| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3915504 = | 54 (0.950) | 6 (0.110) | 5/266 | 6.2 | 10.1% | intergenic (‑305/+48) | glmU/atpC | fused N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase/F1 sector of membrane‑bound ATP synthase, epsilon subunit |
| ? | NC_000913 | 3915534 = | 56 (1.050) | intergenic (‑335/+18) | glmU/atpC | fused N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase/F1 sector of membrane‑bound ATP synthase, epsilon subunit | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCTACGTCGCCGTGAG > NC_000913/3915364‑3915646 | aaTTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCaaaaaaa < 2:475894/143‑1 (MQ=255) tAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAagc < 2:914014/143‑1 (MQ=255) cTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGGTTc > 2:235701/1‑143 (MQ=255) ttAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTcc < 2:765458/143‑1 (MQ=255) ttAATTTAAGCGTCACGTGGATGTTTTTGCTCTTATTTCGATCAATGACTAAACAGGAATACAGGGCGGTTTTATATCAGCAGGCTCTATGTGAACGCTATTCAGGACGCTTCCCACGCGCAAAGCAGACCCAGCCTGTTTcc > 1:682364/1‑143 (MQ=255) ccAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCtttt < 2:248365/142‑1 (MQ=255) cAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTtg < 2:326919/143‑1 (MQ=255) gTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGc > 2:950045/1‑143 (MQ=255) gATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAACAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCttt > 2:592524/1‑143 (MQ=255) gATGTTTTTGCTCTTATGTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCttt < 2:184013/143‑1 (MQ=255) tGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTc > 2:305882/1‑143 (MQ=255) tGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTc > 2:535552/1‑143 (MQ=255) ttggcttgtATTTCGATCAGTGAAGAAACAGGGAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATCCAGGACGGGACACAAGAAAAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGc < 2:956206/135‑1 (MQ=255) gCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTCTCCAGACTGGCTTTTGTGCTTTTCAAGCCgg < 2:964230/143‑1 (MQ=255) tcgttATTTCGAGCAAGGAATAAACAGGAAAACATGAGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGTGACACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGgt < 1:357573/140‑1 (MQ=255) tctTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGgtg > 2:249961/1‑143 (MQ=255) tctTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACCGGCTTCTTTTTTTTTCAAGCCAgtg > 2:930478/1‑143 (MQ=255) tctTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAAAGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCGATTGCACTGTTCAAGCCAgtg > 1:654501/1‑143 (MQ=255) ttATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGtt < 2:911624/143‑1 (MQ=255) tCGATCAATGAATAAAAAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATc < 2:931225/143‑1 (MQ=255) tCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCtt > 2:803180/1‑143 (MQ=255) aaTGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGAGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCCGACTGGCTTTTGTGCTTTTCAGGCCGGTGTCACATCGCtttt > 2:119128/1‑143 (MQ=255) aTGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACGCGCGCAAGAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCGTTTCCAGCCGGTGTTACCTCGcttctt > 1:747045/1‑143 (MQ=255) aTGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCttttt > 2:556994/1‑143 (MQ=255) gAATAAACAGGAAAACAGGTGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTg < 2:610560/143‑1 (MQ=255) aataagtacgAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCACCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTgg < 1:440469/134‑1 (MQ=255) aaCAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGGATGGTTGCGGAGCGTGTCAAGCCGGGGTTACATCGCTTTTTTGGTcca > 2:221937/1‑141 (MQ=255) aaCAGGAAAACAGGGGGGGTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGACTTGTGAACTTATCAAGCCGGAGTTACATCGCTTGTTTGGTGaa > 1:856000/1‑143 (MQ=255) ggAAAATAGAGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCg < 1:337396/143‑1 (MQ=255) aagaGGGGTGTTGTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATaa < 2:160849/140‑1 (MQ=255) aaCAGGGGGTTTTTAGATGAGCAGGCTCTATGTGAACGCTATTCAGGACGGTTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATaa < 1:166586/143‑1 (MQ=255) aGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGGGTTACACCGCTTTTTTGGTCAACTCGATCAcgc > 2:104347/1‑143 (MQ=255) aGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTCTTGTGATTTTCAAGCCGGTGTTGCATCGCTTTTGTGGGCCACTGGGTCAcgc > 2:203335/1‑143 (MQ=255) gggTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACTCGCAg > 2:612722/1‑143 (MQ=255) ttttATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTg > 1:842743/1‑143 (MQ=255) tttATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGCTCACACGCGCAAAAAAAAGCCAGCCTGTTCCCACACTGGCTTTCGCGCTTCTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGCTAACGCGCAGCTgc < 2:525562/143‑1 (MQ=255) agcagGGTCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCTCGATCGc > 1:152946/1‑143 (MQ=255) cagTATCTATGTGAACGATATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCtt < 2:384163/143‑1 (MQ=255) cagGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGGGTTACATCGCCTTTTTTGGCCACTCGATAACGCGCAGCCGCGCCATCGcct > 1:59596/1‑141 (MQ=255) atgATCTATGTGACCGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCttt < 1:289485/141‑1 (MQ=255) tATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTTCGCGATCGCTTTGGCCAg > 2:967377/1‑143 (MQ=255) tgtgAACGCTATTCAGGATGTGTTACACGGGTAAAAAAAAGCCAGCCTGTTTACAGACTGGCGTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGtt < 2:498190/143‑1 (MQ=255) ccGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATCACGAGCAGCTGCTCGATCGCTTTGGCCAGTTCCGCa < 2:732605/142‑1 (MQ=255) gcgggACGGGGCGCACGCGGAAAAAAAAGCCAGGCTGTTTCCAGACGGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCt < 2:682364/140‑1 (MQ=255) taCGGGTCACATGCGCAAAGAAAAGCCAGCCTGTTTCCAGACTGGTTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGc < 1:307314/142‑1 (MQ=255) gACGGGTCACACGCGCAAGAAAAAGCCAGCCGGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGAGCGCTGTGGCCAGTTCCGCCGGCGCCTGGGc > 1:603678/1‑143 (MQ=255) gtgTCACGCGCGCAAATAGAGGCCGGCGTGTTGCTAGACTCGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGGTTTTTTGGTCAACTCGATACCGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTa < 1:71201/141‑1 (MQ=255) ggTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTaa < 1:556994/143‑1 (MQ=255) ctCACACGCGCATAATGGAGCCAGCCTGTTTCCAGACTGGCTGTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCACCTCGAGATCGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAAt < 1:5738/142‑1 (MQ=255) gcgcgggcAAAAAAAAGACAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTGTGGTCAACTCGATAACGCGTGTTTTCTGGATCACTATGGCCAGTTCCGCAGACGCCTGAGCGTAATCTa < 1:212340/137‑1 (MQ=255) gcgcAAAAAAAAGCCAGCCTGTTTCCAGCCTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACCCGCAGCTGCGCGATCGCTTTGTCGAGGTCCGCAGACGCCCGAGCCTAGTCTACgcc > 2:934890/1‑141 (MQ=255) gcgcAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGCGCGTACTCTACggc > 2:441940/1‑141 (MQ=255) aacaaaaGCCGGCCTGCTGACGGACCGGCGTGTGGGCGTGTCAAGCCGGTGTGACATCGCTTTTTTGGTCAACTCGATCACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCTACGTCGCCgc < 2:926906/140‑2 (MQ=255) aaaaaaaGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCTACGTCGCCGt > 2:603955/1‑143 (MQ=255) aaaaaGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCTACGTCGCCGTga < 2:693539/143‑1 (MQ=255) aaaaGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCTACGTCGCCGTgag > 1:42355/1‑143 (MQ=255) aaaaGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGGGTTACATCGCTTTTTTGGTCAAATCGATAACGCGCAGCTGCGCGATCGCTTTGGCCGGTTCCGCAGACGCCCGAGCGTGATCTACGTCGCCggcgg > 2:401367/1‑139 (MQ=255) | AATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCTACGTCGCCGTGAG > NC_000913/3915364‑3915646 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |