Predicted mutation
evidence seq id position mutation annotation gene description
JC NC_000913 4,001,644 Δ5 bp coding (220‑224/951 nt) corA → magnesium/nickel/cobalt transporter

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 40016431 (0.030)32 (0.830) 26/284 0.4 97.0% coding (219/951 nt) corA magnesium/nickel/cobalt transporter
?NC_000913 4001649 = 1 (0.030)coding (225/951 nt) corA magnesium/nickel/cobalt transporter

TCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAG  >  NC_000913/4001514‑4001790
                                                                                                                                       |                                                                                                                                             
attgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgcagacgacgacggcctccatCTCcttct                                                                                                                                        >  2:142262‑M2/136‑143 (MQ=255)
     tcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggacctggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcccgcatCtccttcttctcc                                                                                                                                   >  1:394009‑M2/131‑141 (MQ=255)
       ttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacggcggcggaccgcatCTCcttctccttctt                                                                                                                                 >  1:387452‑M2/129‑143 (MQ=255)
       ttgtcaaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagtcatcgaagcatcggcacgtttctttgaagacgacgaccgcctgcatCtccctcctcttcct                                                                                                                                 >  1:560040‑M2/129‑141 (MQ=255)
         gtcgatcctgacgacgacgagcgactgcgcggacaagctgaacgtggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTg                                                                                                                               <  2:168513‑M2/17‑1 (MQ=255)
           cggaccggacgacgacgagcgactgcgcgtcgaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGaa                                                                                                                             <  2:413605‑M2/19‑1 (MQ=255)
           cgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGaa                                                                                                                             <  2:266309‑M2/19‑1 (MQ=255)
                      accgctagggacggcgcgtgcaaggtgaacgtgggcagaggctggcaacccgcccggaactggaagacagcgaagcatcggcacgtttctttgaagacgacgacggcgtgcatCTCCTTCTGCTTCTTTGAAGATGCGGAAGa                                                                                                                  <  1:464390‑M2/30‑1 (MQ=255)
                           gagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTCCTTCTTCTCTACAGCTACGGAAGAGCaca                                                                                                             >  1:215079‑M2/109‑142 (MQ=255)
                             gcgacggcgcgtagaatctgaacttggcaagagcctggcaacccgcccggaactggaagacagcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGcc                                                                                                           <  2:429964‑M2/37‑1 (MQ=255)
                                  cgcccgtagactccgagcttggccggagcctggccacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTaa                                                                                                      <  1:578820‑M2/42‑1 (MQ=255)
                                    cgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGCTGCGGAAGATCACGCCGGTAACt                                                                                                    >  2:622957‑M2/100‑143 (MQ=255)
                                            atctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACtgtg                                                                                            <  1:239298‑M2/52‑1 (MQ=255)
                                            atctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACtgtg                                                                                            <  1:238137‑M2/52‑1 (MQ=255)
                                                              cctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGAt                                                                          >  2:432714‑M2/74‑143 (MQ=255)
                                                              cctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGAt                                                                          >  2:655040‑M2/74‑143 (MQ=255)
                                                                tggcaacccgcccggaactggaagacattgaagcatcggtacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCGTTTACCATCCGTCATgg                                                                        >  2:197509‑M2/72‑143 (MQ=255)
                                                                tggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATgg                                                                        <  2:187584‑M2/72‑1 (MQ=255)
                                                                  gcaatccgcccggaactggaagacatcgaagcatcggcaggtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTGTTTGAAGATGCGAAAGTGCACGCCGGTATCTCCACTGTGGCATTTACCATCCGTGATGgtc                                                                      <  1:22066‑M2/74‑1 (MQ=255)
                                                                        ggAACTGGAAGACATCGACGCATCGGCACTTTTCTTTGAAGCC‑‑C‑‑CTGCCTTGCGACACCTCCTTCTTGGGCGAGGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTAct                                                           <  1:297632/143‑1 (MQ=255)
                                                                           ccggaactggaagacatcgaagcatcggcacgtttcttcgaagacgacgccggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTa                                                             <  2:489502‑M2/83‑1 (MQ=255)
                                                                             ggaacgggaagacagcgaagcatcggaacgtttctgggaagacgacgacggcctgcagCTCCTTCTTCTTCTTTTAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTAct                                                           <  2:8618‑M2/85‑1 (MQ=255)
                                                                                  tggaagacatcgaagctgcggttcgtttgttggaaggcgacgacggcctgcatCTCCGTCTGCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcg                                                      <  2:1242‑M2/90‑1 (MQ=255)
                                                                                  tggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcg                                                      <  2:653295‑M2/90‑1 (MQ=255)
                                                                                   ggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgt                                                     <  1:451344‑M2/91‑1 (MQ=255)
                                                                                       gacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTGACTCCACTGTGGCATTTATCATCCGTGATGGTCGTCTGTTTACTCTgagtgagc                                                 >  2:608054‑M2/49‑143 (MQ=255)
                                                                                        acatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGACGATCACGCCGGTAACTCCACTGTGGCATTTACCTTCCGTGATGGTCGTCTGTTTACTCtgcctgagcc                                                >  2:107106‑M2/48‑142 (MQ=255)
                                                                                          atcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtgagcgtg                                              >  2:45374‑M2/46‑143 (MQ=255)
                                                                                          atcgaagcatcggcacgtttctttgaagacgacgacggcctgcatATCCTACTTATTATTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgggagcgtg                                              >  2:37876‑M2/46‑143 (MQ=255)
                                                                                                     ggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCt                                   <  2:365331‑M2/109‑1 (MQ=255)
                                                                                                                ttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTa                        >  2:80818‑M2/24‑143 (MQ=255)
                                                                                                                        gacgccggcctggagCTCCTGCTTCTTCATTGAGGATGCGGAAGCTCACGCCGGTGACGGCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGc                <  1:39919‑M2/128‑1 (MQ=255)
                                                                                                                                      tCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCGAg  >  2:379793‑M2/2‑143 (MQ=255)
                                                                                                                                       |                                                                                                                                             
TCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAG  >  NC_000913/4001514‑4001790

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.