New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1979489	7 (0.090)	126 (1.610)	69/284	0.0	94.7%	intergenic (‑274/‑264)	insA/uspC	IS1 repressor TnpA/universal stress protein
	?	NC_000913	= 2290111	NA (NA)					intergenic (‑32/+1)	insH1/yejO	IS5 transposase and trans‑activator/pseudogene, autotransporter outer membrane homology,putative transport, Not classified, putative ATP‑binding component of a transport system

AAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGCTCCATACCCGGA  >  NC_000913/2289970‑2290253                                                                                                                                              |                                                                                                                                                 aaGAAAATCGCGTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCa                                                                                                                                                 <  2:1149298/143‑1 (MQ=11)     aaaTCTCTTTGCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATTATCTCATATCAGGGACTTGTTCGCACCTTCCATAA‑c                                                                                                                                            <  1:279116/143‑1 (MQ=18)        tctcTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGGTGAACCCTGTTCTATGGCTCCAGATGACACACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAA‑CGCt                                                                                                                                         >  1:165999/1‑143 (MQ=25)          tctTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTGGATGACTGATGATGAGCCCTGTTCTATGGCTCCAGATGACAAACGGGGTCTCAGATCAGGGACTGGTTCGGGCCTTCCATAG‑CGCTG‑t                                                                                                                                      >  1:1166769/1‑143 (MQ=11)                ctcggcTGGCGGCGCTGACTGGTGAATTCACTCTCGGCGAAGGGAAGCTGATGACTCATGATGAACCCTGTTGTATGGCTCCAGATGACAAACATGAGCTCATATCAGGGACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGccac                                                                                                                                <  2:1334209/138‑1 (MQ=14)                  ggTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGccacca                                                                                                                              <  1:1255613/143‑1 (MQ=255)                     cTGACGGCGCGTACTGCTGAATTGACTGTTGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGaa                                                                                                                           <  2:346387/143‑1 (MQ=255)                      tGACGGCGCTTCCTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAAc                                                                                                                          <  2:1122039/143‑1 (MQ=255)                       gACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGCGACTTGTTCGCACCTGCCATAA‑CGCTG‑TAGCCACCAGAACa                                                                                                                         <  2:1193276/143‑1 (MQ=255)                          ggCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGaa                                                                                                                      >  2:132480/1‑142 (MQ=255)                             gcTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGACCAGATAtt                                                                                                                   >  2:182928/1‑143 (MQ=255)                               ttACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGc                                                                                                                 >  1:1241803/1‑143 (MQ=255)                               ttACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTGCTAGGGCTCCAGATGACAAACATGATCTAATATCAGGGACTTGTTCGCACCGTGCATAA‑CGCTG‑TAGCCACAAGCACAGatataga                                                                                                                 >  2:485647/1‑140 (MQ=14)                               gtACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGc                                                                                                                 >  1:198276/2‑143 (MQ=255)                                 aCTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACGAACATGATCTCATATCAGGGACTTGTTCGCACCGTCCATAA‑CGCTG‑TATCCACCAGAAAAGATATTGCgc                                                                                                               >  2:698032/1‑142 (MQ=255)                                   tgctgAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCCGGGACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGaa                                                                                                             >  2:510808/1‑143 (MQ=255)                                          ttCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCCCCTTCCATAA‑CGCTT‑TCGCCACCAGAACAGCTCTTGCGGACCGACacc                                                                                                      >  1:1079344/1‑141 (MQ=17)                                          ttCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACaaa                                                                                                      >  1:745272/1‑143 (MQ=255)                                          ttCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACaaa                                                                                                      >  1:1187260/1‑143 (MQ=255)                                               tGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCACATATCAGGGACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATCTGGCGGACCGACAAAGAGaa                                                                                                 >  2:223511/1‑143 (MQ=255)                                                gtgggCGGAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAATCCTGATCTCATATCAGGGACTTGTTCGCACCTTCCATCA‑CGTTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGaaa                                                                                                <  2:231227/140‑1 (MQ=18)                                                gccGGCGAAGGTAAGTTGATCACCCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGaaa                                                                                                <  1:1135441/141‑1 (MQ=255)                                                gTCCGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCGATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGaaa                                                                                                <  1:1108866/143‑1 (MQ=255)                                                 tCGGCGAAGGTAAGTTGATGACTCATGCTGAAACCAGACCACAGCGTACAGGTGAGAGACATGAGCTCATATCAGGGACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAAc                                                                                               <  1:929009/143‑1 (MQ=21)                                                 tCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAAc                                                                                               >  1:775937/1‑143 (MQ=255)                                                 tCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAAc                                                                                               >  1:700200/1‑143 (MQ=255)                                                   ggCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGCCACAGAGCACCAg                                                                                             >  1:111472/1‑143 (MQ=255)                                                      gAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGACATTGACTAACGACAAAGAGAGACAGAAc                                                                                          >  1:915983/1‑143 (MQ=18)                                                       aaGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAAcc                                                                                         >  1:662518/1‑143 (MQ=255)                                                             aGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAAACAGATTg                                                                                   >  1:129066/1‑143 (MQ=255)                                                               ttGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAA‑CGCGG‑TAGCCACCAGGACAGATATTACGCGGCGACGAATGCAAACAGAGCCAGCTTGAt                                                                                 >  1:849427/1‑143 (MQ=17)                                                                   gtaCTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCCCCTTCCATAA‑CGCTG‑TAGCCACGAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCAt                                                                             <  2:1051688/141‑1 (MQ=255)                                                                     aCTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTg                                                                           >  1:65650/1‑143 (MQ=255)                                                                       tCATGATGAACCCTGTTCTCTGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGGGGGACGACAAAGAGAAACAGACCCCGATTGATGCACTGAg                                                                         >  2:1051350/1‑143 (MQ=25)                                                                       tCATGATGAACCCTGTTCTATGGCTCCAGATGCCAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGCACGACAACGAGAAACAGCCCCAGATCGACGCACTgcg                                                                         >  2:509321/1‑141 (MQ=21)                                                                       tCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAg                                                                         >  1:178660/1‑143 (MQ=255)                                                                        cATGATGAACCCTGTTCTATGGCGCCGGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCGTCCATAA‑CGCTG‑TATCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGc                                                                        <  2:1261413/143‑1 (MQ=255)                                                                          tgatgaCCCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCtt                                                                      <  1:1035134/143‑1 (MQ=255)                                                                          tgatgaACCCTGTTCTATGGCTCCAGATGCCAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCtt                                                                      <  2:1300286/143‑1 (MQ=255)                                                                          tgatgaACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCAATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGCCAAAGAGAAACAGAACCAGGTTGATGCATTGAGCtt                                                                      >  1:815497/1‑143 (MQ=255)                                                                           gatgaACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCttt                                                                     <  1:1322582/143‑1 (MQ=255)                                                                           gatgaACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCttt                                                                     >  1:1294194/1‑143 (MQ=255)                                                                            gtgaACACTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGGTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACTACCAAGAGAAACAGAACCAGATTGATGCATTGGTCTTTc                                                                    >  2:1302114/2‑143 (MQ=25)                                                                              gaACCCTGTTGTATGGCTCCACATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCGTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCAt                                                                  <  2:156840/143‑1 (MQ=255)                                                                               aaCCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATc                                                                 <  2:729811/143‑1 (MQ=255)                                                                                  ccTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCGGAACAGATATTGCGGAACGACAAAGAGAGACAGAACCAGATTGATGCATTGAGCTTTCATCCTa                                                              >  1:28769/1‑143 (MQ=255)                                                                                  ccTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTa                                                              >  1:125420/1‑143 (MQ=255)                                                                                  ccTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTa                                                              >  1:595342/1‑143 (MQ=255)                                                                                  ccTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTa                                                              <  2:439343/143‑1 (MQ=255)                                                                                      ttCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGaa                                                          <  1:599057/143‑1 (MQ=255)                                                                                      ttCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGaa                                                          >  1:1152581/1‑143 (MQ=255)                                                                                           tGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGCACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGCTTGATGCATTGAGCTCTCATCCTATGAaattaa                                                     >  1:334153/1‑143 (MQ=255)                                                                                              cTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTg                                                  >  2:1133418/1‑143 (MQ=255)                                                                                                ccAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGTACCAGATTGATTCATTGAGCTTTCATCCTATGAAATTAATTGCt                                                <  1:1296710/143‑1 (MQ=255)                                                                                                 cAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTg                                               >  2:866051/1‑143 (MQ=255)                                                                                                   gATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGtt                                             <  1:973368/143‑1 (MQ=255)                                                                                                      gataaaCATGATCACATATCAGGGACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTaaa                                          <  1:644702/140‑1 (MQ=255)                                                                                                         aaaCATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGc                                       >  1:1110768/1‑143 (MQ=255)                                                                                                           aCATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCAt                                     >  2:683829/1‑143 (MQ=255)                                                                                                            cATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCAtt                                    <  1:634459/143‑1 (MQ=255)                                                                                                            cATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCAtt                                    <  2:120483/143‑1 (MQ=255)                                                                                                            cATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCAtt                                    <  1:868410/143‑1 (MQ=255)                                                                                                            cATGATCTCATATCAGGGACGTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTaaccgtatt                                    <  2:1042177/143‑8 (MQ=255)                                                                                                             aTGATCTCATATCAGGGACTTGTTCGTACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTg                                   <  2:945723/143‑1 (MQ=255)                                                                                                              tggtctgctatCAGGGACGTTTTCGCACGTTGTATAA‑AGCAG‑TAACCACCAGAACAGATATTGCGGAACGATTAAGAGCAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTgg                                  <  2:1175412/135‑1 (MQ=255)                                                                                                              tGACCTCATATCAGGGACTTGTTCGCACCTTCCATAA‑AGCTG‑TAGCCACCAGAACAGATATTGCTGAACGACAAAGAGAATCAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTgg                                  <  2:426187/143‑1 (MQ=255)                                                                                                               gATCTCATATCAGGGACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGCACGACACAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTggg                                 >  2:63412/1‑143 (MQ=255)                                                                                                                aTCTCATATCAGGGACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGt                                >  1:889075/1‑143 (MQ=255)                                                                                                                 tctcATATCAGGGACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTa                               >  2:1268031/1‑143 (MQ=255)                                                                                                                 tctcATATCAGGGACTTGTTCGCACCGTCAGAAA‑CACGG‑AGGCCAACAGCAGAGATATTGCGGAACGACAAAGGGAAACAGGACGAGAGTGATGCATTGAGCTTTCATCCTAGGAAATTAATTGCTGTTAAAAGCATTaggca                               >  2:1266165/1‑141 (MQ=255)                                                                                                                 tctcATATCAGGGACTTGTTCG‑‑CCTTCATCAAGCGCCGCTATCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTa                               >  2:1119024/1‑143 (MQ=255)                                                                                                                  ctcATATCAGGGACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTAc                              >  2:302959/1‑143 (MQ=255)                                                                                                                     atatCAGGTACCTGTTCGCACCTGTCATAA‑CGCGG‑TAGTCACCAGAACAGATATTGCGGAACGACAAAGAGGAACAGAACCAGATTGATGCATTTAGCTTTCCTCCTATGAACTTAATTGCTGTTAAAAGCATTGGGTACAGa                           <  2:95580/143‑1 (MQ=255)                                                                                                                     atatCAGGGACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGa                           >  1:946160/1‑143 (MQ=255)                                                                                                                       atCAGGGACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTACTGTTAAAAGCATTGGGTACAGaaa                         >  2:635847/1‑143 (MQ=255)                                                                                                                       atCAGGGACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACAAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGaaa                         >  1:1204317/1‑143 (MQ=255)                                                                                                                         cAGGGACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAGATTAATTGCTGTTAAAAGCATTGGGTACTGaaaac                       >  2:1895/1‑142 (MQ=255)                                                                                                                           gtgggttGGTCGCACCTTGCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATAc                     <  2:461157/138‑1 (MQ=255)                                                                                                                            ggACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATAcc                    <  1:1133418/143‑1 (MQ=255)                                                                                                                              aCTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGCGCCACAGAACCAGATTGATGCATTGAGCTTTCAGCCTATGAAATTAATTGCTGTTAAAGGCATTGGGCACCGCAAAGACCCa                  >  2:977466/1‑143 (MQ=255)                                                                                                                              aCTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCa                  >  1:79683/1‑143 (MQ=255)                                                                                                                                ttGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATa                >  2:173595/1‑143 (MQ=255)                                                                                                                                ttGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATa                >  1:346428/1‑143 (MQ=255)                                                                                                                                ttGTGCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATa                <  1:752205/143‑1 (MQ=255)                                                                                                                                 tGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAg               <  1:745003/143‑1 (MQ=255)                                                                                                                                    tCGCACATTCAATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGCTc            <  1:654963/143‑1 (MQ=255)                                                                                                                                     cGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTAAAAAGCATTGGGTACAGAAAATACCCATAGCTcc           >  1:157568/1‑143 (MQ=255)                                                                                                                                         ccTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGCTGCATTGAGCTTTCATCCTATGCAATTAATTGCTGATAAAAGCATTGGTTACGGAAAAAACCCATAGCTCCacac       >  2:929617/1‑143 (MQ=255)                                                                                                                                              cATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGCTCCATACCCGGa  >  1:960771/1‑143 (MQ=255)                                                                                                                                              cATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGCTCCATACCCGGa  <  1:607686/143‑1 (MQ=255)                                                                                                                                              cATAA‑CGCTG‑TAGCCACCAGAACAGATAGTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCCTTCATCATATGAAATTACTTGCTGTTAAAAGCACTGGGTACAGAAAATACCCATAGCTCCATACCCGGa  <  2:265461/143‑1 (MQ=255)                                                                                                                                              |                                                                                                                                                 AAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAA‑CGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGCTCCATACCCGGA  >  NC_000913/2289970‑2290253

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.