New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1979486 =	3 (0.040)	115 (1.470)	68/284	0.0	97.5%	intergenic (‑271/‑267)	insA/uspC	IS1 repressor TnpA/universal stress protein
	?	NC_000913	2101749 =	NA (NA)					intergenic (‑5/+146)	wbbL/insH1	pseudogene, lipopolysaccharide biosynthesis protein/IS5 transposase and trans‑activator

CTTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGT  >  NC_000913/2101608‑2101882                                                                                                                                               |                                                                                                                                      cTTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACAAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTACTATAG‑GAGTTTATGATTTATTaagg                                                                                                                                      >  2:805562/1‑143 (MQ=255)  ttCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTaagga                                                                                                                                     >  2:249284/1‑143 (MQ=255)  ttCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCCTTAG‑GAATTTTTGTTTTATTcagga                                                                                                                                     >  2:637122/1‑143 (MQ=255)    cacaGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GCATTTTTGTTTTATTaaggaag                                                                                                                                   >  2:497468/1‑143 (MQ=255)       aGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTCTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTg                                                                                                                                >  2:235540/1‑143 (MQ=255)       aGTACATAAAGTAAACTTGATCGAAGCCATTTACACAAACAAAATCTGAAAAACGTACAAGCATAAATAATCCTACGCACCAATCAACAACCGTATAAGAATAATTTCTTTTATTAG‑AAATATTTATTTTATTaaggattgtg                                                                                                                                >  2:534057/1‑138 (MQ=255)           cATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGaa                                                                                                                            >  1:686757/1‑143 (MQ=255)            aTAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAAt                                                                                                                           >  2:441317/1‑143 (MQ=255)            aTAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAAt                                                                                                                           >  1:903774/1‑143 (MQ=255)            aTAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACGTTCGTTAG‑GAATTTTTGTTTTATGAAGGAAGGTGCGGAt                                                                                                                           >  2:381319/1‑143 (MQ=255)                     ccTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGa                                                                                                                  <  2:466908/143‑1 (MQ=255)                      cTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGaa                                                                                                                 >  2:495872/1‑143 (MQ=255)                      cTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGaa                                                                                                                 >  1:1127253/1‑143 (MQ=255)                       ttGATCGAAGCCATTTACACGCACACAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGaaa                                                                                                                <  2:1358993/143‑1 (MQ=255)                       ttGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTAACGGCGGATATGATCCTGCGCACCACTCAAAGACCGTATCAGAATAGATACTTACTTTCG‑GAAGTTTTGTTTTATTCATGAAGGTGCGAATTAGCGCGGaaa                                                                                                                >  2:96739/1‑143 (MQ=255)                          aTCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGGAAttc                                                                                                             >  1:1258256/1‑143 (MQ=255)                           tCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAACttct                                                                                                            >  2:1187334/1‑143 (MQ=255)                           tCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAAttct                                                                                                            >  1:904871/1‑143 (MQ=255)                            cGACGCCATTTACAAGCACAAGAGCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAGCCGTATCAGAATAGATACTTTCTTTAG‑GAATTCTTGTTTCATTAAGGAAGGTGCGAATAAGCGGGGAAAttctt                                                                                                           <  2:1192232/143‑1 (MQ=255)                              aaGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATtcttct                                                                                                         <  1:7535/143‑1 (MQ=255)                                   aTTTACACGCACAAAATCTGAAAAACGTACCAGCATCCATGCTGTTGCCCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCt                                                                                                    <  2:1322420/143‑1 (MQ=38)                                   aTTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTAGTTTTATTAAGGAAGGAGCGAATAAGCGGGGAAATTCTTCTCGGCt                                                                                                    >  2:810514/1‑143 (MQ=255)                                         acGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGATGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCa                                                                                              >  2:1142996/1‑143 (MQ=255)                                         acGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCACAATAGATCCTTTATTTAG‑GAATTTTGGGTTTACAATGGAAGGTGCGAATAACAGGGGAAATTCTTCTCGACGGACTCa                                                                                              >  2:166559/1‑143 (MQ=255)                                             acaAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtca                                                                                          >  1:204719/1‑143 (MQ=255)                                               caaaTCTGCAAAACGTACCCGCATAAATGATCCTGCGCACCAATCGACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtcatt                                                                                        <  2:999910/142‑1 (MQ=255)                                               aaaaTCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGTCTGACTCAGtcatt                                                                                        >  2:1012399/1‑143 (MQ=255)                                               aaaaTCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtcatt                                                                                        >  2:250449/1‑143 (MQ=255)                                                 caTCTGAAAGACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtcatttc                                                                                      <  1:1067674/142‑1 (MQ=255)                                                 aaTCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtcatttc                                                                                      >  1:13982/1‑143 (MQ=255)                                                   tcagAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtcatttcat                                                                                    <  1:821544/140‑1 (MQ=255)                                                   tCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtcatttcat                                                                                    >  1:909751/1‑143 (MQ=255)                                                   tCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACGTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtcatttcat                                                                                    <  2:899689/143‑1 (MQ=255)                                                     tGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTcatttcattt                                                                                  <  1:802354/143‑1 (MQ=255)                                                       aacaaCGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCCTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATttct                                                                                <  2:1096625/140‑1 (MQ=255)                                                         aaaCGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTCTCAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGCCTCAGTCATTTCATttcttc                                                                              >  2:476960/1‑143 (MQ=255)                                                             gttccAGCATAAATGATCCTGCGCACCAATCAACAGCCGGATCAGAA‑AAAAACACCGTTGGGTGTGTTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGt                                                                          <  1:993541/140‑1 (MQ=17)                                                                    aaTAAATGATCCCGCGCCGCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGcc                                                                   <  2:986625/142‑1 (MQ=255)                                                                     aTAAATGATCCTGCGCACCAATCAACAACCGTATCAGACTAGTTAATTTCTGTGG‑CTTAATTGGTTTTTTTAGGAAAGCGGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCg                                                                  >  1:315767/1‑143 (MQ=17)                                                                       aaaTGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGAt                                                                >  1:909947/1‑143 (MQ=255)                                                                           gATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGAttttt                                                            <  2:686757/143‑1 (MQ=255)                                                                            aTCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGAtttttt                                                           <  1:1316840/143‑1 (MQ=255)                                                                                tGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTcc                                                       >  2:766335/1‑143 (MQ=255)                                                                                tGCGCACCAATCAACAACCGTATCAGAATAGATACGTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTcc                                                       <  2:1292213/143‑1 (MQ=255)                                                                                    cACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAACCGATTTTTTCTCCCGTa                                                   >  1:678416/1‑143 (MQ=255)                                                                                     aCCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTaa                                                  <  2:963552/143‑1 (MQ=255)                                                                                       cAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCAAGTTTGAGCCGCTTTGTTCTCGTGTAAAt                                                >  1:1051019/1‑143 (MQ=21)                                                                                           caacaaCCGTATCAGAATAGATACCTTCTTTCA‑TATTTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCt                                            <  1:249284/143‑1 (MQ=18)                                                                                            aacaacCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATCCCtt                                           >  2:1228188/1‑143 (MQ=255)                                                                                            aacaacCGTAGCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCtt                                           <  2:620643/143‑1 (MQ=255)                                                                                              caacCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGTGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGACGATTTTTTTTCTCGTAAAtactttta                                         >  2:1241492/1‑136 (MQ=21)                                                                                              caacCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCCTTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGa                                         >  2:659851/1‑143 (MQ=255)                                                                                               ttccttATCAGTATCGGTACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGTCTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGaa                                        <  2:756131/138‑1 (MQ=17)                                                                                               aactctATCAGAATAGATATTTTCTTTAG‑AGATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTTATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGaa                                        <  2:496703/138‑1 (MQ=17)                                                                                                acCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTATTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCtttcat                                       >  2:1006961/1‑139 (MQ=255)                                                                                                   gTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAg                                    <  1:1062374/143‑1 (MQ=255)                                                                                                     aTCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTCAATGCCttttaacatcc                                  >  2:1168794/1‑134 (MQ=255)                                                                                                     aTCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCACTTCTTCATGGTGGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGcc                                  >  2:283646/1‑143 (MQ=255)                                                                                                        aGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTTATGTTTGAGCCGATTTTTTCTCCCGTAAATTTCTTGAATCAGCCtct                               >  2:717242/1‑141 (MQ=255)                                                                                                          aaTAGAGACTTTCTTTAG‑GAAGTTTTGTTGTATTAAGGGAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTAttt                             <  2:1153843/143‑1 (MQ=255)                                                                                                             aGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGa                          <  2:315767/143‑1 (MQ=255)                                                                                                               aTACTTTGTTTAG‑TAATTTTTGTTTTATTAAGTAAGGGTCGTATTAGTGGTGAACTTCTTCTCGGCTTACTCTGTCAGTTCATTTCTTCATGTTTGAGTCTATTTTTTCTTCCGTATATGCTTTGAATCAGCCTATTTAGAcc                        <  2:350582/143‑1 (MQ=14)                                                                                                               aTACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTAGGATGTCTCAACCATTTCATTTCTTCATGTTTGAGCCGCTTTTTTCTCCCGTCAATTCCTTGTTTCAGCCTCTTTGGAcc                        >  2:163451/1‑143 (MQ=17)                                                                                                                   tttctttAG‑GAATTTTTGTTTTATTAAGGAAGGTTCGATTAATCGGGTATTTTCTTCTTTGCTGCCTCTGTCAGTTCATGTCTTCATGTTTTATCCGATTTTTTCTCTCGTATATTCCTTGATTCAGGTTGTTTAGATCGttt                    >  2:1191651/1‑143 (MQ=255)                                                                                                                   tttctttAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGttt                    >  1:1319949/1‑143 (MQ=255)                                                                                                                   tttctttAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCGCCTGTAAATGCCTTGAATCAGCCTAATTTGACCGttt                    >  2:1252568/1‑143 (MQ=255)                                                                                                                    ttctttAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTttc                   <  2:788680/143‑1 (MQ=255)                                                                                                                     tctttAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTttct                  <  2:1127253/143‑1 (MQ=255)                                                                                                                       tttAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTttcttc                >  1:790619/1‑143 (MQ=255)                                                                                                                        ttAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCg               >  1:579632/1‑143 (MQ=255)                                                                                                                         tAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCTGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGc              <  1:684703/143‑1 (MQ=255)                                                                                                                          aG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCTGTAAATGCCTTTAATCAGCCTATTTAGACCGTTTCTTCGcc             >  2:38047/1‑143 (MQ=255)                                                                                                                          aG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGcc             >  2:218136/1‑143 (MQ=255)                                                                                                                             gAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCAt           >  2:1023439/1‑143 (MQ=255)                                                                                                                                  tttGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAg      <  1:242112/143‑1 (MQ=38)                                                                                                                                      ttttATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGGATCAGTCATTTAATTTCTTCATGTTTGAGCCGCTTTTTTCTCCCGTAAATGCCTTGAATCAGCCTGGTTCGACCCTTTATTCCCCGATTAAGGCGt  >  2:233528/1‑143 (MQ=11)                                                                                                                                      ttttATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCGTATTTAGACCCTTTCTTCGCCATTTAAGGCGt  >  2:383515/1‑143 (MQ=21)                                                                                                                                               |                                                                                                                                      CTTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGT  >  NC_000913/2101608‑2101882

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.