New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 227052	31 (0.510)	6 (0.100)	5/270	7.8	16.8%	noncoding (1294/2904 nt)	rrlH	23S ribosomal RNA of rrnH operon
	?	NC_000913	2727908 =	NA (NA)					noncoding (1275/2904 nt)	rrlG	23S ribosomal RNA of rrnG operon
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GCGGCAGCGACGCTTATGCGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTACTGTGAGGTATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATCGGGGCAGGGTGAGTCGACCCCTAAGGCGAGGCCGAAAGGCG  >  NC_000913/226918‑227129                                                                                                                                       |                                                                              gCGGCAGCGACGCTTATGCGTTGTTGGGTAGGGAAGCGATATGTAAGCCTGTGAAGGTGTACTGTGAGGTATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGaa                                                                       <  2:1003021/143‑1 (MQ=255)    gCAGCGACGCTTATGCGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTACTGTGAGGTATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGAc                                                                    >  1:673875/1‑143 (MQ=37)      aGCGACGCTTATGCGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTACTGTGAGGTATGCTGGAGGTATCAGAAGTGCGGATGCTGACATAAGTAACGATAACGCGGGCGAAAAGCCCCATCGCCGGAAGACCa                                                                  >  1:249943/1‑143 (MQ=11)       gCGACGCTTAGGTGGGGTTGGGTAGGGGAGCGTTCTGCAAGCCTGCGTAGGTGTACTGTGAGGTATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCaa                                                                 <  1:976478/143‑1 (MQ=11)           cGCTTATGCGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTACTGTGAGGTATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGt                                                             >  2:862239/1‑143 (MQ=37)             cTTATGCGTCGTTGGGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTACTGTGAGGTATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTc                                                           <  1:1040323/143‑1 (MQ=38)               tATGCGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTACTGTGAGGTACGCGGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGGGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCt                                                         >  1:376120/1‑143 (MQ=255)                       gttgGGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTACTGTGAGGTATGCTGGAGGTATCAGAAGTGCGCATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGATTCATGTCCAACg                                                 >  1:130518/1‑143 (MQ=255)                             tgggggAGCGTTGTGTACGACTGTGAAGGTGTACTGTGAGGTATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATc                                           <  1:58099/141‑1 (MQ=255)                               ggtgatcGTTCTGTAAGGCTGTGAAGGTGTACTGTGAGGTATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTGCCTGTCCAACGTTAATCgg                                         <  2:298079/137‑1 (MQ=255)                               ggggTGCGTTGTGTAAGCCTGGGAAGGTGGACTGTGAGGTATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATCgg                                         <  1:794215/143‑1 (MQ=255)                                 ggAGCGTTCTGTAAGCCTGTGAAGGTGTACTGTGAGGTATGCTGGAGGCATCAGAAGCGCGCATGCTGACATAAGTAACGATAACGCGGGTGCAACGCCCGCTCGCCGCAAGACCAAGGGTTCCTGTCCAACGTTAATCgggg                                       <  2:520520/143‑1 (MQ=11)                                  gAGCGTTCTGTAAGCCTGTGAAGGTGTACTGTGAGGTATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTTCTGTCCAACGTTAATCGGAGc                                      >  2:996648/1‑143 (MQ=25)                                  gAGCGTTCTGTAAGCCTGTGAAGGTGTACTGTGAGGTATGATGGAGGAATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCACGGGTTCCTGTGCAACGTTAATCggggg                                      >  1:475131/1‑142 (MQ=255)                                       ttCTGTAAGCCTGTGAAGGTGTACTGTGAGGTATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGCCCAAGGGTTCCTGGCCAACGTTAATCGGGGCAgggg                                 >  2:990202/1‑142 (MQ=25)                                       ttCTGTAAGCCTGTGAAGGTGTACTGTGAGGTATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATCGGGGCAGGGt                                 <  2:955409/143‑1 (MQ=34)                                       ttCTGTAAGCCTGTGAAGGTGTACTGTGAGGTATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAACCAGGGCAGGGt                                 >  1:564610/1‑143 (MQ=21)                                         cTGTAGGCCTGTGAAGGTTTACTGTGAGGTACGCTAGAGGTACCAGAAGGGCGAATGCTGACATAAGTAACGATATAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCATGTCCAACGTTACTCGGGGCAGGGTGa                               <  2:443544/143‑1 (MQ=11)                                          tGTAAGCCTGTGAAGGTGTACTGTGAGGTAGGCTGGAGGTATCAAAAGGGCAATGGCTAAAATAAGAAACTATAACGCGGGTGAAAAGCCCGCGCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATCGGGGCAGGGTGAg                              <  1:1033645/143‑1 (MQ=11)                                           gTAAGCCTGTGAGGGTGTACTGTGAGGTCTGCTGGGGGGATCAGAAGTGCGAATGCTGACAGAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATCGGGGCAGGGTGAGt                             <  1:300321/143‑1 (MQ=11)                                            tAAGCCTGTGAAGGTGTACTGTGAGGTATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCGAACGCTAATCGGGGCAGGGAGAGTc                            >  1:827227/1‑143 (MQ=255)                                              aGCCTGTGAAGGTGTACTGTGAGGTATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATCGGGGCAGGGTGAGTCGa                          <  2:848365/143‑1 (MQ=34)                                               gCCTGTGAAGGTGGACTGGGAGGTATGCTGGAGGTATCAGAAGTGCGAATGCTGACGTAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATCGGGGCAGGGTGAGTCGAc                         <  1:292039/143‑1 (MQ=255)                                                ccTGTGAAGGTGTACTGTGAGGTATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATCGGGGCAGGGTGAGTCGAcc                        >  1:379495/1‑143 (MQ=35)                                                 cTGTGAAGGTGTACTGTGAGGTATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATCGGGGCAGGGTGAGTCGAccc                       <  1:862239/143‑1 (MQ=34)                                                 cTGTGAAGGTGTACGGTGGGGTATGCTGGAGGTATCAGAAGTGCGTATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATCGGGGCAGGGTGAGTCGAccc                       <  1:955905/143‑1 (MQ=255)                                                  tgtgAAGGTGTACTGTGAGGTATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGGGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGATAAGCGGGGGAGGGAGAGTGGAccca                      >  1:826529/1‑142 (MQ=11)                                                      aaGGTGTACCGTGAGGTATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATCGGGGCAGGGTGAGTCGACCCCTAAg                  <  1:63379/143‑1 (MQ=21)                                                               tgtgAGGTATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATCGGGGCAGGGTGAGTCGACCCCTAAGGCGAGGCCg         >  1:1000413/1‑143 (MQ=32)                                                               tgtgAGGTATGCTGGAGGTATCAGAACTGCAATCTCGGACATGGGTGAGGCAAAAGCGGGCGAAAAGCCCTCACGCCGGAAGACCAAGGTGTCCTGTCCAACGCGAAGCGGGGCAGGGGGAGGCGACGCCTAAGGCGGGGCCg         >  1:986910/1‑143 (MQ=255)                                                                      tATGCTGGAGGTATCAGAAATACGAATACTGACATAAGTAACGATAAAGCGGGTGAAAAGCACGCTCGCCGGAAGACCAAGGGTTCCTGTCAAACGTTAATCGGGGCAGGGTGAGTCGACGCCTAAGGCGAGGCAGAAAggag  >  1:152805/1‑141 (MQ=11)                                                                                                                                       |                                                                              GCGGCAGCGACGCTTATGCGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTACTGTGAGGTATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATCGGGGCAGGGTGAGTCGACCCCTAAGGCGAGGCCGAAAGGCG  >  NC_000913/226918‑227129

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.