| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 4,001,644 | Δ5 bp | coding (220‑224/951 nt) | corA → | magnesium/nickel/cobalt transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4001643 | 1 (0.020) | 51 (1.100) | 43/284 | 0.1 | 98.1% | coding (219/951 nt) | corA | magnesium/nickel/cobalt transporter |
| ? | NC_000913 | 4001649 = | 1 (0.020) | coding (225/951 nt) | corA | magnesium/nickel/cobalt transporter | |||||
TTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCC > NC_000913/4001510‑4001788 | atggattgatcttgtcgcaccggacgacgccgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTcc < 2:658365‑M2/4‑1 (MQ=255) gcttgatcttgtcgaaccggaccacgacgagccacttcgcgtacaatctgaacttggccagcgcatggcaacccgcccggaactggaagacatcgacgcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttc < 2:647652‑M2/7‑1 (MQ=255) tggtgctggtgacgcgggcgatgacgagcgagtgcgcgtagaatctgaacttggccagagcgtggcaacccgcccggaactggaagacagcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttcttc < 2:393790‑M2/10‑1 (MQ=255) gatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttcttct > 1:398885‑M2/133‑143 (MQ=255) gtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTg < 1:357216‑M2/17‑1 (MQ=255) gtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcgccacgttgctttgcagacgacgacggcctgccgCgcctgcttctccttcg > 2:597948‑M2/127‑141 (MQ=255) tcgacgacgagctgctgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcgtcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGa < 2:454644‑M2/27‑1 (MQ=255) cgacgacgagcgactgcgcgtacaatctgaacttggccagtgcctggcaacccgcccggaactcgaagacatcgaagcatcggcacgtttctttgacgacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGaa < 1:35582‑M2/28‑1 (MQ=255) cgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGaa < 2:237818‑M2/28‑1 (MQ=255) cgacgacgaccgactgcccgtaccatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGaa < 1:387439‑M2/28‑1 (MQ=255) acgacgagctactgcgcgtacgagctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGa < 1:24158‑M2/30‑1 (MQ=255) gacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcctcggcacgtgtctttgaagacgacgccggcctgcatCCCCTTCTTCCTCCTTGACGATGCGGAAGATc > 2:430770‑M2/112‑143 (MQ=255) acgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcccgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCa < 2:582390‑M2/33‑1 (MQ=255) gagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggcagacatcgaagcaccggcacgtttctttgaagccgacgacggcctgcatCTCCTCCTTCTTCTTTGAAGATGCGGAAGATCACg > 2:558683‑M2/109‑143 (MQ=255) agcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGc < 1:751932‑M2/36‑1 (MQ=255) gcgcgtgcgcgtacgatctgaacgtggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCATGcc < 2:733492‑M2/37‑1 (MQ=255) gcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGcc > 1:131968‑M2/107‑143 (MQ=255) cgactgcgcgtacaagctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCg < 1:554471‑M2/38‑1 (MQ=255) tgcgcgtacaatctgagcttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTaa < 2:736215‑M2/42‑1 (MQ=255) caTCTGAACTCGGCCAGAGCCTGGCAACCCGCCCGGAACGGGGAGACATCGAAGCCTCGGTCCGTTTCATTGTA‑TTG‑‑GATGGCAT‑CAT‑TTGTCTCCTTCTTCTTCTTTGAAGACGCGGTATATCACGCCGGTAACTCCACtgt < 2:784378/142‑1 (MQ=255) tggatctgatcttcgacagggcctggcaacgcgcgcggaactggaagacatggaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGTGGAAGATCACGCCGGTAACTCCACt < 2:4913‑M2/49‑1 (MQ=255) tctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCGACTGTgg > 1:487185‑M2/91‑143 (MQ=255) cgaaactcggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCGTCTGTGAAAATCATCAACATCACGCCGGTAACTCCACTGTGGc < 2:99277‑M2/54‑1 (MQ=255) gccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGAGGCGGAAGCTCACGCCGGCAACTCCACTGTGGCAGTTACCAt > 2:614384‑M2/81‑143 (MQ=255) gagccgtgctacccgccgggaactggaatgcgtctgagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGt < 2:127738‑M2/67‑1 (MQ=255) gcctggcaagccggtctgaattggaagacatcgaagcatgggcacgtttctttggagacgacgacggcctgcatCTCCGTCTTCTTCTTTGAAGATGCGGAAGATGACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGa < 2:81320‑M2/69‑1 (MQ=255) gtggcacgccgcccggagctggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTGCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACGGTGGCATTTACCATCCGTGATg < 2:359291‑M2/71‑1 (MQ=255) ctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATg > 1:680134‑M2/73‑143 (MQ=255) ctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGACGCGGAATATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATg < 1:765287‑M2/71‑1 (MQ=255) gcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGgtc < 1:598323‑M2/74‑1 (MQ=255) caacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGgcatttaccatcacggatggtaa < 2:595458‑M2/75‑12 (MQ=255) cgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGt < 1:337657‑M2/80‑1 (MQ=255) aactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTActct < 1:17456‑M2/87‑1 (MQ=255) tggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTGCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcg < 2:435981‑M2/90‑1 (MQ=255) ggaggagatcgaagcgtcggtatgcttgttcgaagacgacgagggcctgcacCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCATGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgt < 2:343187‑M2/91‑1 (MQ=255) ggaagacatcgaagcatctgcacgtttctttgaagacgacgccggcctgcatCTCCTTCTGCTTCTTGGAAGATGCGGAATATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgt < 2:550685‑M2/91‑1 (MQ=255) ggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTCACCATCCGTGATGGTCGTGGATTTACTCTgcgt > 2:378686‑M2/53‑143 (MQ=255) gaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtg > 1:103849‑M2/52‑143 (MQ=255) gaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtg > 2:292404‑M2/52‑143 (MQ=255) cagacactgaagcatcggcacttttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtga < 2:752020‑M2/93‑1 (MQ=255) aagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtga > 1:138083‑M2/51‑143 (MQ=255) ttggacgggtcggcacgtttctttgatgacgacgccggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGAGCACGCCGGTAACTCCACTGTGGCATCTACCATCCGCCATGGTCGTCTGTTTACTCTgcgtgagcgtg < 2:703671‑M2/98‑1 (MQ=255) gaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTCACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAAc > 2:582987‑M2/43‑143 (MQ=255) gcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCCTGCGCGTGAGCTGc > 2:415033‑M2/40‑143 (MQ=255) cggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGATGTTCCCGCCCGTCCCTCCACTGTGGCATTTCCCATTCTTGATGGTAGACTGTTTACTCTGCGTGAGTGTGAACTGACcga > 1:64814‑M2/36‑142 (MQ=255) cacgtcctgggaagacgacgacggcctgcatCTCCGTCTTCTTCGTTGAAGATGCGGAAGATCACGCCGGTAACTCCGCTGTGGCATTTACCATCCGTGATGGTCGGCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCtttt < 1:620219‑M2/112‑1 (MQ=255) acgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCtttt < 1:262808‑M2/112‑1 (MQ=255) tttctttgaagacgacgccgccctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGt < 1:154534‑M2/115‑1 (MQ=255) tttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTGACTCCCCTGTGGCATTTCCCCTCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGACCTGCCCGCTTTTCGt > 1:203558‑M2/29‑143 (MQ=255) tttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCCTTTACCATCCGTGATGGTCGTCTGTCTACTCTGCCCGAGCGTGACCTGCCCGCTTTTCGTCCGt > 1:742275‑M2/25‑143 (MQ=255) ttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGCCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCCTCTgtg > 2:653858‑M2/24‑142 (MQ=255) catCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGAGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGCAGcc > 2:494159‑M2/4‑143 (MQ=255) | TTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCC > NC_000913/4001510‑4001788 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |