‑M1/89‑1 (MQ=255)
                                                                                            cttcaatACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACGAAggcaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgtatccatagaacatgtttcatcatgagtcatcaacttaccttc                                                    <  2:580647‑M1/140‑90 (MQ=255)
                                                                                             tGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcg                                                   >  2:680671‑M1/1‑53 (MQ=255)
                                                                                             tGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcg                                                   >  2:267199‑M1/1‑53 (MQ=255)
                                                                                               cAATACCAGATAAGCTATTTTTAAACAGACACTTACCTCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgcc                                                 <  2:538539‑M1/143‑93 (MQ=255)
                                                                                               atgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGCAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTa                                                 <  2:363986‑M1/96‑1 (MQ=255)
                                                                                                          agccgggaagaattagcccgcttattcgcacttttcCTAATTCAATACAAAGAAAGGCAACAATCAACTTGATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATaa                                      >  2:477973‑M1/37‑143 (MQ=255)
                                                                                                          agccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATaa                                      <  1:215039‑M1/107‑1 (MQ=255)
                                                                                                              tATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagc                                  >  1:669862‑M1/1‑36 (MQ=255)
                                                                                                              tATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagc                                  >  1:594735‑M1/1‑36 (MQ=255)
                                                                                                               aTTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagca                                 <  1:429763‑M1/143‑109 (MQ=255)
                                                                                                                  tttAAACAGACACTTACCGCACAACAAACTAAggaagttgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagcgaattcagaagtg                              >  2:306095‑M1/1‑32 (MQ=255)
                                                                                                                  tttAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcctctggagccatagaacagggttcatcatgagtcatcaacttaccttccccgaccgtgaatccagcagca                              >  2:729567‑M1/1‑32 (MQ=255)
                                                                                                                  agaatttccgcgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACAttt                              >  2:152173‑M1/29‑143 (MQ=255)
                                                                                                                    aatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGa                            >  1:729711‑M1/27‑143 (MQ=255)
                                                                                                                         aGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagcacagggttcatcatgagtcatcaacttaccttcgccgacagtgacttcagcagtacgcgccc                       >  2:382254‑M1/1‑25 (MQ=255)
                                                                                                                           ccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGCTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATtata                     >  1:568249‑M1/20‑143 (MQ=255)
                                                                                                                            cgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTatat                    <  2:114987‑M1/125‑1 (MQ=255)
                                                                                                                            cacTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtca                    <  1:47832‑M1/143‑122 (MQ=255)
                                                                                                                                     cacaACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaa           <  1:578619‑M1/143‑131 (MQ=255)
                                                                                                                                       accttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGTGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGa         >  1:417361‑M1/8‑143 (MQ=255)
                                                                                                                                        ccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAg        <  1:275653‑M1/137‑1 (MQ=255)
                                                                                                                                         cttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAGTTACATTTAAAATTATATGATAACCGGGAGt       <  2:5762‑M1/138‑1 (MQ=255)
                                                                                                                                         cttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGt       <  2:466238‑M1/138‑1 (MQ=255)
                                                                                                                                             cCTAATTAAATACAAAGCAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGTGAtt   >  1:401058‑M1/2‑143 (MQ=255)
                                                                                                                                             cCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCTGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGTGAtt   >  1:431766‑M1/2‑143 (MQ=255)
                                                                                                                                              cTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGtgattg  >  1:687834/1‑143 (MQ=255)
                                                                                                                                              cTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGATAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGtgattg  >  1:766112/1‑143 (MQ=255)
                                                                                                                                              |                                                                                                                                              
GCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGTGATTG  >  NC_000913/1979344‑1979628

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.