New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2290110NA (NA)77 (0.990) 54/282 0.3 97.5% intergenic (‑31/+2) insH1/yejO IS5 transposase and trans‑activator/pseudogene, autotransporter outer membrane homology,putative transport, Not classified, putative ATP‑binding component of a transport system
?NC_000913 = 3526451 2 (0.030)intergenic (‑304/‑16) nudE/yrfF adenosine nucleotide hydrolase, Ap3A/Ap2A/ADP‑ribose/NADH hydrolase/putative RcsCDB‑response attenuator, inner membrane protein

AAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGCTCCATAC  >  NC_000913/2289970‑2290248
                                                                                                                                            |                                                                                                                                            
aaGAAAATCGCGTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCa                                                                                                                                            <  2:1149298/143‑1 (MQ=11)
    aaaTCTCTTTGCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATTATCTCATATCAGGGACTTGTTCGCACCTTCCATAAc                                                                                                                                       <  1:279116/143‑1 (MQ=18)
       tctcTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGGTGAACCCTGTTCTATGGCTCCAGATGACACACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCt                                                                                                                                    >  1:165999/1‑143 (MQ=25)
         tctTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTGGATGACTGATGATGAGCCCTGTTCTATGGCTCCAGATGACAAACGGGGTCTCAGATCAGGGACTGGTTCGGGCCTTCCATAGCGCTGt                                                                                                                                 >  1:1166769/1‑143 (MQ=11)
               ctcggcTGGCGGCGCTGACTGGTGAATTCACTCTCGGCGAAGGGAAGCTGATGACTCATGATGAACCCTGTTGTATGGCTCCAGATGACAAACATGAGCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGccac                                                                                                                           <  2:1334209/138‑1 (MQ=14)
                 ggTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGccacca                                                                                                                         <  1:1255613/143‑1 (MQ=255)
                    cTGACGGCGCGTACTGCTGAATTGACTGTTGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGaa                                                                                                                      <  2:346387/143‑1 (MQ=255)
                     tGACGGCGCTTCCTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAAc                                                                                                                     <  2:1122039/143‑1 (MQ=255)
                      gACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGCGACTTGTTCGCACCTGCCATAACGCTGTAGCCACCAGAACa                                                                                                                    <  2:1193276/143‑1 (MQ=255)
                         ggCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGaa                                                                                                                 >  2:132480/1‑142 (MQ=255)
                            gcTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGACCAGATAtt                                                                                                              >  2:182928/1‑143 (MQ=255)
                              ttACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGc                                                                                                            >  1:1241803/1‑143 (MQ=255)
                              ttACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTGCTAGGGCTCCAGATGACAAACATGATCTAATATCAGGGACTTGTTCGCACCGTGCATAACGCTGTAGCCACAAGCACAGatataga                                                                                                            >  2:485647/1‑140 (MQ=14)
                              gtACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGc                                                                                                            >  1:198276/2‑143 (MQ=255)
                                aCTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACGAACATGATCTCATATCAGGGACTTGTTCGCACCGTCCATAACGCTGTATCCACCAGAAAAGATATTGCgc                                                                                                          >  2:698032/1‑142 (MQ=255)
                                  tgctgAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCCGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGaa                                                                                                        >  2:510808/1‑143 (MQ=255)
                                         ttCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCCCCTTCCATAACGCTTTCGCCACCAGAACAGCTCTTGCGGACCGACacc                                                                                                 >  1:1079344/1‑141 (MQ=17)
                                         ttCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACaaa                                                                                                 >  1:745272/1‑143 (MQ=255)
                                         ttCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACaaa                                                                                                 >  1:1187260/1‑143 (MQ=255)
                                              tGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCACATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATCTGGCGGACCGACAAAGAGaa                                                                                            >  2:223511/1‑143 (MQ=255)
                                               gtgggCGGAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAATCCTGATCTCATATCAGGGACTTGTTCGCACCTTCCATCACGTTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGaaa                                                                                           <  2:231227/140‑1 (MQ=18)
                                               gccGGCGAAGGTAAGTTGATCACCCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGaaa                                                                                           <  1:1135441/141‑1 (MQ=255)
                                               gTCCGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCGATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGaaa                                                                                           <  1:1108866/143‑1 (MQ=255)
                                                tCGGCGAAGGTAAGTTGATGACTCATGCTGAAACCAGACCACAGCGTACAGGTGAGAGACATGAGCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAAc                                                                                          <  1:929009/143‑1 (MQ=21)
                                                tCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAAc                                                                                          >  1:700200/1‑143 (MQ=255)
                                                tCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAAc                                                                                          >  1:775937/1‑143 (MQ=255)
                                                  ggCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGCCACAGAGCACCAg                                                                                        >  1:111472/1‑143 (MQ=255)
                                                     gAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGACATTGACTAACGACAAAGAGAGACAGAAc                                                                                     >  1:915983/1‑143 (MQ=18)
                                                      aaGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAAcc                                                                                    >  1:662518/1‑143 (MQ=255)
                                                            aGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAAACAGATTg                                                                              >  1:129066/1‑143 (MQ=255)
                                                              ttGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCGGTAGCCACCAGGACAGATATTACGCGGCGACGAATGCAAACAGAGCCAGCTTGAt                                                                            >  1:849427/1‑143 (MQ=17)
                                                                  gtaCTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCCCCTTCCATAACGCTGTAGCCACGAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCAt                                                                        <  2:1051688/141‑1 (MQ=255)
                                                                    aCTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTg                                                                      >  1:65650/1‑143 (MQ=255)
                                                                      tCATGATGAACCCTGTTCTCTGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGGGGGACGACAAAGAGAAACAGACCCCGATTGATGCACTGAg                                                                    >  2:1051350/1‑143 (MQ=25)
                                                                      tCATGATGAACCCTGTTCTATGGCTCCAGATGCCAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGCACGACAACGAGAAACAGCCCCAGATCGACGCACTgcg                                                                    >  2:509321/1‑141 (MQ=21)
                                                                      tCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAg                                                                    >  1:178660/1‑143 (MQ=255)
                                                                       cATGATGAACCCTGTTCTATGGCGCCGGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCGTCCATAACGCTGTATCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGc                                                                   <  2:1261413/143‑1 (MQ=255)
                                                                         tgatgaCCCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCtt                                                                 <  1:1035134/143‑1 (MQ=255)
                                                                         tgatgaACCCTGTTCTATGGCTCCAGATGCCAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCtt                                                                 <  2:1300286/143‑1 (MQ=255)
                                                                         tgatgaACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCAATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGCCAAAGAGAAACAGAACCAGGTTGATGCATTGAGCtt                                                                 >  1:815497/1‑143 (MQ=255)
                                                                          gatgaACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCttt                                                                >  1:1294194/1‑143 (MQ=255)
                                                                          gatgaACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCttt                                                                <  1:1322582/143‑1 (MQ=255)
                                                                           gtgaACACTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGGTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACTACCAAGAGAAACAGAACCAGATTGATGCATTGGTCTTTc                                                               >  2:1302114/2‑143 (MQ=25)
                                                                             gaACCCTGTTGTATGGCTCCACATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCGTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCAt                                                             <  2:156840/143‑1 (MQ=255)
                                                                              aaCCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATc                                                            <  2:729811/143‑1 (MQ=255)
                                                                                 ccTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCGGAACAGATATTGCGGAACGACAAAGAGAGACAGAACCAGATTGATGCATTGAGCTTTCATCCTa                                                         >  1:28769/1‑143 (MQ=255)
                                                                                 ccTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTa                                                         >  1:125420/1‑143 (MQ=255)
                                                                                 ccTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTa                                                         <  2:439343/143‑1 (MQ=255)
                                                                                 ccTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTa                                                         >  1:595342/1‑143 (MQ=255)
                                                                                     ttCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGaa                                                     >  1:1152581/1‑143 (MQ=255)
                                                                                     ttCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGaa                                                     <  1:599057/143‑1 (MQ=255)
                                                                                          tGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGCACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGCTTGATGCATTGAGCTCTCATCCTATGAaattaa                                                >  1:334153/1‑143 (MQ=255)
                                                                                             cTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTg                                             >  2:1133418/1‑143 (MQ=255)
                                                                                               ccAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGTACCAGATTGATTCATTGAGCTTTCATCCTATGAAATTAATTGCt                                           <  1:1296710/143‑1 (MQ=255)
                                                                                                cAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTg                                          >  2:866051/1‑143 (MQ=255)
                                                                                                  gATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGtt                                        <  1:973368/143‑1 (MQ=255)
                                                                                                     gataaaCATGATCACATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTaaa                                     <  1:644702/140‑1 (MQ=255)
                                                                                                        aaaCATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGc                                  >  1:1110768/1‑143 (MQ=255)
                                                                                                          aCATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCAt                                >  2:683829/1‑143 (MQ=255)
                                                                                                           cATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCAtt                               <  1:634459/143‑1 (MQ=255)
                                                                                                           cATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCAtt                               <  2:120483/143‑1 (MQ=255)
                                                                                                           cATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCAtt                               <  1:868410/143‑1 (MQ=255)
                                                                                                           cATGATCTCATATCAGGGACGTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTaaccgtatt                               <  2:1042177/143‑8 (MQ=255)
                                                                                                            aTGATCTCATATCAGGGACTTGTTCGTACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTg                              <  2:945723/143‑1 (MQ=255)
                                                                                                             tggtctgctatCAGGGACGTTTTCGCACGTTGTATAAAGCAGTAACCACCAGAACAGATATTGCGGAACGATTAAGAGCAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTgg                             <  2:1175412/135‑1 (MQ=255)
                                                                                                             tGACCTCATATCAGGGACTTGTTCGCACCTTCCATAAAGCTGTAGCCACCAGAACAGATATTGCTGAACGACAAAGAGAATCAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTgg                             <  2:426187/143‑1 (MQ=255)
                                                                                                              gATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGCACGACACAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTggg                            >  2:63412/1‑143 (MQ=255)
                                                                                                               aTCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGt                           >  1:889075/1‑143 (MQ=255)
                                                                                                                tctcATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTa                          >  2:1268031/1‑143 (MQ=255)
                                                                                                                tctcATATCAGGGACTTGTTCGCACCGTCAGAAACACGGAGGCCAACAGCAGAGATATTGCGGAACGACAAAGGGAAACAGGACGAGAGTGATGCATTGAGCTTTCATCCTAGGAAATTAATTGCTGTTAAAAGCATTaggca                          >  2:1266165/1‑141 (MQ=255)
                                                                                                                tctcATATCAGGGACTTGTTCG‑‑CCTTCATCAAGCGCCGCTATCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTa                          >  2:1119024/1‑143 (MQ=255)
                                                                                                                 ctcATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTAc                         >  2:302959/1‑143 (MQ=255)
                                                                                                                    atatCAGGTACCTGTTCGCACCTGTCATAACGCGGTAGTCACCAGAACAGATATTGCGGAACGACAAAGAGGAACAGAACCAGATTGATGCATTTAGCTTTCCTCCTATGAACTTAATTGCTGTTAAAAGCATTGGGTACAGa                      <  2:95580/143‑1 (MQ=255)
                                                                                                                    atatCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGa                      >  1:946160/1‑143 (MQ=255)
                                                                                                                      atCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTACTGTTAAAAGCATTGGGTACAGaaa                    >  2:635847/1‑143 (MQ=255)
                                                                                                                      atCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACAAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGaaa                    >  1:1204317/1‑143 (MQ=255)
                                                                                                                        cAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAGATTAATTGCTGTTAAAAGCATTGGGTACTGaaaac                  >  2:1895/1‑142 (MQ=255)
                                                                                                                          gtgggttGGTCGCACCTTGCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATAc                <  2:461157/138‑1 (MQ=255)
                                                                                                                           ggACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATAcc               <  1:1133418/143‑1 (MQ=255)
                                                                                                                             aCTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGCGCCACAGAACCAGATTGATGCATTGAGCTTTCAGCCTATGAAATTAATTGCTGTTAAAGGCATTGGGCACCGCAAAGACCCa             >  2:977466/1‑143 (MQ=255)
                                                                                                                             aCTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCa             >  1:79683/1‑143 (MQ=255)
                                                                                                                               ttGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATa           >  2:173595/1‑143 (MQ=255)
                                                                                                                               ttGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATa           >  1:346428/1‑143 (MQ=255)
                                                                                                                               ttGTGCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATa           <  1:752205/143‑1 (MQ=255)
                                                                                                                                tGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAg          <  1:745003/143‑1 (MQ=255)
                                                                                                                                   tCGCACATTCAATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGCTc       <  1:654963/143‑1 (MQ=255)
                                                                                                                                    cGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTAAAAAGCATTGGGTACAGAAAATACCCATAGCTcc      >  1:157568/1‑143 (MQ=255)
                                                                                                                                        ccTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGCTGCATTGAGCTTTCATCCTATGCAATTAATTGCTGATAAAAGCATTGGTTACGGAAAAAACCCATAGCTCCacac  >  2:929617/1‑143 (MQ=255)
                                                                                                                                            |                                                                                                                                            
AAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGCTCCATAC  >  NC_000913/2289970‑2290248

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.