New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3679526 =	46 (0.760)	5 (0.080)	5/274	7.9	9.9%	coding (109/930 nt)	kdgK	2‑dehydro‑3‑deoxygluconokinase
	?	NC_000913	3679544 =	46 (0.780)					coding (127/930 nt)	kdgK	2‑dehydro‑3‑deoxygluconokinase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GCTAATTTTTTACAGATCAGGTTCACGACTATGTCCAAAAAGATTGCCGTGATTGGCGAATGCATGATTGAGCTTTCCGAGAAAGGCGCGGACGTTAAGCGCGGTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCTGACCCAACGGATGGAAAACCGTC  >  NC_000913/3679388‑3679667                                                                                                                                           |                                                                                                                                              gCTAATTTTTTACAGATCATGTCCACGACTATGTCCAAAAAGATTGCCGTGATTGGCGAATTCATGATTGAGCTTTCCGATAAAGGCGCGTACGTTAAGCGCGGTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATCGc                                                                                                                                           <  2:185125/143‑1 (MQ=255) gCTAACTTTCTACAGATCCCGTTCACGACTCTGTCCAAAAAGATTGCCGTGATTGGCGAATGCATGATTGAGCTTTCCGAGAAAGGCGCGGACGTTAAGCGCGGTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATCGc                                                                                                                                           <  2:76210/143‑1 (MQ=255)   tAATTTTTGACAGATCAGGTTCACGACTATGTCCAAAAAGATTGCCGTGATTGGCGAATGCATGATTGAGCTTTCCGAGAAAGGCGCGGACGTTAAGCGCGGTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATCGccc                                                                                                                                         <  2:277913/143‑1 (MQ=255)       tttttACAGATCAGGTTCACGACTATGTCCAAAAAGATTGCCGTGATTGGCGAATGCATGATTGAGCTTTCCGAGAAAGGCGCGGACGTTAAGCGCGGTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATCGCCCGTCa                                                                                                                                     >  2:434777/1‑143 (MQ=255)          ttACAGTTCAGGTTTACGACCATGTCCAAGTAGATTGCCGTGATTGGCGGATGCATGATTGAGCTTTCCGAGAAAGGCGCGGACGTTAAGCGCGGTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATCGCCCGTCAGGt                                                                                                                                  <  1:236520/143‑1 (MQ=255)             cAGAGCAGGTTCACGACTATGTCCAAAAAGATTGCCGTGATTGGCGAATGCATGATTGAGCTTTCCGAGAAAGGCGCGGACGTTAAGCGCGGTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATCGCCCGTCAGGTCGa                                                                                                                               <  1:482143/143‑1 (MQ=255)              aGATCAGGTTCACGACTATGTCCAAAAAGATTGCCGTGATTGGCGAATGCATGATTGAGCTTTCCGAGAAAGGCGCGGACGTTAAGCGCGGTTTCGGCGGCGGTACCCTGAACACTTCCGTCTATATCGCCCGTCAGGTCGAt                                                                                                                              >  2:869328/1‑143 (MQ=255)                aTCAGGTTCACGACTATGTCCAAAAAGATTGCCGTGATTGGCGAATGCATGATTGAGCTTTCCGAGAAAGGCGCGGACGTTAAGCGCGGTTTCGGCGGCGATACCCTGAACACTTCCGTCCATAACGCCCGACAAGACGATca                                                                                                                            >  1:1009560/1‑142 (MQ=255)                aTCAGGTGTCCGTCTATGTCCAAAAAGATTGCCGTGATTGGCGAATGCATGCTTCAGCTTTCCGATAAAGGCGCGGACGTTAAGCGCGGTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATCGCCCGTCAGGTCGATcc                                                                                                                            <  2:29249/143‑1 (MQ=255)                      ttCACGACTAGGTCAAAAAACCGTGCCGTGATTGGCGAATGCATGATTGAGCTTTCCGAGAAAGGCGCGGACGTTAAGCGCGGTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGc                                                                                                                      <  1:924477/143‑1 (MQ=255)                       tCACGACTATGTCCAAAAAGATTGCCGTGATTGGCGAATGCATGATTGAGCTTTCCGAGAAAGGCGCGGACGTTAAGCGCGGTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCa                                                                                                                     >  2:513035/1‑143 (MQ=255)                       tCACGACTATGTCCAAAAAGATTGCCGTGATTGGCGAATGCATGATTGAGCTTTCCGAGAAAGGCGCGGACGTTAAGCGCGGTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCa                                                                                                                     <  1:954882/143‑1 (MQ=255)                         aCGACTATGTCCAAAAAGATTGCCGTGATTGGCGAATGCATGATTGAGCTTTCCGAGAAAGGCGCGGACGTTAAGCGCGGTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCAtt                                                                                                                   >  2:70205/1‑143 (MQ=255)                            aCTATGTCCAAAAAGATTGCCGTGATTGGCGAATGCATGATTGACCTTTCCGAGAAAGGCGCGGACGTTAAGCGCGGTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCATTAAc                                                                                                                <  2:405067/143‑1 (MQ=255)                               aTGTCCAAAAAGATTGCCGTGATTGGCGAATGCATGATTGAGCTTTCCGAGAAAGGCGCGGACGTTAAGCGCGGTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCATTAACCGt                                                                                                             <  2:179338/143‑1 (MQ=255)                                  tCCAAAAAGATTGCCGTGATTGGCGAATGCATGATTGAGCTTTCCGAGAAAGGCGCGGGCGTTAAGCGCGGTTTCGGCGGCGATACCCTGAGCACTCCCGGCGATACCCCCCGGCAGGCCGCACCAGGCGCAGTCACCGTTCa                                                                                                          >  1:899077/1‑143 (MQ=255)                                  gccAAAAAGGTTGCCGTGATTGGCGCAGGCATGATTGAGCTTTCCGAGAGAGGCGCGGACGTTAAGCGAGCGTTCGGCGGCGATACCCTGAACCCTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCATTAACCGTTCa                                                                                                          <  1:576827/142‑1 (MQ=255)                                  gccAAAAAGATTGCCGGGATTGGCGAATGCATGATTGAGCTTTCCGAGAAAGGCGCGGACGTTAAGCGCGGTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCATTAACCGTTCa                                                                                                          <  2:928357/142‑1 (MQ=255)                                    cAAAAAGATTGCCGTGATTGGCGAATGCATGATTGAGCTTTCCGAGAAAGGCGCGGACGTTAAACGCGATTTGGGCGGCGATACCCTGAACACTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCATTAACCGTTCAtt                                                                                                        >  2:668606/1‑143 (MQ=255)                                     aataagtgtGCCGTGATTGGCGCGTGCATGATTGAGCTTTCCGAGAAAGGCGCGGACGTTAAGCGCGGTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCATTAACCGTTCATTa                                                                                                       <  1:736119/135‑1 (MQ=255)                                     aaaaaGATTGCCGTGATTGGCTGACGCATGATTGAGCTTTCCGAGAAAGGCGCGGACGTTAAGCGCGGTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCATTAACCGTTCATTa                                                                                                       <  2:714608/143‑1 (MQ=255)                                      aaaaGATTGCCGTGATTGGCGAATGCTTTATTGAGCTTTCCGAGAAAGGCGCGGACGTTAAGCGCGGTGTCGGCGGCGATACCCTGAACACTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCATTAACCGTTCATTAc                                                                                                      <  2:872370/143‑1 (MQ=255)                                                cGTGATTGGCGAATGCATGATTGAGCTTTCCGAGAAAGGCGCGGACGTTAAGCGCGGTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATGGCCCGTCAGGTCGATCCTGCGGCGTTACCCGGTGATTACGTGACGgcgc                                                                                            >  2:78077/1‑143 (MQ=255)                                                  tGATTGGTGAATGCATGGTTGGGCTTTCCGAGGATTGCGGGGACGTGAAGCGCGGTTTCGGCGGCGATACCCTGAACGCTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCATTAACCGTTCATTACGTAACGGCGCTg                                                                                          <  1:65787/143‑1 (MQ=255)                                                  ggagtGGCGAATGCATGAGGGAGCTGTCCGGGAAGGGCGCGGACGTTAAGCGCGGTGTCGGCGGCGATACCCGGAACGCTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCATTAACCGTTCATTACGTAACGGCGCTg                                                                                          <  1:245547/139‑1 (MQ=255)                                                      tGGGGAATGCAGGATTGAGGTTCCCGAGAAAGGCGCGGGTGTTAAGGGCGGTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCATTAACCGTTCATTACGTAACGGCGCTGGGaa                                                                                      <  2:225043/143‑1 (MQ=255)                                                          gAATGCATGATGGAGCTTTCCGAGAAAGGCGCGGACGTTAAGCGCGGTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGa                                                                                  <  2:968433/143‑1 (MQ=255)                                                           caTGCCTGATTGAGCTTTCCGAGAAAGGCGCGGACGTTAAGCGCGGTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGAc                                                                                 <  2:904785/142‑1 (MQ=255)                                                                   aTTGAGCTTTCCGAGAAAGGCGCGGACGTTAAGCGCGGTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCATTAACCGTTCGTTACGTAACGCGGCCGGGAACGGACAGATTTAg                                                                         >  2:11838/1‑143 (MQ=255)                                                                    ttGAGGTTTGCGCGAACTGCGCGGACGTTAAGCGCGGTTTCGCCGGCGATACCCTGAACACTCCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCATTACCCGTTCATTTCATAACGGCGCTGGGAACGGACAGTTTTAGc                                                                        <  1:871673/143‑1 (MQ=255)                                                                           ttCCGGGTATGGCGCGGACGTTAAGCGCGGTTTCGGCGGCGCTCCCCTGATCTCTTCCTTCTATATCGCCCGTCAGGGCGATCCTGCGGCATTAACCGTTCATTACGTATCGGCGCTGGGAACGGACAGTTTTAGCCAGCAGa                                                                 <  1:885012/143‑1 (MQ=255)                                                                              cGAGAAAGGCGCGGACGTTAAGCGCGGTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATCGCACGTCAGGTCGATCCTGAGGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATgg                                                              >  2:350586/1‑142 (MQ=255)                                                                               gagaAAGGCGCGGACGTTAAGCGCGGTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAgctgct                                                             >  2:114969/1‑143 (MQ=255)                                                                                  aaaGGCGCGGACGTTAAGCGCGGTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATAGCCCGTCAGGTCGATCCTGCGGCAGTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGa                                                          <  1:525010/143‑1 (MQ=255)                                                                                    aGGCGCGGACGTTAAGCGCGGTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATAGCCTGTCAGGGCGATCCTGCGGCACTCACCGTTCATTCCGTAACGGAGCTGGGACCGGACAGTTTTAGCCAGCAGATGCTGGACg                                                        >  1:803726/1‑143 (MQ=255)                                                                                                tAAGCGCGGTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCGTTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCg                                            >  2:951022/1‑143 (MQ=255)                                                                                                     gcgGTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGCTGCTGGACGCCTGGCACGGCGAGAAc                                       >  2:429684/1‑143 (MQ=255)                                                                                                        gTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGtt                                    <  2:70667/143‑1 (MQ=255)                                                                                                        gTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGtt                                    <  1:429684/143‑1 (MQ=255)                                                                                                        gTTTCGGCGGCGAGACCCGGAGCCCTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCATTAACCGTGCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGtt                                    <  1:988924/143‑1 (MQ=255)                                                                                                                   gATACCCTGAACACTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCt                         <  1:434777/143‑1 (MQ=255)                                                                                                                      aCCCCGAACCCTTCCGTCTATACCGCCCGTCAGGTCGATCCTGCGGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCTGAc                      <  2:473279/143‑1 (MQ=255)                                                                                                                        ccTGAACACTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGGTACTTCCCTGAccc                    >  1:682065/1‑143 (MQ=255)                                                                                                                                 ttCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCATTAACCGTTCATTACGTAACGGCGCTGGGAACAGACAGTTTTAGCCACCAGATGCTGGACGCCTGCCACCCCCTGAACCTTGATACGCCCCGGACCCCACgcgcgc           >  1:314606/1‑138 (MQ=255)                                                                                                                                      gcTATATCGCCGGTGGGGTCGGTCCGGCGGCATTAGGCGTTCATTACGTAAGGGCGCGGGGAGCGGACAGTTTTAGCCAGCAGATGCTGGACGGCTGGGACGGCGAGAACGTTGATACTTCCCTGACCCAACGGATGGAAAAc      <  1:248067/142‑1 (MQ=255)                                                                                                                                          tatCGCCCGTCAGGTCGATCCTGCGGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCTGACCCAACGGATGGAAAACCGTc  <  2:661650/143‑1 (MQ=255)                                                                                                                                           |                                                                                                                                              GCTAATTTTTTACAGATCAGGTTCACGACTATGTCCAAAAAGATTGCCGTGATTGGCGAATGCATGATTGAGCTTTCCGAGAAAGGCGCGGACGTTAAGCGCGGTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCTGACCCAACGGATGGAAAACCGTC  >  NC_000913/3679388‑3679667

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.