New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2288917 =NA (NA)74 (0.950) 59/284 0.2 96.1% intergenic (‑5/+146) yejO/insH1 pseudogene, autotransporter outer membrane homology,putative transport, Not classified, putative ATP‑binding component of a transport system/IS5 transposase and trans‑activator
?NC_000913 3526447 = 3 (0.040)intergenic (‑300/‑20) nudE/yrfF adenosine nucleotide hydrolase, Ap3A/Ap2A/ADP‑ribose/NADH hydrolase/putative RcsCDB‑response attenuator, inner membrane protein

Only 100 of 155 total aligned reads displayed.

TGATATTCCGCCTTCAGAGGGTTTGCTATGATCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCAACGCCTTCGCGGATGCGCAA  >  NC_000913/3526305‑3526589
                                                                                                                                              |                                                                                                                                              
tGATATTCCGCCTTCAGAGGGTTTGCTATGATCAGCGTTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGacacac                                                                                                                                                >  1:952498/1‑143 (MQ=255)
 ggtgataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCt                                                                                                                                               <  2:446410‑M2/2‑1 (MQ=255)
        cGCCTTCAGAGGGTTTGCTATGATCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaag                                                                                                                                        <  1:454204‑M2/143‑5 (MQ=255)
         gCCTTCAGAGGGTTTGCTATGATCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGTAGAATCAAGTATTGTGTCGCGCGCTACCGACCACGCCTGACAGAcgagggcagg                                                                                                                                       >  2:653714/1‑134 (MQ=255)
         gCCTTCAGAGGGTTTGCTATGATCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaagg                                                                                                                                       <  2:722083‑M2/143‑6 (MQ=255)
            ttCAGAGGGTTTGCTATGATCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgc                                                                                                                                    >  1:1043999‑M2/1‑135 (MQ=255)
                    gcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGgggaaattc                                                                                                                            <  2:635058‑M2/21‑4 (MQ=255)
                    gcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgaggcagccgagaagaaattcacagcttattcgcacctgccCTACGTAACATGGGGAAAGCa                                                                                                                            >  2:1099585‑M2/123‑143 (MQ=255)
                     tttGCTATGAGCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtc                                                                                                                           >  1:911209‑M2/1‑126 (MQ=255)
                     cgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCAt                                                                                                                           <  1:552173‑M2/22‑1 (MQ=255)
                        gCTATCTTCAGCGGTTACTGTGATGGGCTTGATGAGGCTCAGGTTGAGCTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTACGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccct                                                                                                                        >  1:293423‑M2/1‑123 (MQ=255)
                          tATGATCAGCGTTTACTGTGATGTGCTTAATGCTGCTCAAGTTATACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctga                                                                                                                      >  1:393943‑M2/1‑121 (MQ=255)
                          tATGATCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctga                                                                                                                      >  1:16920‑M2/1‑121 (MQ=255)
                               tCCGCGGTTACTGTGATGTGCTTCATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACTGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatatga                                                                                                                 >  2:1103133‑M2/1‑116 (MQ=255)
                               tCAGCGGTTACTGTGATGTGCTTAATGCTGCTCAAGTTAAACTCCACGCTTGCCGATCGCCAACCGCAGAATCCTGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGCCCAAGgaaggtccggacaaggccctgctacga                                                                                                                 <  2:370226‑M2/143‑28 (MQ=255)
                               tCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAACCTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatatga                                                                                                                 >  1:317529‑M2/1‑116 (MQ=255)
                               tCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatatga                                                                                                                 <  2:1001556‑M2/143‑28 (MQ=255)
                               tCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatatga                                                                                                                 <  1:1117337‑M2/143‑28 (MQ=255)
                               gtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCAtt                                                                                                                 <  1:797247‑M2/32‑1 (MQ=255)
                                tctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATtg                                                                                                                >  1:122689‑M2/111‑143 (MQ=255)
                                 cgcGGTTAGTGTGCTGTGCTTTAGGGTGCTCAAGTTAAACTCCACGCTGGCCGCTAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTACGgaaggtgcgaacaagtccctgatatgaga                                                                                                               >  2:881003‑M2/2‑114 (MQ=255)
                                       tACTGTGATGTGGTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatatgagatcatgt                                                                                                         >  1:603712‑M2/1‑108 (MQ=255)
                                       aggctgagtcaaagcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGAtttt                                                                                                         <  1:1235061‑M2/40‑1 (MQ=255)
                                         ctctGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatatgagatcatgttt                                                                                                       >  1:975142‑M2/1‑106 (MQ=255)
                                         cTGTGATGTGTTTTATGATTCTCAATTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAAGCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatatgagatcatgttt                                                                                                       >  1:441776‑M2/1‑106 (MQ=255)
                                          tgtgATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttg                                                                                                      <  1:1157872‑M2/143‑39 (MQ=255)
                                          ctgattcaaggcctttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGAttttttt                                                                                                      <  1:475104‑M2/43‑1 (MQ=255)
                                          ctgattcaaggcatttacgggagaaaaaatcggctccaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGAttttttt                                                                                                      <  1:1059117‑M2/43‑1 (MQ=255)
                                           tgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAGGCGTGAGCACCATGGTGATTTTTTTa                                                                                                     >  1:988328‑M2/100‑143 (MQ=255)
                                           tgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTa                                                                                                     <  1:517965‑M2/44‑1 (MQ=255)
                                           tgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgaatccgccaagaagaatttccccgcttattagcaccttccCTAAGAAAGGTGGTGAAAGCAGAAGCACCATATGGATTTGTTTa                                                                                                     >  2:121751‑M2/100‑143 (MQ=255)
                                              aTGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcat                                                                                                  <  1:1145273‑M2/143‑43 (MQ=255)
                                               tgtgCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatc                                                                                                 >  1:1180496‑M2/1‑100 (MQ=255)
                                                gagctTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAACCAACCGCAGAATCATGTATTGTGTCAGGTACGACTGACCACGCCTGACAGACTAAGgaaggtgcgaaacagtccccgatatgagctcatgtatggcagct                                                                                                <  2:202437‑M2/141‑45 (MQ=255)
                                                 aaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGaaa                                                                                                                               <  1:756591‑M2/18‑1 (MQ=255)
                                                 aaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGaaa                                                                                                                               >  2:756591‑M2/94‑111 (MQ=255)
                                                  aggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagcatttccccgcttcttcgcaccttccCTAAGTCAGCTGGGGAACGCATGAGCACCCTTGCGCTCTTTTTagccgctc                                                                                              >  2:344472‑M2/93‑142 (MQ=255)
                                                     catttacgggagaaaagagcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatgtccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGc                                                                                           <  2:589935‑M2/54‑1 (MQ=255)
                                                       tttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTACATGCGTTGCTg                                                                                         >  2:730415‑M2/88‑143 (MQ=255)
                                                         tacgggagaaaaaatcttctcagacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGc                                                                                       <  2:164993‑M2/58‑1 (MQ=255)
                                                         gatgCTCAAGGTGAGGTAGACGGTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccata                                                                                       >  2:1246420‑M2/1‑90 (MQ=255)
                                                           cgggagaaagaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCt                                                                                     <  2:369681‑M2/60‑1 (MQ=255)
                                                            gggagaaaaaatcggctcaaacatgaagcaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGGAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTg                                                                                    <  1:859842‑M2/61‑1 (MQ=255)
                                                            gggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttgttcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGGTTTTTTTAGCTGCTTTGCTGGCCTg                                                                                    >  1:1224367‑M2/83‑143 (MQ=255)
                                                              tCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaaca                                                                                  <  1:318902‑M2/143‑59 (MQ=255)
                                                                gaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGCTTTTTTTCGCTGCTTTGCTGGCCTGCCCa                                                                                >  2:845439‑M2/79‑143 (MQ=255)
                                                                aaGTTTACCTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagg                                                                                >  1:1268318‑M2/1‑83 (MQ=255)
                                                                aaGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccccgacatgagctcatattcggcatctggagccacaaaccagg                                                                                <  2:1065494‑M2/143‑61 (MQ=255)
                                                                   ttAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggtt                                                                             <  2:131711‑M2/143‑64 (MQ=255)
                                                                   ttAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTAACAGACTAAGgaaggtgcgaacaagtccctgatatgagcacatgtttgtcatccggagcaatagaacagggta                                                                             <  2:491182‑M2/143‑64 (MQ=255)
                                                                       gcttcgcgctgggCGGTAGCCAACTGCGGGAGCATGTATTGTGTCCGGTGCGACTGACCACGGCTGACAGACTAAGgaaggtgcgagcgagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatc                                                                         >  2:560140‑M2/7‑76 (MQ=255)
                                                                          gctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttcaccgcttattcgcaccttcaCTGCGTGAGAAGTGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCgg                                                                      >  2:162448‑M2/69‑143 (MQ=255)
                                                                           cgcgggtgccgatGGCCAGCGGCTGAATCGTGTAGTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga                                                                     >  2:357792‑M2/7‑72 (MQ=255)
                                                                           cACGCTTGCCGATAGCCACCCGCGGAAGCATGTATTGTGCCCGGGGCGACTGACCGCGCCTGACAGACGAAGgaaggtgcgcataagtccctgatatggtgtcaggtttgtcatctggagccatagaacagggttcatcatga                                                                     >  1:604905‑M2/1‑72 (MQ=255)
                                                                           cACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatatgagatcaagtttgtcatccggagccatagaacaaggttcatcatga                                                                     <  2:819739‑M2/143‑72 (MQ=255)
                                                                           cACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCAAGCCTGACAGACTCAGgaaggtgcgaacaagtccctgatatgagatcctgtttgtcatctggagccctagaacagggttcatcataa                                                                     <  1:998186‑M2/143‑72 (MQ=255)
                                                                           cACGCGTGCCGATAGCCAACCGCAGAAGCATGTAGTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgatcaagtccctgatatgagatcatgtttggcatctggagccatagaacagggttcatcatga                                                                     >  1:1244076‑M2/1‑72 (MQ=255)
                                                                                ttGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGGCAGACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcat                                                                <  1:1147104‑M2/143‑77 (MQ=255)
                                                                                   ccGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatatgagctcatgtttgtcatctggagccatagaacaggagacagcatgagtgatcaa                                                             <  2:1160071‑M2/143‑80 (MQ=255)
                                                                                   ccGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaa                                                             >  1:476617‑M2/1‑64 (MQ=255)
                                                                                    ggcgacatgaaatgactgtgtcagcctagaaggatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGAt                                                            <  2:451351‑M2/85‑1 (MQ=255)
                                                                                    gaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGCAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGctgct                                                            >  2:360075‑M2/59‑141 (MQ=255)
                                                                                       tAGCCCACCCCATAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaactta                                                         >  2:876490‑M2/1‑60 (MQ=255)
                                                                                        aaatgacatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGGTTGctgattgtt                                                        <  2:296420‑M2/89‑5 (MQ=255)
                                                                                        aaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGTAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATaaaa                                                        <  1:769538‑M2/89‑1 (MQ=255)
                                                                                        aaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATaaaa                                                        <  1:719378‑M2/89‑1 (MQ=255)
                                                                                        aaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATaaaa                                                        <  1:1110248‑M2/89‑1 (MQ=255)
                                                                                          ccAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgcaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacct                                                      <  1:193988‑M2/143‑87 (MQ=255)
                                                                                           cAACCGCAGAATCATGCATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacctt                                                     <  1:641772‑M2/143‑88 (MQ=255)
                                                                                            gaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGCAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGCTAAAAGTGc                                                    >  2:1185474‑M2/51‑143 (MQ=255)
                                                                                              ccGCAGAATCATGTATTGTGTCCGGTGCGACTGAGCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatatgagagcatgtttgtcctctggaggcataggacagggatcatcatgagtcatcaaactaccttcgc                                                  <  2:1034589‑M2/143‑91 (MQ=255)
                                                                                              aatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGa                                                  <  1:417132‑M2/95‑1 (MQ=255)
                                                                                               atgcctgaggcagccgtgaggaatgtccccgcttattcgcaccttccCTAAGTAAGGTGGGGAAAGCATGAGCACCCTTGTGATTTTTTTAGCTTTGTTGCTGTCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGAt                                                 <  2:95458‑M2/96‑1 (MQ=255)
                                                                                                 cAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccga                                               <  1:949673‑M2/143‑94 (MQ=255)
                                                                                                 cAGAATCAGGTGTTGTGTCCGGTGGCACCGACCACGACTGACAGTCTAAGgaatgtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccga                                               >  2:1323242‑M2/1‑50 (MQ=255)
                                                                                                  actgaggcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCa                                              <  1:853816‑M2/99‑1 (MQ=255)
                                                                                                     gagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGGTGGACTCCATACGAGTTGCCGGCTGGCTGATCAAAGTGCCATCCAGAc                                           >  2:960530‑M2/42‑143 (MQ=255)
                                                                                                      tCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgccagtg                                          <  2:547213‑M2/143‑99 (MQ=255)
                                                                                                        aTGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcctgaacttaccttcgccgacagtgaa                                        <  1:183136‑M2/143‑101 (MQ=255)
                                                                                                        aTGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaa                                        >  1:967379‑M2/1‑43 (MQ=255)
                                                                                                        aTGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacatagcttcgacgacagggca                                        <  2:339786‑M2/143‑101 (MQ=255)
                                                                                                          gTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaatt                                      >  1:545569‑M2/1‑41 (MQ=255)
                                                                                                          gTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaatt                                      >  1:269913‑M2/1‑41 (MQ=255)
                                                                                                           tcttgtGTCGGGTGCGCCTGACCACGCCTGACAGACTAAGtaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattc                                     >  2:20711‑M2/3‑40 (MQ=255)
                                                                                                            aTTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattca                                    <  1:1125907‑M2/143‑105 (MQ=255)
                                                                                                               agaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCt                                 >  2:541277‑M2/32‑143 (MQ=255)
                                                                                                                tgtCCGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatatgagatcaggtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcag                                <  2:449433‑M2/143‑109 (MQ=255)
                                                                                                                   ccGGTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaa                             >  1:1361734‑M2/1‑32 (MQ=255)
                                                                                                                      tttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGGTCCAGACGGCGTCAGCTGCCCTgg                          >  1:1330067‑M2/25‑143 (MQ=255)
                                                                                                                      gTGCGACTGACCACGCCTGACAGACTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcggcgacagtgaattccgcagtaagcg                          <  1:675506‑M2/143‑115 (MQ=255)
                                                                                                                       tgccccgcgtatgcgcactttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTCCTTGCGCGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTTGa                         <  2:302329‑M2/120‑1 (MQ=255)
                                                                                                                          cccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCa                      >  1:101342‑M2/21‑143 (MQ=255)
                                                                                                                           ccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGGTGGCTGGTAAAAGTGCGATCCATACGGCGTCAGCTGCCCTGGACTaa                     >  1:1271857‑M2/20‑143 (MQ=255)
                                                                                                                           ccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGGTAACAGTGAGATCCAGTCGGAGTCACCTGCCCCGgaccca                     >  2:467767‑M2/20‑141 (MQ=255)
                                                                                                                             gcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGGTGCGCTGGACCAACg                   >  1:438469‑M2/18‑143 (MQ=255)
                                                                                                                             gcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAACCCGACTCTTCTGTCCTCGACCAACg                   >  2:1246110‑M2/18‑143 (MQ=255)
                                                                                                                               ttattcgcaccttccCGAAGTAAGATGGGGAAAGCATGAGCACCATTGTGAGTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCAACGcc                 <  2:993883‑M2/128‑1 (MQ=255)
                                                                                                                                     gcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCAACGCCTTcgcg           >  1:509315‑M2/10‑143 (MQ=255)
                                                                                                                                         cttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGGCCAACGCCTTCGCGGATg       >  1:1175729‑M2/6‑143 (MQ=255)
                                                                                                                                          ttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCATGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCAACGCCTTCGCGGCTgc      >  2:1350190‑M2/5‑143 (MQ=255)
                                                                                                                                              |                                                                                                                                              
TGATATTCCGCCTTCAGAGGGTTTGCTATGATCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCAACGCCTTCGCGGATGCGCAA  >  NC_000913/3526305‑3526589

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.