| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4325806 = | NA (NA) | 6 (0.090) +TACAAATTCCCGCACCCTCCGTAG |
4/236 | 9.7 | 7.1% | noncoding (4/583 nt) | REP325 (repetitive extragenic palindromic) element, contains 12 REP sequences | REP325 (repetitive extragenic palindromic) element, contains 12 REP sequences |
| ? | NC_000913 | 4326252 = | 95 (1.210) | noncoding (450/583 nt) | REP325 (repetitive extragenic palindromic) element, contains 12 REP sequences | REP325 (repetitive extragenic palindromic) element, contains 12 REP sequences | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GATAAGACGCGCAAGCGTCGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCA > NC_000913/4326111‑4326391 | gATAAGACGCGCAAGCGTCGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCGGGCAGTCTGCACCGTTGc > 1:490276/1‑143 (MQ=255)gATAAGACGCGCAAGCGTCGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGc < 1:174011/143‑1 (MQ=37)gATAAGACGCGCAAGCGTCGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGc < 1:829724/143‑1 (MQ=37)gATAAGACGCGCAAGCGTCGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGc > 1:1213157/1‑143 (MQ=38) aTAAGACGCGCAAGCGTCGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGAAGTGGGGACCGGTGcc > 2:876605/1‑143 (MQ=255) tAAGACGCGCCAGCGTCGCATCAGGCAGTTGGCTCTGTTGCCTGATGCGGCGTAAACGCCTTAGCCGGACTCCCGAGGGCGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCg < 2:75066/143‑1 (MQ=11) aaGACGCGCAAGCGTCGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCg‑g > 1:956415/1‑143 (MQ=39) aaGACGCGCAAGCGTCGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCg‑g > 1:1296003/1‑143 (MQ=38) gcgcAAGCGTCGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGGAAGCGGCGCATCAGGCAGCCGGCACCGGTGCCG‑GCTggc > 2:754497/1‑141 (MQ=11) gcgcAAGCGTCGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCACGCGTCGCATCAGGCAGTCGGCCCCGTTGCCG‑GATgcc > 1:230198/1‑142 (MQ=255) gcgcAAGCGTCGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGAGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCG‑GATgcg > 1:697948/1‑143 (MQ=38) gTCGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGAAGCGGATGCAGCGCATCAGGCAGTCGGCACCGTTGCCG‑GGTGGGGCGTaagc > 1:254830/1‑141 (MQ=11) gCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGTAAACGcc > 1:710268/1‑143 (MQ=35) aGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGTAAACGCCTTATc > 1:211347/1‑143 (MQ=35) gCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGCCGGCACCGTTGCCG‑GATGCGGCGGAACCGCCTTATCCg > 2:1042099/1‑143 (MQ=255) gtcggcagctgtggcGGATGCGGGGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGcc < 2:782703/129‑1 (MQ=11) ttGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTAGGGAGGGTGCGGGAATGTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCGGCCCGCACCGTTGCCG‑GCGGCGGCGTAAGCGCCTCAGCCGGccg > 2:413936/1‑142 (MQ=11) ggCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCCGGCAGTCGGCCCCGTTGCCG‑GATGCGGCGGAAACGCCTTATCCGGACtcc > 1:475221/1‑141 (MQ=255) ggCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCG‑GATgcggcg < 1:274108/122‑1 (MQ=33) ggCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGCAAGCGCCCTATCCGGctcac > 2:16214/1‑139 (MQ=255) ggCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGCCGGCACCGTTGCCG‑GATGCGGCGCGACCGCCCTATCCGGCCtgc > 2:121252/1‑141 (MQ=11) gcgcTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACg > 2:312738/4‑143 (MQ=17) ttGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGt > 1:1307233/1‑143 (MQ=32) gCCGGATAAGGCGTTTACGCCGCATCCGGCCTACGCAGGGCGCGGGCATTTGTAGGCCTGATCAGACGCGCAGGCGTCGCGTCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGTAAGCGCCTTATTCGGCGTACGGAgggcgt > 1:1036052/1‑140 (MQ=11) ccGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCCTAAACGCCTTATCCTGCCTACGGAGGGTGCg < 1:1227815/143‑1 (MQ=17) aTGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGAGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCGCCGTTGCCG‑GATGCGGCGCAAACGCCTTATCCGGCCTACCGAGGAGGCgggga > 2:550285/1‑141 (MQ=11) cggcgTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGCCGGTACCGTTGCCG‑GATGCGGCGCGAGCGCCTTATCCGGCCGCCGGGGGGAGCggggagtt > 2:564005/1‑138 (MQ=11) gcgTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGt > 1:742286/1‑143 (MQ=32) gcgTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGt > 1:1126163/1‑143 (MQ=32) gcgTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGGAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTGGt > 1:1103721/1‑143 (MQ=17) gcgTAAACGCCATATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGGGCGGGAATTTGt > 1:752548/1‑143 (MQ=17) gCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGCGTGCGGGAATTTGTAGGCCTgc > 2:768661/1‑142 (MQ=17) cTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGTACACGCCTTATCCGGCCTACGGAGGGGGCGGGAAGTTGTGGGCCTGATa > 1:1187249/1‑143 (MQ=255) gtgcggggcgcGGTGGGTGCGGGTGTGGGGAGGCCGGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGa < 2:138272/133‑1 (MQ=11) ggctccGGGGGGTGCGGTAATTTGTAGGCTTGATCAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACgcgc < 2:999675/138‑1 (MQ=11) gCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTa < 1:625105/126‑1 (MQ=33) gCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTa > 2:625105/1‑126 (MQ=32) ccgaCGGAGGGTGCGGGAATTTGGAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCa < 1:1047519/140‑1 (MQ=17) tACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGCAAACGCCTTATCCGGCCTACGGAGGGTGCGGGGATGTGTGCGCTTGATCAGACGCGGAAg > 2:178543/1‑143 (MQ=11) cGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCg > 1:109522/1‑143 (MQ=32) ggggggggggggTATTGGTAGGCGTGAGGAGGCGCGCTGGCGTCGCAGCAGGCAGTGCGGATCGGGGCGG‑GAGGCGGCGGAGACGCCTTATCCGGCCGACGGAGGGGGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGt < 2:894852/134‑1 (MQ=2) gAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATa < 2:52545/128‑1 (MQ=32) gggTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCAGAGATG‑GACATAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGAcgcttgcgcgtctt < 1:1359316/143‑12 (MQ=11) tGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGCGAACGCCTTATCCGGCCTACGGAGCGCGAGGGAAGTGGTACGTCTTGTAAGAcgcggacggccggctcc > 2:717858/1‑130 (MQ=11) gCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCa < 1:275340/143‑1 (MQ=32) cGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGTAACCGCCTTATCCGGCCTACGGAGGGTGCGGGAATCTGTAGGCCTGCTAAGACGCGCAAGCGCCGCacccg > 1:1201412/1‑139 (MQ=11) cGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCt < 1:1025567/117‑1 (MQ=33) cGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCt > 2:1025567/1‑117 (MQ=32) gggAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGGAGTCGGCACCGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGACTTTGTAGGCCTGATAAGACGCGCAAGGGgcgcgtgcgg > 1:595666/1‑137 (MQ=11) gggAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGCTAAGACGCGCGAGCGTCGCATCAgg > 2:1199092/1‑143 (MQ=17) gggAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATCAGACGCGCAAGCCTCGcccccgc > 1:515087/1‑137 (MQ=255) gggAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGGCGGCACCGTTGCCG‑GAGGCGGCGCAAACGCCCTATCCGGCCGACGGAGCGAGGGGGAATTGGTAGAGCGGAGGACACGCGCaacagccgtctcagg > 2:429268/1‑130 (MQ=2) aTTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATc > 1:1267672/1‑143 (MQ=33) ttGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTg < 1:391282/143‑1 (MQ=35) tGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCACCTgg < 1:63410/143‑1 (MQ=18) tAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGCAAACGCCTTATCCGGCCTACGGAGGGCGCGGGAATATGTACTCCTGATCACACCCGCAAGCCGCGCATCACGCagcgcgcg > 2:867492/1‑136 (MQ=11) gCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCACGCGTCGCATCAGGCATCTGGCAcag > 2:1128779/1‑141 (MQ=37) ccTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGGATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGt > 2:622555/1‑143 (MQ=255) cTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTg < 1:381003/95‑1 (MQ=34) cTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTg > 2:381003/1‑95 (MQ=33) cTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTa < 1:8721/97‑1 (MQ=34) cTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGtt > 1:1324170/1‑143 (MQ=40) cTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGACCGACGGAGGGTGGGGGGGGAACCAGGCCTGATAAGACGCGCAAGCGCCGCACCAGGCATCTGGCACCgat > 2:1326637/1‑141 (MQ=14) tGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAg < 2:74635/97‑1 (MQ=33) tGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGc > 2:723726/1‑99 (MQ=33) tGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGc < 1:723726/99‑1 (MQ=34) tGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTg > 1:173205/1‑143 (MQ=40) gATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGc > 1:1364193/1‑143 (MQ=255) aTAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGTAAACGGCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTCGGCCTGATAAGACGCGCGAGGGTCGCAGCAGGCAGGTGGCACCGTTAcc > 2:413481/1‑143 (MQ=11) aTAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGcc < 1:442696/143‑1 (MQ=40) aTAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGcc < 1:699865/143‑1 (MQ=255) gACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGGTAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGAt > 1:772599/1‑143 (MQ=255) gCGTCCCACCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGa < 1:719582/143‑1 (MQ=255) ggcGCCTCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAgc < 1:413481/141‑1 (MQ=255) gTCGCATCAGGCAGTCGGCACCATTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGAGAAAGAGTCGCATGATTCATCCGGCAACGGTGCCgactgcctgatgcga < 1:1297547/143‑15 (MQ=11) tCGCATCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGACTTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGAGGCGGCGCGAgcg > 2:1011735/1‑143 (MQ=255) tCGCATCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCt < 2:15306/83‑1 (MQ=33) tCGCATCAGGCAGTCGGCACCATTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGGATTTGTAGGCCTGATAAGAAGCGCAAGCGGCGCAGCAGGCCGCAGGCACCGAAGGCGAATACAGCGCAAgcg > 2:1314478/1‑143 (MQ=11) cGCATCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGc < 2:1077728/110‑1 (MQ=32) gCATCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATa < 2:321879/85‑1 (MQ=35) cATCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCt > 2:553627/1‑143 (MQ=255) aTCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAGTTTGTGGGCCTGATAAGACGCGCAAGCGTCGCATCCGGCATCTGCCCCCGTTGCCGGCTGCGGCGCGCGCGccct > 2:1199933/1‑141 (MQ=14) aTCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCtt < 1:890407/143‑1 (MQ=255) aGGCAGTCGGCACCGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAAt < 2:725361/66‑1 (MQ=37) ggCAGTCGGCACCGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAg < 2:507434/101‑1 (MQ=32) gCAGTTGGCACTGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATATGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGCTGGCACCGTTGCCGGATGCGGCCGGCGCGCCTTAGCCg > 2:426017/1‑143 (MQ=11) gCAGTCGGCACCGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGCAGGCCTCATAAGACGCGCAAGCGTCGCATCAGGCATCTGGAACCGTTTCCCGATGCGTCGCGAGTGCCTTCTccc > 2:681503/1‑142 (MQ=14) cAGTCGGCACCGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGc < 1:924022/71‑1 (MQ=34) cAGTCGGCACCGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCgg < 1:564005/143‑1 (MQ=255) gTCGGCACCGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCt < 1:550285/143‑1 (MQ=255) aCCGTTGCCG‑GGTGCTTCCTAAACGCGTTGTCCGGCCTACGGAGGGTGCGGGAGTTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGa < 2:469519/143‑1 (MQ=18) ccGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGAt < 1:876605/143‑1 (MQ=255) cGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGc < 1:671220/61‑1 (MQ=31) cGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGc < 1:671266/61‑1 (MQ=31) ggtGCCG‑GACGCGGCGTAACCGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATca < 1:745867/141‑1 (MQ=255) gTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATca < 1:553627/143‑1 (MQ=255) | GATAAGACGCGCAAGCGTCGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCG‑GATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCA > NC_000913/4326111‑4326391 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |