| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 191713 = | 69 (1.140) | 5 (0.090) | 5/268 | 7.8 | 7.1% | intergenic (+5/‑142) | tsf/pyrH | translation elongation factor EF‑Ts/uridylate kinase |
| ? | NC_000913 | 191747 = | 65 (1.130) | intergenic (+39/‑108) | tsf/pyrH | translation elongation factor EF‑Ts/uridylate kinase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AGCCATGTTTCTTTCCTGAGACTGTCAACGATTGAAATGAATTAATACTAGCGACATTGTACGTCGCTTTTCAGCGCAGCCCCACAAGGGTTAGCTGAATTTACAAGATGGGCACAAAAAGAAGCCGCCCTCAGGCGGCTCCTTTTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/191860‑191713‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctttttgTGCCCATCTTGTAAATTCAGCTAACCCTTGTGGGGCTGCGCTGAAAAGCGACGTACAATGTCGCTAGTATTAATTCATTTCAATCGTTGACAGTCTCAGGAAAGAAACATGGCTACCAATGCAAAACCCGTCTATAAAC > NC_000913/191747‑191885 AGCCATGTTTCTTTCCTGAGACTGTCAACGATCGAAATGAATTAATACTAGCGACATTGTACGTCGCTTTTCAGCGCAGCCCCACAAGGGTTAGCTGAATTTACAAGATGGGCACAAAAAGAAGCCGCCCTCAGGCGGCTCCT < 1:762940/143‑1 CATGTTTCTTTCCTGAGACTGGCAACGATTGAAATGAATTAATACTAGCGACATTGTACGTCGCTTTTCAGCGCAGCCCCACAAGGGTTAGCTGAATTTACAAGATGGGCACAAAAAGAAGCCGCCCTCAGGCGGCTCCTTTT < 1:4424/143‑1 CATGTTTCTCTCCGGAGACTGTCACTGATTGAAATGAATTAATACTAGCGACATTGTACGTCGCTTTTCAGCGCAGCCCCACAAGGGTTAGCTGAATTTACAAGATGGGCACAAAAAGAAGCCGCCCTCAGGCGGCTCCTTTT < 1:793357/143‑1 ATGTTTCTTGCTTGAGACTGTCAACGATTGAAATGAATTAATACTAGCGACATTGTACGTCGCTTTTCAGCGCAGCCCCACAGGGGTTAGCTGAATTTACAAGATGGGCACAAAAAGAAGCCGCCCTCAGGCGGCTCCTTTTT < 1:485383/143‑1 CACAAAAAGAAGCCGCCCTCAGGCGGCTCCTTTTTGTGCCCATCTTGTAAATTCAGCTAACCCTTGTGGGGCTGCGCTGAAAAGCGACGTACAATGTCGCTAGTATTCATTCCTTTCAATCGTTGACAGTCTCAGGAAAGAAA > 2:661883/1‑143 AAAGAAGCCGCCCTCAGGCGGCTCCTTTTTGTGCCCATCTTGTAAATTCAGCTAACCCTTGTGGGGCTGCGCTGAAAAGCGACGTACAATGTCGCTAGTATTACTTCATTTCAATCGTTGACAGTCTCAGGCAAGAAACATGG > 2:421130/1‑143 CCGCCCTCAGGCGGCTCCTTTTTGTGCCCATCTTGTAA > 1:703/1‑38 CCGCCCTCAGGCGGCTCCTTTTTGTGCCCATCTTGTAA < 2:703/38‑1 agGGCGGCTCCTTTTTGTGCCCATCTTGTAAATTCAGCTAACCCTTGTGGGGCTGCGCTGAAAAGCGACGTACAATGTCGCTAGTATTAATTCATTTCAATCGTTGACAGTCTCAGGAAAGAAACATGGCTACCAATGCAAAA < 2:787918/141‑1 TTTTGTGCCCATCTTGTACATTCAGCTAACCCTTGTGGGGCTGCGCTGAAAAGCGACGTACAATGTCGCTAGTATTAATTCATTTCAATCGTTGACAGTCTCAGGAAAGAAACATGGCTACCAATGCAAAACCCGTCTATAAA < 1:85637/143‑1 TTTGTGCCCATCTTGTAAATTCAGCTAACCCTTGTGGGGCTGCGCTGAAAAGCGACGTACAATGTCGCTAGTATTAATTCATTTCAATCGTTGACAGTCTCAGGAAAGAAACATGGCTACCAATGCAAAACCCGTCTATAAAC < 1:1053241/143‑1 TTTGTGCCCATCTTGTAAATTCAGCTAACCCTTGTGGGGCTGCGCTGAAAAGCGACGTACAATGTCGCTAGTATTAATTCATTTCAATCGTTGACAGTCTCAGGAAAGAAACATGGCTACCAATGCAAAACCCGTCTATAAAC < 2:479974/143‑1 AGCCATGTTTCTTTCCTGAGACTGTCAACGATTGAAATGAATTAATACTAGCGACATTGTACGTCGCTTTTCAGCGCAGCCCCACAAGGGTTAGCTGAATTTACAAGATGGGCACAAAAAGAAGCCGCCCTCAGGCGGCTCCTTTTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/191860‑191713‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctttttgTGCCCATCTTGTAAATTCAGCTAACCCTTGTGGGGCTGCGCTGAAAAGCGACGTACAATGTCGCTAGTATTAATTCATTTCAATCGTTGACAGTCTCAGGAAAGAAACATGGCTACCAATGCAAAACCCGTCTATAAAC > NC_000913/191747‑191885 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |