Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
MC JC | NC_000913 | 762,329 | Δ19 bp | coding (808‑826/1218 nt) | sucB → | dihydrolipoyltranssuccinase |
Missing coverage evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | start | end | size | ←reads | reads→ | gene | description | |||
* | * | ÷ | NC_000913 | 762329 | 762347 | 19 | 41 [0] | [0] 40 | sucB | dihydrolipoyltranssuccinase |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 762328 | 0 (0.000) | 40 (1.040) | 32/282 | 0.2 | 100% | coding (807/1218 nt) | sucB | dihydrolipoyltranssuccinase |
? | NC_000913 | 762348 = | 0 (0.000) | coding (827/1218 nt) | sucB | dihydrolipoyltranssuccinase |
AAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATGACGTGGTTTACCACAACTATTTCGACGTCAGCATGGCGGTTTCTACGCCGCGCGGCCTGGTGACGCCGGTTCTGCGTGATGTCGATACCCTCGGCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTG > NC_000913/762186‑762461 | aaGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAACCGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATGACGTGGTTTACCACAACTATTTCGACGTC < 2:535366‑M1/143‑1 (MQ=255) attgtttGAAAAACGCCAGGGGATCCGGCTGGGATTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCGGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATGACGTGGTTTACCACAACTATTTCGACGTCc < 2:610861‑M1/140‑2 (MQ=255) gCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATGACGTGGTTTACCACAACTATTTCGACGTCcg > 2:63764‑M1/1‑141 (MQ=255) gCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATGACGTGGTTTACCACAACTATTTCGACGTCcg > 2:299813‑M1/1‑141 (MQ=255) tttGAAAAACGCCACGGAATATGTCTGGGCTTTATGTCCTTATACGTGAAAGGTGGGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATGACGTGGTTTACCACAACTATTTCGACGTCcgcgc > 2:671997‑M1/1‑138 (MQ=255) aaaaCGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTATGTGAAAGCGGTGGTTGAAGCCCTGATACGTTTCCCGGAAGTGAACGCTTCTATCGACGGCGATGACGTGGTTTAACACAACTATTTCGACGTCcgcgcggcct > 2:329289‑M1/1‑133 (MQ=255) aaaCGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTCCGTGACAGCGGTGGTTGAAGTCATGAAACGTTCACCGGAAGTGAACGCTTCGATCGACGGCGATGACGTGGTTTACCACAACCATCTCGACGTCcgcgccggccg > 1:146417‑M1/1‑132 (MQ=255) aaaCGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATGACGTGGTTTACCACAACTATTTCGACGTCcgcgcggcctg > 2:580889‑M1/1‑132 (MQ=255) aaaCGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATGACGTGGTTTACCACAACTATTTCGACGTCcgcgcggcctg > 2:518996‑M1/1‑132 (MQ=255) gCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATGACGTGGTTTACCACAACTATTTCGACGTCcgcgcggcctggtga < 2:38827‑M1/143‑16 (MQ=255) ccgcggcctgcgcttggcctttatggcctTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATGACGTTGTTTACCACAACTATTTCGACGTCcgcgcggcctggtgac < 1:285319‑M1/129‑17 (MQ=255) ccACGCCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATGACGTGGTTTACCACAACTATTTCGACGTCcgcgcggcctggtggc > 1:506786‑M1/1‑127 (MQ=255) cACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATGACGTGGTTTACCACAACTATTTCGACGTCcgggcggcctggtgacg > 2:88041‑M1/1‑126 (MQ=255) ggCATCCGTCTGGGCCTTATGTCCTTATACGTTAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATGACGTGGTTTACCACAACTATTTCGACGTCcgcgcggcctggtgacgccg < 2:633823‑M1/143‑21 (MQ=255) ggCACCCGTCTGGGCGTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATGACGTGGTTTACCACAACTATTTCGACGTCcgcgcggcctggtgacgccg < 2:605215‑M1/143‑21 (MQ=255) gCATCCGTCTGGGCTTTATGTCCTGCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATGACGTGGTTTACCACAACTATTTCGACGTCcgcgcggcctggtgacgccgg < 2:129011‑M1/143‑22 (MQ=255) tGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCGATCGCCGGCGATGACGTGGTTTACCACAACCATTTCGACGTCcgcgcgccctggtgacgcgggcactacggt > 1:315748‑M1/1‑113 (MQ=255) cTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATGACGTGGTTTACCACAACTATTTCGACGTCcgcgcggcctggtgacgccggttctgcgtgatgt > 1:20227‑M1/1‑109 (MQ=255) cTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATGACGTGGTTTACCACAACTATTTCGACGTCcgcgcggcctggtgacgccggttctgcgtgatgt < 1:220709‑M1/143‑35 (MQ=255) aTGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATGACGTGGTTTACCACAACTATTTCGACGTCcgcgcggcctggtgacgccggttctgcgtgatgtcgat < 2:346551‑M1/143‑39 (MQ=255) gAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATGACGTGGTTTACCACAACTATTTCGACGTCcgcgcggcctggtgacgccggttctgcgtgatgtcgataccctcggcatggc < 2:383284‑M1/143‑53 (MQ=255) aGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATGACGTGGTTTACCACAACTATTTCGACGTCcgcgcggcctggtgacgccggttctgcgtgatgtcgataccctcggcatggcaga < 2:110167‑M1/143‑56 (MQ=255) aGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATGACGTGGTTTACCACAACTATTTCGACGTCcgcgcggcctggtgacgccggttctgcgtgatgtcgataccctcggcatggcaga < 2:594801‑M1/143‑56 (MQ=255) ttgttgAAGCCCTGAAGCGTTACCCGGAAGTGACCGCTTTTATCGATGGCTATCACGTGGTTTACCACAACTATTTCGACGTCcgcgcggcctggtgacgccggttctgcgtgatgtcgataccctcggcatggcagacatcg < 1:619596‑M1/141‑61 (MQ=255) tggtTGAAGCCCTGAAACGTTACCCGGAAGTGCACGCTTCTATCGACGGCGATGACGTGGTTTACCACAACTATTTCGACGTCcgcgcggcctggtgacgccggttctgcgtgatgtcgataccctcggcatggcagacatcg < 2:654343‑M1/143‑61 (MQ=255) gggttGAAGCCCTGACACGTTACCCGGAAGTGAACGCTTCTGTCGACGGCGATGACGTGGTTTACCACAACTATTTCGACGTCcgcgcggcctggtgacgccggttctgcgtgatgtcgataccctcggcatggcagacatcg < 1:287879‑M1/142‑61 (MQ=255) gtTGAACCCCTGAAACGTCACCCCGAAGTGAACGCTTCTATCGACGGCGACGACGTGGTTTACCACAACTATTTCGACGTCcgcgcggcctggtgacgccggttctgcgtgatgtcgataccctcggcatggcagacatcgag < 2:504140‑M1/143‑63 (MQ=255) ttGAAGCCCTGAAACGTTACCCGCAAGTGAACGCTTCTATCGACGGCGATGACGTGGTTTACCACAACTATTTCGACGTCcgcgcggcctggtgacgccggttctgcgtgatgtcgataccctcggcatggcagacatcgaga < 2:499392‑M1/143‑64 (MQ=255) aGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATGACGTGGTTTACCACAACTATTTCGACGTCcgcgcggcctggtgacgccggttctgcgtgatgtcgataccctcggcatggcagacatcgagaagaa < 1:149043‑M1/143‑68 (MQ=255) tGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATGACGTGGTTTACCACAACTATTTCGACGTCcgcgcggcctggtgacgccggttctgcgtgatgtcgataccctcggcatggcagacatcgagaagaaaatca > 2:426519‑M1/1‑71 (MQ=255) gAAGCGTTACCCGGAAGTTAACGCTTCTATCGACGGCGATGACGTGGTTTACCACAACTATTTCGACGTCcgcgctgcctggtgacgccggttctgcgtgatgtcgataccctcggcatggcagacatcgagaagaaaatcaa < 1:192118‑M1/143‑74 (MQ=255) aaaggtgagccggaagtgagCGCCTCTATCGGCGGCGATGACGTGGGTTACCACAACGATTGCGACGTCcgcgcggcctggtgacgccggtgcggcgtgatgtcgataccctcggcatggcagacatcgagaagaaaatcaaa < 1:468598‑M1/134‑75 (MQ=255) aaGGGAACGGCTCTATCGACGGCGATGGCGTGGTTTACCACAACTATTGCGACGTCcgcgcggcctggtgacgccggttctgcgtgatgtcgataccctcggcatggcagacatcgagaagaaaatcaaagagctggcagtca < 1:518996‑M1/143‑88 (MQ=255) gTGAACTCTTCTATCGATGGCTATGACGTATTTTACCACAACTATTACGACGTCcgcaaggcctggagacgccgatcctgcgtgatgtcgataccctcgccatggcagacatcgagaagaaaatcaaagagctggcagtcaaa < 2:329280‑M1/143‑90 (MQ=255) aaCGCTTCTATCGACGGCGATGACGTGGTTTACCACACCTATTTCGACGTCcgcgcggcctggtgacgccggttctgcgtgatgtcgataccctcggcatggcagacatcgcgaagaaaaccaacgcgccggcagtcacaggc > 1:91199‑M1/1‑51 (MQ=255) tttttcgacTGCGATGACGTGGTTTACCACAACTATTTCGACGTCcgcgcggcctggtgacgccggttctgcgtgatgtcgataccctcggcatggcagacatcgagaagaaaatcaaagagctggcagtcaaaggccgtgac < 2:157851‑M1/139‑99 (MQ=255) cTATCTTCGGCTATGACTTTGTTTATCACAACTATTTCGACATCcgcgcggcctggtgacgccggttctgcgtgatgtcgataccctcggcatggcagacatcgagaagaaaatcaaagagctggcagtcaaaggccgtgacg < 2:111121‑M1/143‑100 (MQ=255) tCGACGGCGATGACGTGGTTTACCACAACTATTTCGACGTCcgcgcggcctggtgacgccggttctgcgtgatgtcgataccctcggcatggcagacatcgagaagaaaatcaaagagctggcagtcaaaggccgtgacggca > 2:372261‑M1/1‑41 (MQ=255) aCGGCGATGACGTGGTTTACCACAACTATTTCGACGTCcgcgcggcctggtgacgccggttctgcgtgatgtcgataccctcggcatggcagacatcgagaagaaaatcaaagagctggcagtcaaaggccgtgacggcaagc > 2:555949‑M1/1‑38 (MQ=255) aCTAATTCGACGTCcgagcagccggagaacgcaggttctgcgtgatgtcgatgccctcgggatggcagatatggagaagaaaagcaaagagctggaagtcaaaggccgtgacggcaagctgaccgttgaagatctgaccggtg < 2:126317‑M1/143‑130 (MQ=255) tttCGACGTCcgcgcggcctggtgacgccggttctgcgtgatgtcgataccctcggcatggcagacatcgagaagaaaatcaaagagctggcagtcaaaggccgtgacggcaagctgaccgttgaagatctgaccggtggtga > 2:544515‑M1/1‑10 (MQ=255) | AAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATGACGTGGTTTACCACAACTATTTCGACGTCAGCATGGCGGTTTCTACGCCGCGCGGCCTGGTGACGCCGGTTCTGCGTGATGTCGATACCCTCGGCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTG > NC_000913/762186‑762461 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |