New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4295834 =NA (NA)11 (0.180) 5/276 8.1 91.7% noncoding (1/602 nt) RIP321 (repetitive extragenic palindromic) element, contains 11 REP sequences and 4 IHF sites RIP321 (repetitive extragenic palindromic) element, contains 11 REP sequences and 4 IHF sites
?NC_000913 4296262 = 1 (0.020)noncoding (429/602 nt) RIP321 (repetitive extragenic palindromic) element, contains 11 REP sequences and 4 IHF sites RIP321 (repetitive extragenic palindromic) element, contains 11 REP sequences and 4 IHF sites
Rejected: Coverage evenness skew score above cutoff.

GTGCTGGTGATTGCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTA  >  NC_000913/4295692‑4295973
                                                                                                                                              |                                                                                                                                           
gTGCTGGTGATTGCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAGTGTGTGAATg                                                                                                                                             >  2:520428/1‑143 (MQ=255)
    tGGTGATTGCCAAGTGGGAACACAAATTTGACCGTGAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATACTTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTg                                                                                                                                         >  2:565989/1‑143 (MQ=255)
    tGGTGATTGCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAGTGCGTGACTGCCTg                                                                                                                                         >  2:982261/1‑143 (MQ=255)
    tGGTGATTGCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTg                                                                                                                                         >  2:442/1‑143 (MQ=255)
    tGGTGATTGCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTg                                                                                                                                         >  1:382616/1‑143 (MQ=255)
      gTGATTGGCAAGTGGGATCACAAAGTTGACCGCAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTGGATAAAACTGCGGATCAATGATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGAt                                                                                                                                       <  1:758603/143‑1 (MQ=255)
           tGCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGAc                                                                                                                                  >  2:477931/1‑143 (MQ=255)
           tGCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGAc                                                                                                                                  >  2:1092112/1‑143 (MQ=255)
            gCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAACCTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACg                                                                                                                                 <  2:106478/143‑1 (MQ=255)
             ccAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGc                                                                                                                                >  2:900246/1‑143 (MQ=255)
             ccAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGc                                                                                                                                >  1:606766/1‑143 (MQ=255)
              cAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCt                                                                                                                               >  1:605211/1‑143 (MQ=255)
              cAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCt                                                                                                                               >  2:833174/1‑143 (MQ=255)
               aaGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCtt                                                                                                                              >  2:294780/1‑143 (MQ=255)
                      atcacaAATTTGCCCGCACGAAAGCGCTGGCTTCTGCGGGTGAAGTGCTGGGCACATTGGCTACACCTGCGCAGAAAGAATTCATGATTGCCGGGGATATCCCCCCGGTACTGTGGGAATGCCTGATGCGACGCTTGCCGCGt                                                                                                                       <  1:956713/141‑1 (MQ=255)
                      aaCACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGGGCTGGGCAAAGTTGATAGAACCGCGGATCAATAATGGAAGATTGCCGGGNANAACCACCCGGCAAGGCGGGAATGCCGGATGCGAAGCCTGAcgcgc                                                                                                                       >  1:504549/1‑142 (MQ=255)
                         acaGATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCtt                                                                                                                    >  1:109381/1‑143 (MQ=255)
                           aaaTTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTTCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTAt                                                                                                                  >  1:1098681/1‑143 (MQ=255)
                           aaaTTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGCTGCGACGCTTGCCGCGTCttgt                                                                                                                  >  2:429973/1‑141 (MQ=255)
                           aaaTTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTAt                                                                                                                  >  2:650978/1‑143 (MQ=255)
                           aaaTTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTAt                                                                                                                  >  1:277608/1‑143 (MQ=255)
                              tttGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAg                                                                                                               >  2:179356/1‑143 (MQ=255)
                                    cGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCttc                                                                                                         >  2:131434/1‑141 (MQ=255)
                                    cGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATGGAAGATTGCCGGGGATATCAACCCGGCAATGTGCGAATGCCTGATGCGACGCTTCCCGCGCCTGATCACGCCTAc                                                                                                         >  1:948104/1‑143 (MQ=255)
                                        aGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAATATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCa                                                                                                     >  1:550875/1‑143 (MQ=255)
                                        aGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCTCCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCa                                                                                                     <  2:522381/143‑1 (MQ=255)
                                         gAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGcccg                                                                                                    >  2:163867/1‑141 (MQ=255)
                                           aaGCGCTGGCTTATGAGCGTGAAGTGCGGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGAc                                                                                                  >  1:362107/1‑143 (MQ=255)
                                            aGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGAGGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACa                                                                                                 >  2:681996/1‑143 (MQ=255)
                                               gcTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAgcg                                                                                              >  2:381797/1‑143 (MQ=255)
                                                 tGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCa                                                                                            >  2:525047/1‑143 (MQ=255)
                                                     ttATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATCTCTAACCGGCACCCTGAGATCAGAGGAGTCGTCGCTTGCCGCGTCTTATCATGCCTACGCCAGACCGCGCAATAg                                                                                        >  1:776009/1‑143 (MQ=255)
                                                     ttATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAg                                                                                        <  2:584462/143‑1 (MQ=255)
                                                        tGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATGATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTCATCAAGCACACGCCAGACAGCGCCATAgacc                                                                                     >  1:253734/1‑140 (MQ=38)
                                                          aGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGa                                                                                   >  1:703494/1‑143 (MQ=255)
                                                            cGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCCGGCCTACGCCAGCCCGCGCAATAGCCTGAtt                                                                                 >  2:13420/1‑143 (MQ=255)
                                                                aaGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGc                                                                             <  2:654974/143‑1 (MQ=255)
                                                                      tGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCGATGTGTGCATGCCTGATGCGACGCTTGCCGCGTCTTCTCAGGCCTACGCCAGCCAGCGCAATAGCCTGACTTAGCGTGAtt                                                                       >  2:373322/1‑143 (MQ=37)
                                                                        ggCAAATTTGATAAAACTGCGGATCAATAATTGAAGATCGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGAtttt                                                                     <  2:581320/143‑1 (MQ=255)
                                                                         gCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTg                                                                    <  2:382616/143‑1 (MQ=255)
                                                                           aaaTTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTa                                                                  <  2:703494/143‑1 (MQ=255)
                                                                           aaaTTGGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTa                                                                  <  1:212102/143‑1 (MQ=255)
                                                                              tttGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACCGCGCAATCGCCTGATTTAGCGTGACTTTGTAGGt                                                               >  2:436015/1‑143 (MQ=255)
                                                                              tttGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAggc                                                               >  1:751381/1‑142 (MQ=255)
                                                                              ttctatcaatcggCGGCTCAATAATGAAATATTGCCTGGTATATCCCCCCTTCCATGTGTTAATGCCTTATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGACTTAGCGTGATTTTGTAGGt                                                               <  1:262215/131‑1 (MQ=14)
                                                                                 gagaagaCTGCGGAGCAATAATTGAAGATTGCCGGGGATATCAGCCCGGCAAGGTGTGAATGCCTGGTGCGACGCTTGCCGCTTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCgg                                                            <  1:741925/137‑1 (MQ=18)
                                                                                  aTAAAACTGCGGATCAATAGTTGAAGAGTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGa                                                           <  1:439281/143‑1 (MQ=255)
                                                                                  aTAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGa                                                           >  2:437495/1‑143 (MQ=255)
                                                                                             gctctatgatTGGAGGTTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCGGATGCGACGCTTGCCGCGACTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTa                                                <  1:486888/135‑1 (MQ=18)
                                                                                             gATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATACGGCGTTTa                                                >  2:129551/1‑143 (MQ=255)
                                                                                                      ttGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTAAGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATc                                       >  2:132264/1‑143 (MQ=255)
                                                                                                      ttGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGACTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTCGCGTGCTTCTGTCGGTTGTATAAGGCGTTTATGCGGCacc                                       >  2:1081411/1‑141 (MQ=18)
                                                                                                       tGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATcc                                      >  2:428879/1‑143 (MQ=255)
                                                                                                             ttGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATc                                <  1:1092112/143‑1 (MQ=255)
                                                                                                             ttGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATc                                <  2:384712/143‑1 (MQ=255)
                                                                                                                ccGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAAc                             >  2:636145/1‑143 (MQ=255)
                                                                                                                ccGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGAGTTTATGCCGcgtatgtatccaac                             >  2:243499/1‑130 (MQ=17)
                                                                                                                  ggggATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGACGGATAACGCGCTCATGCCGCATCCGACATCCACGc                           >  1:505377/1‑143 (MQ=17)
                                                                                                                     gATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGCCATCAACGCCTg                        >  2:705752/1‑143 (MQ=255)
                                                                                                                     gATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATGAACggcgg                        >  1:644516/1‑139 (MQ=255)
                                                                                                                      ttttccggccGGCGGTGTGTGTTTGTCTGATGTGTGGCTTGCCTCGTCTTCTGTGGCGTGTGCGAGGCCGCGCAAGAGCCTCATTTAGCGTGATTTTGTTGGGTCTTTAAAACGTTTATGCCGCATCCGACATCAACGCCTGa                       <  1:131434/135‑1 (MQ=2)
                                                                                                                        atCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCATGATTTACTGTGTTTTGTTTTGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATg                     <  2:1092728/143‑1 (MQ=17)
                                                                                                                         tCCACCCGGCAATGTGTGAATGCCTGATGAGAGGCGCGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGc                    >  1:899112/1‑143 (MQ=255)
                                                                                                                         tCCACCCGGCAAGGTGTGAATGCCTGATGCGACGGACCACGTTGTTGATCAGGCCGACGCCAGAGAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGc                    <  1:226633/143‑1 (MQ=14)
                                                                                                                           cACCCGGCAATGTGTGAATGCCTGATGCGACGCTGGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGa                  <  1:442/143‑1 (MQ=255)
                                                                                                                            gcctggCAACTTGCGAATTTCTGATGCGGCGCTTGCCGCTTCTTATCATGCCTACGCCACACAGCGCAATCGCTTGATGTAGCGTGATTTTTTATGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGAc                 <  1:452922/139‑1 (MQ=11)
                                                                                                                                   aaTGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAAc          <  2:12453/143‑1 (MQ=38)
                                                                                                                                   aaTGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTAAc          >  2:413635/1‑143 (MQ=38)
                                                                                                                                     tgtgtgGATGCCTGATGCCACGCTTGCCGCGTCTTTTCTGGCCTACGCCAGCCAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGTCATCAACGCCTGATGCGACGCTTAAcgc        <  1:343269/143‑1 (MQ=11)
                                                                                                                                       tgtgAATGCCTTATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCTCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGTATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGt      <  1:57192/143‑1 (MQ=255)
                                                                                                                                        gtgAGTGCCTGATGCGACGCTTGCCGCGTCGTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTc     <  1:679664/143‑1 (MQ=17)
                                                                                                                                         tgcaTGCCTGATGCGTCGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCATTGGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCt    <  1:102129/140‑1 (MQ=9)
                                                                                                                                           aaTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGATCGGATAAGGCGTTTATGCCGCATCCGACATCCACGCCTGCTGCGACGCTTAACGCGTCTTa  >  2:551953/1‑143 (MQ=12)
                                                                                                                                            aTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAgc                                                                                               >  2:587453/1‑49 (MQ=35)
                                                                                                                                              |                                                                                                                                           
GTGCTGGTGATTGCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGGGATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTA  >  NC_000913/4295692‑4295973

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.