| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2196341 = | 51 (1.130) | 4 (0.090) | 4/266 | 5.8 | 7.8% | intergenic (+10/‑131) | metG/yehH | methionyl‑tRNA synthetase/DUF4132 family pseudogene, defective yehI paralog, molybdate metabolism regulator, first fragment, molybdate metabolism regulator, second fragment 2, yehI' molR mutations have phenotypes and the N‑terminal molR fragment of yehI' may be expressed and may have retained or evolved MolR function |
| ? | NC_000913 | 2196365 = | 47 (1.120) | intergenic (+34/‑107) | metG/yehH | methionyl‑tRNA synthetase/DUF4132 family pseudogene, defective yehI paralog, molybdate metabolism regulator, first fragment, molybdate metabolism regulator, second fragment 2, yehI' molR mutations have phenotypes and the N‑terminal molR fragment of yehI' may be expressed and may have retained or evolved MolR function | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TCGGTATCTCTGAAGGCATGGTGATGGCTGCCGGTCCTGGCGGGAAAGATATTTTCCTGCTAAGCCCGGATGCCGGTGCTAAACCGGGTCATCAGGTGAAATAATCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAATACTGGTAGCATCTGCATTCAACTGGATAAAATTACAGGGATGCAGAATGAGACACTTTATCTATCAGGACGAAAAATCAC > NC_000913/2196228‑2196505 | tctgtctcgctGAAGGCATGGTGATGGCTGCCCGTCCTGGCGGGAAAGACATTTTCCTGCTAAGCCCGGATGCCGGTGCTAAACCGGGTCATCAGGTGAAATAATCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCttt < 2:645954/134‑1 (MQ=255) tctGAGTGCATGGTGATGGGTGCCGGTCCTGGTGGGAAAGATATTTTCCTGCTAACCTCGGATGCCGGTGCTAAACCTGGTCAGCAGGTGAAATTATCCCCATTCAAGGCGCTGGATCGACAGCGCCTTTTCTTTATAAATTc < 2:405606/143‑1 (MQ=255) ctGAAGGCATGGTGATGGCTGCCGGCCCTGGCGGCAAAGATATTTTCCTGCTAAGCCCGGCTGCCGGTCCTAAACCGGGTCATCCGGTGCAACACTCCCCCTTCAACGCGCTGCATCGACACCCACTTTTCTCCATaactccc > 2:735748/1‑138 (MQ=255) aTGGTGATGGCTGCCGGTCCTGGCGGGAAAGATATTTTCCTGCTAAGCCCGGATGCCGGTGCTAAACCGGGTCATCAGGTGAAATAATCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAgttg > 1:447188/1‑143 (MQ=255) ggTGATGGCTGCGGGTCCTGGCGGGAAAGATATTTTCCTGCTAAGCCCGGATGCGGGTGCGAAACCGGGTCATCAGGTGAAATAATCGCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAgtggtg > 2:369093/1‑142 (MQ=255) gTGATGGCTGCCGGTCCTGGCGGGAAAGATATTTTCCTGCTAAGCCCGGATGCCGGTGCTAAACCGGGTCATCAGGTGAAATAATCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGttt < 2:482226/143‑1 (MQ=255) tGATGGCTGCCGGTCCTGGCGGGAAAGATATTTTCCTGCTAAGCCCGGATGCCGGTGCTAAACCGGGTCATCAGGTGAAATAATCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGtttt < 2:493148/143‑1 (MQ=255) cggcgggTCCTGGCGGGAAAGATATTTTCCTGGTAAGCCCGGATGCCGGTGCTAAACCGGGTAATAAAGGTAAATACAGTTAGGAGAAGTCTCTGCATCGACAGCGCATTTCCTTTATAGATTCCTAAAGTTGTTTTCTTGCg < 2:348236/138‑1 (MQ=255) cTGCCGGTCCTGGCGGGAAAGATATTTTCCTGCTAAGCCCGGATGCCGGTGCTAAACCGGGTCATCAGGTGAAATAATCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCCTTATAGATTCCTCAAGTTGTCTTCTTGCg > 2:294533/1‑143 (MQ=255) ccGGGCCTGGCGGGAAAGATATTGTCCTGCGAAGCCCGGATGCCGCTGCTAAACCGGGTCATCAGGTGAAATAATCCTCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGAtt < 2:491169/143‑1 (MQ=255) ccTGGCGGGAAAGATATTTTCCTGCTAAGCCCGGATGCCGGTGCTAAACCGGGTCATCAGGTGAAATAATCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGtc < 1:548843/143‑1 (MQ=255) ggggAAAGATATTTTCCTGCTAAGCCCGGATGCCGGTGCTAAACCGGGTCATCAGGTGAAATAATCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGtctctct < 2:390617/142‑1 (MQ=255) gggAGAGATGTTTTCCTGCTAAGCCGGGATGCCGGTGCTAAACCGGGTCATCAGGTTAAATGACCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATCTCTTCCTATAGTTGTTTTCTTGCGATTTTGtctctctc < 2:729927/143‑1 (MQ=255) tatTTTCCTGCTAAGCCCGGATGCCGGTGCTAAACCGGGTCATCAGGTGAAATAATCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTACAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGc > 2:106558/1‑143 (MQ=255) tttCCTGCTAAGCCCGGATGCCGGTGCTAAACCGGGTCATCAGGTGAAATAATCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCGTGCGATTCTGTATCTCTCTAACCCGCATa > 2:327466/1‑143 (MQ=255) ttCCTGCTAAGCCCGGATGCCGGTGCTAAACCGGGTCATCAGGTGAAATAATCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATACATTCCTAAAGTTGTTTTCTTACGATTTTGTCTCTCACTAATCCCCATaa > 2:44068/1‑143 (MQ=255) tGCTAAGCCCGGATGCCGGTGCTAAACCGGGTCATCAGGTGAAATAATCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCACAAATAc > 2:302114/1‑143 (MQ=255) cTAGGCCCGGATGCCGGTGCTAAACCGGGTCATCAGGTGAAATATTCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTCTCAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAATACTg < 2:327444/143‑1 (MQ=255) aaGCCCGGATGCCGGTGCTAAACCGGGTCATCAGGTGAAATAATCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAATACTGGt > 2:159641/1‑143 (MQ=255) aGCCCGGATGCCGGTGCTAAACCGGGTAATCAGGTGAAATAATCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAATACTGGTa < 1:608565/143‑1 (MQ=255) cgaaTGCCGGTGCTAAACCGGGACATAAGGTGAAATAATCCCCCTTCAAGGCGCTGCATCGACAGCGACTATTCTTTATAAATAACTAAAGATGTTGTCTTGCGATTATGTCTCTCTATAACCAGCATAAATACAGGTAGCAt > 2:457294/4‑143 (MQ=255) cGGATGCCGGTGCTAAACCGGGTCATCAGGTGAAATAATCCCCATTCAAGACGCTGCATCGACAGCGCCTTTTCTTTATACATTCCTAAAGTTGTTTTCTTCCGATTTGGTCTCTCTCTGACCCGCATAAATACTGATATCAt > 2:458568/1‑143 (MQ=255) cGGATGCCGGTGCTAAACCGGGTAATCAGGTGAAATAATCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATACATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAATACTGGTAGCAt < 2:367482/143‑1 (MQ=255) ggTGCTAAACCGGGTCATCAGGTGAAATAATCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTCTAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAATACTGGTAGCGTCTGCAtgc > 1:309898/1‑141 (MQ=255) ggTGCTAAACCGGGTCATCAGGTGAAATAATCCACCTTCAAGGCGCTGCAACGACAGCGCCTTTTCTTTATAAATTCCTCAAGTTGTTTTCTTTCGATTTTGTCTCTCTCTATCCCGCATAAATACTGGTAGCATCTGCATTc > 1:290869/1‑143 (MQ=255) cTAAACCTGGTTATCAGGTGAAATAGTCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAATACTGGTAGCATCTGCATTCAACt < 2:209530/143‑1 (MQ=255) cTAAACCGGGTCATCAGGTGAAATAAGCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAATACTGGTAGCATCTGCATTCAACt < 1:621804/143‑1 (MQ=255) cTAAACCAGTTCATCAGGTGAAATAATCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAATACTGGTAGCATCTGCATTCAACt < 1:465179/143‑1 (MQ=255) tAAACCGTTGCATCAGGTGAAATAATCCCCCTTCAACGCGCTGCATCGACAGCGCCTTCTCTTTATAGCTCTCTAGAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAATACTGGTAGCATCTGCATTCAAccg < 2:94987/143‑3 (MQ=255) tAAACCGGGTCATCAGGTGAAATAATCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAATACTGGTAGCATCTGCATTCAACTg < 1:725155/143‑1 (MQ=255) tAAACCGGGTCATCAGGTGAAATAATCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAATACTGGTAGCATCTGCATTCAACTg < 1:292921/143‑1 (MQ=255) tAAACCGGGTCATCAGGTGAAATAATCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCAGCATGCATACCTTTAGCATTTGTATTCAACTg > 1:652450/1‑143 (MQ=255) aaaCCGGGTCATCAGGTGAAATAATCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAATACTGGTAGCATCTGCATTCAACTgg > 1:153173/1‑143 (MQ=255) ggTCATCAGGTGAAATAATCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAATACTGGTAGCATCTGCATTCACCTGCATaaca > 2:604461/1‑141 (MQ=255) gTCATCAGGTGAAATAATCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAATACTGGTACCATCTCCATTCAACTGCATAAAAt > 2:712870/1‑143 (MQ=255) tcaGGTGAAATAATCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAATACTGGTAGCATCTGCATTCAACTGGATAAAATTACa < 2:447188/143‑1 (MQ=255) caGGTGAAATAACCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAATACTGGTAGCATCTGCATTCAACTGGATAAAATTACAg < 1:192217/143‑1 (MQ=255) gTGAAATTATCCCCCTTCAAGGCGCTTCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCCTGCTATGTTGTCTCTCACTAACCCGCATAAATACTGGTAGCATCTGCATTCAACTGGATAAAATTACAGGGa < 2:749912/143‑1 (MQ=255) aaaTAATCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAATCCTGGTAGCATCTGCATTCAACTGGATAAACTTACAGGGATGc > 2:758585/1‑143 (MQ=255) aatCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAATACTGGTAGCATCTGCATTCAACTGGATAAAATTACAGGGATGCAGaa < 1:159641/143‑1 (MQ=255) tCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAATACTGGTAGCATCTGCATTCAACTGGATAAAATTACAGGGATGCAGAATg > 1:628906/1‑143 (MQ=255) cccccTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCAGCATAAATACTGGTAGCATCTGCATTCACCTGGATACAATTACAGGGATGCAGAATga > 2:723206/1‑143 (MQ=255) cccTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAATACTGGTAGCATCTGCATTCAACTGGATAAAATTACAGGGATGCAGAATgaga < 2:290869/143‑1 (MQ=255) cTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAATACTGGTAGCATCTGCATTCAACTGGATAAAATTACAGGGATGCAGAATGAGaca < 2:437735/143‑1 (MQ=255) cAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAATACTGGTAGCATCTGCATTCAACTGGATAAAATTACAGGGATGCAGAATGAGACACtt < 1:541126/143‑1 (MQ=255) gcgctgtcgatgcAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAATACTGGTAGCATCTGCATTCAACTGGATAAAATTACAGGGATGCAGAATGAGACACTTtatc > 1:512510/13‑143 (MQ=255) gcgcTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAATACTGGTAGCATCTGCATCCAACTGGATAAAATTACAGGGATGCAGAATGAGACACTTtatc > 2:13376/1‑143 (MQ=255) aCAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAATACTGGTAGCATCTGCATTCAACTGGATAAAATTACAGGGATGCAGAATGAGACACTTTATCTATCAGGACGa > 2:160743/1‑143 (MQ=255) cgcCTTTTTTTCATAAATCCCTAAGGTTGTTTTCTTGCGATTTTGTATCTCTCTACCCCGCATACATTCTGGTTGCTTCTGCATTCAATTGGATAAATTTACAGGGATGCAGAATGAGACACTTTATCTATCAGGACGaaaaa < 2:51230/143‑1 (MQ=255) cgcCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAATACTGGTAGCATCTGCATTCAACTGGATAAAATTACAGGGATGCAGAATGAGACACTTTATCTATCAGGACGaaaaa > 2:296019/1‑143 (MQ=255) gcCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAATACTGGTAGCATCTGCATTCAACTGGATAAAATTACAGGGCTGCAGAATGAGACACTTTTTCTCTCAGGTCGacatat > 1:56861/1‑138 (MQ=255) ccTTGTCTTTACAAATTCCTCAAGTTGTTTTCTTGCTATTTTGCCTCTCTCTAACCCGCATATATACTGGTAGCATCTGCATTCAACTGGATAAAATTACAGGAATGCAGAATGAGACACTTTATCTATCAGGACGAAAAATc < 2:89121/143‑1 (MQ=255) ttttCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAATACTGGTAGCCTCTCCATTCAACTGGATAAAATTACAGGGCTGCAGGAAGAGACCCTTTATCTATCACGACTAAAAAacac > 2:235225/1‑143 (MQ=255) | TCGGTATCTCTGAAGGCATGGTGATGGCTGCCGGTCCTGGCGGGAAAGATATTTTCCTGCTAAGCCCGGATGCCGGTGCTAAACCGGGTCATCAGGTGAAATAATCCCCCTTCAAGGCGCTGCATCGACAGCGCCTTTTCTTTATAAATTCCTAAAGTTGTTTTCTTGCGATTTTGTCTCTCTCTAACCCGCATAAATACTGGTAGCATCTGCATTCAACTGGATAAAATTACAGGGATGCAGAATGAGACACTTTATCTATCAGGACGAAAAATCAC > NC_000913/2196228‑2196505 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |