| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3423663 = | NA (NA) | 7 (0.150) | 6/280 | 5.3 | 12.0% | intergenic (‑10/+3) | thrV/rrfD | tRNA‑Thr/5S ribosomal RNA of rrnD operon |
| ? | NC_000913 | = 4040682 | 52 (1.120) | intergenic (+47/+223) | rrfA/mobB | 5S ribosomal RNA of rrnA operon/molybdopterin‑guanine dinucleotide biosynthesis protein B | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGG‑GTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTAT > NC_000913/3423527‑3423798 | aCTGCCGCCAGACAAATTCTTTTCTATTGTGCCGAGCTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGG‑GTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGc < 1:214995/143‑1 (MQ=255) cgccAGACAATTTCTTTTCTAATCTGCCTAACTTTAATCTAAATTGTGGTGTTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGG‑GTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGc < 1:118951/143‑1 (MQ=37) ccAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGAGACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGG‑GTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAg < 1:63420/143‑1 (MQ=255) cAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGG‑GTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGACTGGCAGt > 2:317210/1‑143 (MQ=255) aCAAATTCTTTTCTATGCTGCGGAACGTTACCCTAAAACGTGGGGCTGATACCCAGAGTCGAACTGGGGACCTCCCCCTTACCATGT‑GTGCGCTCTAGCAGCTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTcc < 2:319472/143‑1 (MQ=255) aCAAATTCTTTTCTAATCTGCCGCACATTAACCTTAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGG‑GTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGACGCCTGGCAGTTcc > 2:611398/1‑143 (MQ=255) tCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTTCTGATACCCAGAGTCGAACTGGGGACATCACCCTTACCAAGG‑GTGCGCTCTACCAACTGAGCCATATCAGCCCGCTAAATTTGATGCCTGGCCGTTCCCTAcgc > 1:748051/1‑141 (MQ=255) cTTCTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGG‑GTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTActct < 1:65686/143‑1 (MQ=255) ttttCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGG‑GTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTCGCAGTTCCCTACtctc > 1:495832/1‑143 (MQ=255) cgcaTCTGCCGAACTTTAACCGAAGAAGTGGTGCTGATACCCAGTGTCGACCTGGGGACCTCACCCTTACCAAGG‑GTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCAt < 1:158124/140‑1 (MQ=37) tAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGG‑GTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGCTGCCTGGCAGTTCCCTACTCTCGCATg > 1:20380/1‑143 (MQ=255) caaTCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGG‑GTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATg < 1:414735/142‑1 (MQ=255) aTCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGG‑GTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATggg > 1:103486/1‑143 (MQ=255) ccggCCGAACTTTCGCCGACGCAGTGGTGCTGGTACCCAGAGGCGTGCTGGGGCCCTCACCCTTACCAAGT‑GTGCGCTCTACCAATTGCGCCATATCAGCATGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATgggg < 2:246257/140‑1 (MQ=25) ccGAACTTTAACCTAAACAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGG‑GTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGAc < 1:694905/143‑1 (MQ=255) cTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTCCCAAGA‑GTGCGCTCTACCAACTGAGCCATCTCAGCCCGCTAAATTTGATGCCCGGCAGTTCCCTACTCCCGCATGCGGAGACCCcac > 2:605463/1‑143 (MQ=37) tttAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTTTTGACCTCACCCTTACCAAGG‑GTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCcaca > 1:766533/1‑143 (MQ=255) gttatcctcgcacgtggtgCTGATACCCAGAGTCGAACTGGGGACTTCATGC‑TACCGCGGCCTCCGCGCTCCCCACTGAAGCGTACCCGCTCGCTCTACACGACGCCCGGCCGTTCCCTACTCTCGCATGGGGAGACCCcaca < 2:800242/130‑1 (MQ=255) aCCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGG‑GTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTAc > 1:744095/1‑143 (MQ=255) aaaaaGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGG‑CTGCGCTCTACCAACTGAGACATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATc > 1:762633/1‑143 (MQ=255) aaaaGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGG‑GTGCGCTCTACCAACTGAGCCATACCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTCCCATCg > 2:801035/1‑143 (MQ=255) aggggtgCTGATACCCGGAGTCGAACGGGGGACCGCACCCTTACCAAGG‑GTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACCCTCGCATGGGGAGACCCCACACTACCATCGgcg < 1:652712/140‑1 (MQ=37) cTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGG‑GTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGGTACGGc > 1:75075/1‑143 (MQ=255) cccAGAGTCGAACTGGGGACCTCACCCTTACCAAGG‑GTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCa < 1:747586/143‑1 (MQ=255) cAGAGTCGAACTGGGGACCTCACCCTTACCAAGG‑GTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCCCACCACCATCGGCGCTACGGCGCTTCACt > 2:803271/1‑143 (MQ=255) cAGAGTCGAACTGGGGACCTCACCCTTACCAAGG‑GTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACt < 1:374370/143‑1 (MQ=255) agagTCGAACTGGGGACCTCACCCTTACCAAGG‑GTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACtt < 2:103486/143‑1 (MQ=255) tCGAACTGGGGACCTCACCCTTACCAAGG‑GTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGa < 1:737020/143‑1 (MQ=255) ggaCTGGGGGCCTCACACCTACCAAGG‑GTGCGCTCTACCAACTGCGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGt < 1:283772/141‑1 (MQ=255) gAACTGGGGACCTCACCCTTACCAAGG‑GTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTAAACTCGCATGGGGAGACCCCACACTACCACCGGCGCTGCGGCGTGTTCCTTCTGGGt > 1:672857/1‑143 (MQ=25) aaCTGGGGACCTCACCCTTACCAAGG‑GTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGCGACCCCACACTACCACCGGCGCTACGGCGCTTCACCTCTGactc > 1:181406/1‑140 (MQ=25) aCCTCACCCTTACCAAGG‑GTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATgg > 1:659341/1‑143 (MQ=255) cTCACCCTTAACAAGG‑GTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGGTCCCTACTCTCGCATGGGGCGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCACgggc > 2:490130/1‑142 (MQ=255) tCACCCTTACCAAGG‑GTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCCACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGt < 2:100461/143‑1 (MQ=255) ccTTACCAAGG‑GTGCGCTCTACCAACTGAGCCATATCAACACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCAACACTACCATCGGCGCTACGGAGATTCCCTTCCGGGTTCGGCagaggggccga > 1:126165/1‑133 (MQ=18) ttACCAAGG‑GGGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTg > 1:198519/1‑143 (MQ=255) ccAAGG‑GTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTGCGGCGTTACACTTCTGAGTGCGGCGTGGGGTCAGGTaggc > 1:65215/1‑142 (MQ=18) ccAAGG‑GTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGGATGGGGTGAGGTGGGa > 1:442163/1‑143 (MQ=255) cAAGG‑GTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGac < 1:317210/143‑1 (MQ=255) gcgcTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACcgcg > 2:55994/1‑143 (MQ=255) cTGAGCCATATCAGCACGCTAACTTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCACACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCAGCGCGCTACGGCCGCCa > 2:445432/1‑143 (MQ=255) ccATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCaa > 2:376488/1‑143 (MQ=255) cATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCCTGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCaaa > 1:767502/1‑143 (MQ=255) cATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGCTGGGACCACCGCCCTACGGCCGCCAGGCaca > 2:78707/1‑141 (MQ=255) gCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTAt > 1:778545/1‑143 (MQ=32) | ACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGG‑GTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTAT > NC_000913/3423527‑3423798 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |