| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 257908 = | NA (NA) | 39 (0.840) | 33/284 | 0.4 | 95.1% | intergenic (+9/‑768) | crl/crl | pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator,regulator, Surface structures, transcriptional regulator of cryptic csgA gene for curli surface fibers/pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator,regulator, Surface structures, transcriptional regulator of cryptic csgA gene for curli surface fibers |
| ? | NC_000913 | = 1293039 | 2 (0.040) | intergenic (‑117/‑488) | hns/tdk | global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase | |||||
Only 100 of 104 total aligned reads displayed.
TCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAT‑‑TTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCT > NC_000913/1292898‑1293181 | ttcccgccgtgcgttcgccgtcacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTgccgc > 1:48242‑M1/135‑143 (MQ=255)gtccggcgttgctttttccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTgccgc > 1:190761‑M1/135‑143 (MQ=255) aGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGACAGGAATGTAAGGAATTCAAAATTGTTCTTTGTTTTGTGCCGggt < 2:231412‑M2/143‑4 (MQ=255) aGAATTTTAAGTGCTTCGCTCATTGTAGAACTCCATAAAAGATAGTGGGGTGGTTTGTTGAGGTAATAATAGAGCTATAAATGCATTAGTGCAGTATGCATGAATTTAAGGTATTCAAAATTGTTCTTTATTTTGTgccgggt > 2:610419/1‑140 (MQ=255) aaTTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaa < 2:158081‑M2/143‑6 (MQ=255) aaTGTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGACGggtaa > 2:360646‑M2/1‑138 (MQ=255) agtttaaGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaat > 1:70066‑M2/3‑137 (MQ=255) tttAAGTGCTTCGCTCATTGTAGTATTCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatga > 1:289125‑M2/1‑135 (MQ=255) gtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacgTTGTGCCGCCaataaat < 1:688838‑M1/17‑1 (MQ=255) gtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCaataaat < 1:198789‑M1/17‑1 (MQ=255) gcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAatat < 1:54127‑M1/19‑1 (MQ=255) cttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctccaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATc < 2:52096‑M1/20‑1 (MQ=255) ttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactccctcagtacgttggccgcatcaccTTGTGCCGCCAATAAATATCt < 1:208754‑M1/21‑1 (MQ=255) ttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTGGTGCCGCCAATAAATAtcc < 1:67073‑M1/21‑2 (MQ=255) tttgccgtaacgcaccaccccgtcagtagctgaacaggagagacagctgatagaaacagaagccactgaaaaaaaaaaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCtt > 2:192250‑M1/122‑143 (MQ=255) tGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCATTACATTCAGTTGTGCAAGAGCCAGGAATGGAAGGAATTCAACATTGTTCGCTATGTTGCGCCGggaaatgactccaa < 2:694334‑M2/143‑15 (MQ=255) ttCGCTCATTGTAGTAATCTCAAACTTATATTGGGGGGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAACTTGTTTTTTTGCCTGTGCCGggttgagactccaactc < 2:561845‑M2/143‑18 (MQ=255) gccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTc < 2:186231‑M1/25‑1 (MQ=255) gccgctccgcaccaccccgtcagtcgccgcaccggaggcacagctgatagaaacagaagccactgcagcacctaaaacacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTc > 1:505158‑M1/119‑143 (MQ=255) cgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcataccctaactcgggaagttggcagcatcaccTTGTGCCGCCAAGAAATATCTTTTCAt < 1:761060‑M1/27‑1 (MQ=255) gttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTtcaga < 1:675770‑M1/28‑3 (MQ=255) ttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATaa < 1:284557‑M1/29‑1 (MQ=255) ttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGACAATAAATATATTTTGATaa < 1:566493‑M1/29‑1 (MQ=255) cTCATTGTAGTAATCTCAAACTTATAGTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattg > 1:538871‑M2/1‑122 (MQ=255) tagtaATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCCGTTGTGCAGTAGCCAGGAATGTACGGAATACAGAATTGTTCTTTCTTTTGTGCCGggaaatcaccccaacttcctgatcgtgt < 2:603812‑M2/143‑29 (MQ=255) tagtaATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgt < 2:669991‑M2/143‑29 (MQ=255) aTCGCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttat > 1:93293‑M2/1‑110 (MQ=255) gatcaaACTTATATTGGGGTGGGTTGTGGAGGTGAGAAGAGAGCCTTAAATTGAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTGCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatg > 2:597360‑M2/3‑109 (MQ=255) tcAAACTTATATTGGGGTCGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgtt > 1:618027‑M2/1‑107 (MQ=255) agtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTTGCCAGCAACGAc < 1:140028‑M1/46‑1 (MQ=255) aaaCTTATATTGGGGTGGTTTGTTGAGGTAATAATGAAGCCTAAAATTCAGTGGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgctagtgttttatgttca < 1:765740‑M2/143‑39 (MQ=255) aaaCTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgtgttatgttca < 2:13659‑M2/143‑39 (MQ=255) aaaCTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTGGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtgatgactccaacttattgatagcgttttaggttca < 2:28138‑M2/143‑39 (MQ=255) tagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacagcatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGAcgc < 2:398668‑M1/48‑1 (MQ=255) agctgaagaggcgggaaagctgacagaaccagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGAcgcg > 2:175688‑M1/95‑143 (MQ=255) ctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGc < 1:626861‑M1/51‑1 (MQ=255) caggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCAtata < 1:350062‑M1/56‑1 (MQ=255) gagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtacgttggcagcatcaccTTGTGCCGCCAGTCAATATCTTTTCATAAACTTAGCCAGCAAAGACGCGCCATCTAGcc < 1:333789‑M1/59‑1 (MQ=255) acagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaacTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAACGACGCGGCATATAGCCCTAt‑‑t < 2:175997‑M1/64‑1 (MQ=255) ttgttgAGGTAAGAATAGAGTCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgacttt > 2:309337‑M2/1‑86 (MQ=255) tgttgAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttg < 1:167104‑M2/143‑59 (MQ=255) agctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGAGGCATACAGCCCCAT‑‑TTa < 2:475697‑M1/66‑1 (MQ=255) gttgAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgt > 1:745804‑M2/1‑84 (MQ=255) tgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatccgtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAT‑‑TTacac > 1:177204‑M1/75‑143 (MQ=255) gTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgca < 1:29374‑M2/143‑66 (MQ=255) agaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAT‑‑TTACACCgat > 2:709794‑M1/71‑143 (MQ=255) gaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATGGCCCTAT‑‑GTACACCgatg < 1:302494‑M1/74‑1 (MQ=255) taataGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTATATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctc < 2:320886‑M2/143‑70 (MQ=255) acagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTCTTCATAAAATTAGCCAGAACAGACGCGGCATATCACCCTAT‑‑TTACACCCATCAtt < 2:219994‑M1/77‑1 (MQ=255) agaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAT‑‑TTACACCGATGATTTc < 1:320453‑M1/79‑1 (MQ=255) aagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATAGCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAT‑‑TTACACCAATGATTTCgc < 1:402703‑M1/81‑1 (MQ=255) ccTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatt > 1:467627‑M2/1‑66 (MQ=255) actggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAT‑‑TTACACCGATGATTTCGCAGCAc < 1:805444‑M1/86‑1 (MQ=255) ttAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgccgctccaccgatttt < 1:540686‑M2/143‑80 (MQ=255) agcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAT‑‑TTACACCGATGATTTCGCAGCACGTGAg > 2:453308‑M1/53‑143 (MQ=255) cacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAT‑‑TTACACCGATGATTTCGCAGCACGTGAGGt > 1:487416‑M1/51‑143 (MQ=255) acctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAT‑‑TTACACCGATGATTTCGCAGCACGTGAGGtt > 2:111998‑M1/50‑143 (MQ=255) aGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacga < 2:645220‑M2/143‑88 (MQ=255) ctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAT‑‑TTACACCGATGATTTCGCAGCACGTGAGGTTaa < 2:412969‑M1/96‑1 (MQ=255) ttGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgaca > 1:83385‑M2/1‑54 (MQ=255) tcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAT‑‑TTACACCGATGATTTCGCAGCACGTGAGGTtaac < 1:141028‑M1/97‑2 (MQ=255) tcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccATGTCACGCCAATAAATATCTTTCCATACAATTAGACAGAAAAGACGCAGCATATAGCCCTAT‑‑TTACACCCATGATTTAGCAGCACGAGAGGTGaaa < 2:185632‑M1/97‑1 (MQ=255) tcaaaaacaccatcatacactaaatcagtaagttcgcagcatcaccTTGTGCCCCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAT‑‑CTACACCGATGATTTCGCAGCACGTGAGGCTaaa < 2:230372‑M1/97‑1 (MQ=255) caaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAT‑‑TTACACCGATGATTTCGCAGCACGTGAGGTTaaaa > 1:234953‑M1/46‑143 (MQ=255) aaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAT‑‑TTACACCGATGATTTCGCAGCACGTGAGGTTAAAAc < 1:350547‑M1/99‑1 (MQ=255) aacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAT‑‑TTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTc > 1:322901‑M1/42‑143 (MQ=255) aacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAT‑‑TTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTc > 1:475697‑M1/42‑143 (MQ=255) tAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttc > 1:756663‑M2/1‑46 (MQ=255) tAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttc > 1:669991‑M2/1‑46 (MQ=255) accatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAT‑‑TTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTg < 1:613687‑M1/105‑1 (MQ=255) catcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAT‑‑TTACACCGATGATTTCGCAGCACGTGAGGTTACAACTTCCTGAt < 2:447777‑M1/107‑1 (MQ=255) cAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGgggaatgacgccaacttagtgatagtgtgttaggttcagataatgcccgatgacttcgtcatgcacctccaccgagtttgagaacgacagcgccacccgtc < 2:377279‑M2/143‑102 (MQ=255) atacactaaatcagtaagttggcagcctcaccTTGTGCCGCCAATAAATCTCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAT‑‑TTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCAt > 1:556679‑M1/33‑143 (MQ=255) acactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAT‑‑TTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGt > 1:355659‑M1/31‑143 (MQ=255) aaTGTAGGGAATTCAAAACTTTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccag > 2:108970‑M2/1‑38 (MQ=255) actaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAT‑‑TTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTca > 1:353875‑M1/29‑143 (MQ=255) actaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGAAAGAAAAGACGCAGCATATAGCCCTAT‑‑TTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTca < 1:194278‑M1/115‑1 (MQ=255) ctaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAACAGACGCGGCATATAGCCCTAT‑‑TTACACCGATGCTTTCGCAGCCCGTGAGGTCAAAACTTCCTGATTCATGTcac < 2:296415‑M1/116‑1 (MQ=255) tAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgcctttgtcatgcccctcctccgcttttgcgaacgacaccgacttccgtcccagcagt < 1:536568‑M2/143‑110 (MQ=255) tAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagcacgacagcgcattccgtcccagacgt < 2:722818‑M2/143‑110 (MQ=255) aatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTTATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAT‑‑TGACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACAtt > 1:656043‑M1/25‑143 (MQ=255) aatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAT‑‑TTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACAtt < 2:715197‑M1/119‑1 (MQ=255) cagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATACAATTAGCCAGAAAAGACGCGGCATATAGCCCTAT‑‑TTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTa > 1:387095‑M1/22‑143 (MQ=255) agtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAT‑‑TTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTAt < 2:759411‑M1/123‑1 (MQ=255) taagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAT‑‑TTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCCTGTCACATTTTATgg < 2:763742‑M1/125‑1 (MQ=255) aaaaTTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgct < 2:480330‑M2/143‑120 (MQ=255) aaTTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgc > 1:610419‑M2/1‑22 (MQ=255) tggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAT‑‑TTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGgaga > 1:771241‑M1/14‑143 (MQ=255) tttATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagatt < 1:316391‑M2/143‑130 (MQ=255) tttATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagatt < 2:341028‑M2/143‑130 (MQ=255) ttATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattc > 2:29374‑M2/1‑13 (MQ=255) ttATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattc < 1:651425‑M2/143‑131 (MQ=255) accTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAT‑‑TTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAgg > 2:54127‑M1/4‑143 (MQ=255) accTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAT‑‑TTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAgg > 2:284557‑M1/4‑143 (MQ=255) accTTGTGCCGCCAATAAATATCTTTCCATAAAATTAGCCAGAAGAGCCGCTGCATATAGCCCTAT‑‑TTACACCCATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAgg > 2:51044‑M1/4‑143 (MQ=255) ccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCCGCCATTTCACCG‑‑GATTGCGCAGTACGTCAGCTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGc > 1:186231‑M1/3‑143 (MQ=255) gCCGggtaattcctccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgc > 1:755595‑M2/1‑4 (MQ=255) ccgccAAAAAAGATCTTTTCACAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAT‑‑TTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTgacgac < 1:143215/143‑1 (MQ=255) ccGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagactcatgttatgcc < 2:583372‑M2/143‑141 (MQ=255) gccAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAT‑‑TTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGACACATTTTATGGGGAGCTCATCGTAGGCTGACGACCt > 2:442329/1‑143 (MQ=255) | TCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAT‑‑TTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCT > NC_000913/1292898‑1293181 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |