New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4178480	60 (0.950)	5 (0.080)	5/270	8.0	8.3%	coding (35/429 nt)	rplK	50S ribosomal subunit protein L11
	?	NC_000913	= 4178483	54 (0.900)					coding (38/429 nt)	rplK	50S ribosomal subunit protein L11
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGCGTAAACATCATGGAATTCTGCAAAGCGTTCAACGCAAAAACTGATTCCATCGAAAAAGGTCTGCCGATTCCGGTAGTAATCAC  >  NC_000913/4178342‑4178624                                                                                                                                              |                                                                                                                                              tACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTCCCCAACTTGAGGAATTTATAATGGCTAAGAAGGGCCCAGCCTGTGTCACGCTGCAGGtt                                                                                                                                              >  2:266367/1‑143 (MQ=255)  aCAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTg                                                                                                                                             <  2:1078373/143‑1 (MQ=255)      tttCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAACCGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGc                                                                                                                                         <  2:489961/143‑1 (MQ=255)        gcgcgCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTGAGAGCAGGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTg                                                                                                                                       <  1:431537/142‑1 (MQ=255)         cgcgCCTTTTGTTTTCATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTgg                                                                                                                                      <  2:971548/143‑1 (MQ=255)          gcgcCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCTGGTTGCGGCTGGt                                                                                                                                     >  2:131141/1‑143 (MQ=255)          gcgcCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGt                                                                                                                                     >  2:758569/1‑143 (MQ=255)             ccTTTTGTTTTTATGTGCCTTGCCCGTAATACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATg                                                                                                                                  <  2:677330/143‑1 (MQ=255)                  tGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCGTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTag                                                                                                                             >  2:363708/1‑142 (MQ=255)                       ttATGGTCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGa                                                                                                                        <  1:385157/143‑1 (MQ=255)                       ttATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGa                                                                                                                        <  2:437915/143‑1 (MQ=255)                       ttATGGGCCTTGCCCGTAAAACGATTTTTAATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAATCCGa                                                                                                                        <  1:190065/143‑1 (MQ=255)                           gggCCGTGCCCGCAAAACGATTTTGTATATCACGGGGAGCCGTTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTcc                                                                                                                    <  2:487006/143‑1 (MQ=255)                              ccTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGCGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCCACCTGCGGGTTGCAGCTGGTATGGCTCACCAGAGgccgcc                                                                                                                 >  1:322050/1‑143 (MQ=255)                                 tGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGt                                                                                                              <  2:859298/143‑1 (MQ=255)                                   ccggTAAAACGAGTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAg                                                                                                            <  1:52991/140‑1 (MQ=255)                                      gTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTc                                                                                                         >  2:767750/1‑143 (MQ=255)                                         aaaCGATTTTTGATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACCTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCgg                                                                                                      <  2:317281/143‑1 (MQ=255)                                         aaaCGATCTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCgg                                                                                                      <  2:344062/143‑1 (MQ=255)                                          aaCGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACACGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGc                                                                                                     >  2:554544/1‑143 (MQ=255)                                            cgagtctttATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGctc                                                                                                   <  2:1019055/137‑1 (MQ=255)                                               ttttttATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAACGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTgg                                                                                                <  2:749717/143‑1 (MQ=255)                                                 ttttATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGt                                                                                              >  2:529138/1‑143 (MQ=255)                                                          aCGGTGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGc                                                                                     <  1:253783/143‑1 (MQ=255)                                                          aCGGGGCGCCTCGGGTAGGCGTTGTTCCGCAACTTGAGGCATTTATACTGGCTAAGAAAGTACAAGCCTATGTCCCGCTGCTGGTGGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGc                                                                                     <  1:259340/143‑1 (MQ=255)                                                          aCGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAAGGGCTGAGAAAGTACAAGCCTATGTCAAGCTACAGGTTGCAGAGCGTATAGCTAGCCCGAGTACGCCAGTAGGTCCGGCTCTGGGTCACCAGGGc                                                                                     >  1:1008513/1‑143 (MQ=255)                                                           cGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTACCCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCCCGGCg                                                                                    >  1:421511/1‑143 (MQ=255)                                                              ggAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCCGGGCGtcg                                                                                 >  1:739979/1‑141 (MQ=255)                                                                  cttctgAGAGGCGTTCTTCCCCAACTTGAGGAATTTATAAGGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGCGTAAAcat                                                                             <  1:759157/141‑1 (MQ=255)                                                                  ccTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGCGTAAAcat                                                                             >  1:1004606/1‑143 (MQ=255)                                                                   ctctCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGCGTAAAcatc                                                                            <  1:246966/143‑1 (MQ=255)                                                                    tctcAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAGGCTGGTGGGTCCAGGTGGTGTGGTTGACCTGAGGCCGCCAGTAGGTCCGGCCTCGGGTCAGCAGGGCGTACAcatca                                                                           >  1:1067481/1‑143 (MQ=255)                                                                    tctcAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGCGTAAAcatca                                                                           >  2:945465/1‑143 (MQ=255)                                                                    tctcAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGCGTAAAcatca                                                                           >  2:836545/1‑143 (MQ=255)                                                                     ctcAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGCGTAAAcatcat                                                                          <  2:368001/143‑1 (MQ=255)                                                                     ctcAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGCGTAAAcatcat                                                                          <  2:729255/143‑1 (MQ=255)                                                                      gcAGAGGGGTTATTACCCAACTTGAGGGATTTATAAGGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGGGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGCGTAAACATCATg                                                                         <  1:430060/142‑1 (MQ=255)                                                                      acAGAGGCGTTATCACCCAACTTGAGGAATCTATAAGGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGCGTAAACATCATg                                                                         <  2:97542/142‑1 (MQ=255)                                                                                           ttGAGGTATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGCGTAAACATCATGGAATTCTGCAAAGCGTTCAAc                                                    <  1:78777/143‑1 (MQ=255)                                                                                             gAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCGGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGCGTAGACATCATGGAATTCTGCAAAGCGTTCAACGc                                                  >  2:1079708/1‑143 (MQ=255)                                                                                             gAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCGGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGCGTAAACATCATGGAATTCTGCAAAGCGTTCAACGc                                                  >  2:844681/1‑143 (MQ=255)                                                                                             gAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGCGTAAACATCATGGAATTCTGCAAAGCGTTCAACGc                                                  >  2:51311/1‑143 (MQ=255)                                                                                                gAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGCGTAAACATCATGGAATTCTGCAAAGCGTTCAACGCaaa                                               >  1:352019/1‑143 (MQ=255)                                                                                                gAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGCGCACACCTCATGGAATTCTGCGCAGCGTTCAACGCgaa                                               >  2:488243/1‑143 (MQ=255)                                                                                                   tttATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGCGTAAACATCATGGAATTCTGCAAAGCGTTCAACGCAAAAAc                                            <  2:577244/143‑1 (MQ=255)                                                                                                      ataATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCATGTTGCAGCTGGTATGGCTAACCCAAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGCGTAAACATCATGGAATTCTGCAAAGCGTTCAACGCAAAAACTGa                                         >  1:383177/1‑143 (MQ=255)                                                                                                            gCTAAGAAAGTACAAGCCGATGTCAAGCTGCAGGTTGCAGCTGGTATGGGCCCGTCAAAACCTCCAGTAGGTCCGGCTCTGGGTCAGCAGGGCGTAAACATCATGGAATTCTGCAAAGCGTTCAACGCAAAAACTGATTCCAt                                   <  2:504170/143‑1 (MQ=255)                                                                                                               aaGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGCGTAAACATCATGGAATTCTGCAAAGCGTTCAACGCAAAAACTGATTCCATCGa                                >  2:483556/1‑143 (MQ=255)                                                                                                                  aaaGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGCGTAAACATCATGGAATTCTGCAAAGCGTTCAACGCAAAAACTGATTCCATCGaaaa                             >  2:755143/1‑143 (MQ=255)                                                                                                                  aaaGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGCGTAAACATCATGGAATTCTGCAAAGCGTTCAACGCAAAAACTGATTCCATCGaaaa                             >  2:815801/1‑143 (MQ=255)                                                                                                                        ccggCCTATGTAAAGCTGCAGTGTGCAGCTGGTATGGCTAACCCGAGTCCGCCATTAGGTCCGGCTCTGGGTCAGCAGGCCGTAAACATCATGGAATTCTGCAAAGCGTTCAACGCAAAAACTGATTCCATCGAAAAAGGTCt                       <  1:349319/140‑1 (MQ=255)                                                                                                                         aaGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGCGTAAACATCATGGAATTCTGCAAAGCGTTCAACGCAAAAACTGATTCCATCGACAAAGGTCTg                      >  1:1019053/1‑143 (MQ=255)                                                                                                                           tcctatgcgtagttGCAGGTTGCAGTGGGTATGGCTAACCCGGGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGCGTAAACATCATGGAATTCTGCAAAGCGTTCAACGCAAAAACTGATTCCATCGAAAAAGGTCTGcc                    <  1:471370/130‑1 (MQ=255)                                                                                                                           gtcTATGTCAAGCTGCAGGATGCAGCGGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGCGTAAACATCATGGAATTCTGCAAAGCGTTCAACGCAAAAACTGATTCCATCGAAAAAGGTCTGcc                    <  2:972628/141‑1 (MQ=255)                                                                                                                                      gCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGCGTAAACATCATGGAATTCTGCAAAGCGTTCAACGCAAAAACTGATTCCATCGAAAAAGGTCTGCCGATTCCGgtag         >  1:238261/1‑143 (MQ=255)                                                                                                                                        tGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGCGTAGACATCATGGAGTTCTGCAAAGCGTTCAACGCAAAAACTGATTCCATCCAAAAAGGTCTGCCGCTTCCGcaagta       >  1:100186/1‑143 (MQ=255)                                                                                                                                             gTTGCAGCTGGTACGCCCAACCCGCGTCCGCCAGTAGGTCCGCCTCTGGGTCAGCAGGGCGTAAACATCATGGAATTCTGCAAAGCGTTCAACGCAAAAACTGATTCCATCGAAAAAGGTCTGCCGATTCCGGTAGTAATCAc  <  2:197226/143‑1 (MQ=255)                                                                                                                                              |                                                                                                                                              TACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGCGTAAACATCATGGAATTCTGCAAAGCGTTCAACGCAAAAACTGATTCCATCGAAAAAGGTCTGCCGATTCCGGTAGTAATCAC  >  NC_000913/4178342‑4178624

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.