New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3423374 =73 (0.970)11 (0.150) 5/278 10.6 14.0% intergenic (+182/+47) yhdZ/rrfF putative amino acid ABC transporter ATPase/5S ribosomal RNA of rrnD operon
?NC_000913 3423663 = 63 (0.850)intergenic (‑10/+3) thrV/rrfD tRNA‑Thr/5S ribosomal RNA of rrnD operon
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGG  >  NC_000913/3423232‑3423511
                                                                                                                                              |                                                                                                                                         
gctGGCCTTTCGCTTGATTCGACGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGa                                                                                                                                           <  1:507142/141‑1 (MQ=255)
gATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGa                                                                                                                                           >  1:1055729/1‑143 (MQ=255)
     ccTTTCTCTGGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTGGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATaaaa                                                                                                                                      <  2:1045146/143‑1 (MQ=255)
     ccTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATaaaa                                                                                                                                      <  1:273366/143‑1 (MQ=255)
         gcGCTTGGTTTGAGCTCCGGCAGTTTATGGCGGGCGTCCTGCCCGCCGCCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACaaa                                                                                                                                  <  2:1272712/142‑1 (MQ=14)
             ttgatttgatGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTGGAAACTTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGCTAAAACAAAAGGc                                                                                                                              >  1:1181901/1‑143 (MQ=255)
                      tGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTc                                                                                                                     <  1:791909/143‑1 (MQ=255)
                         cTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGCTTTGTCCTACTCGGGAGAGTGTTCACCGACCAACAACAGATCACACAAAAGGCCCCGCCTTccca                                                                                                                  >  2:1227296/1‑141 (MQ=11)
                          tGGCAGTTTATGGCGGGCGTCCTGCACGCCACGCTCCGGGACGGTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTGGTGCTACTCGGGCACGTGTTCACCGACAACCAACAGATAAAACAAAAGGCCCAGCATTCCTAc                                                                                                                 >  2:223006/1‑143 (MQ=11)
                            gCAGTTTATGGCGGGCGTCCTGGCGGTGACGCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGCTTTGTCCTACTCGGGAGAGTGTTCACCGACAACCAACCGATAAAACAAAAGGCCCAGTCTTCCGACTg                                                                                                               >  2:470925/1‑143 (MQ=11)
                            gCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGGGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGAccg                                                                                                               >  1:833376/1‑141 (MQ=25)
                             cAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGa                                                                                                              <  1:1155051/143‑1 (MQ=38)
                               gTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGGGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGGGc                                                                                                            >  1:1186732/1‑143 (MQ=21)
                                tttATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACACCAGCTAAAACAAAAGGCCCAGGCTTCCGACTGCGcc                                                                                                           >  2:458048/1‑143 (MQ=255)
                                 ttATGGTGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGAGTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCt                                                                                                          <  1:965781/143‑1 (MQ=255)
                                 ttATGGCGGGCGTCCTGCCCGCCACCCGCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCt                                                                                                          <  1:43917/143‑1 (MQ=38)
                                 tgacggcgggcgTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCt                                                                                                          <  1:583663/139‑1 (MQ=255)
                                      gcgggcgTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGCGTGTTCACCGACAAACACCAGATAAAGCAAAAGGCCCAGTCCTCCGACTGAGCCTCTTgc                                                                                                     >  2:456533/1‑142 (MQ=11)
                                      gcgggcgTCCTGCCCGCCACCCTCCGGGCCGTTGCGTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGt                                                                                                     <  2:680801/143‑1 (MQ=255)
                                           cgcccTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTAt                                                                                                <  1:579038/140‑1 (MQ=255)
                                            gtgttGCCCGCCGCCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTGCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTAtt                                                                                               <  1:346649/139‑1 (MQ=255)
                                            gTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAACACAAAAGGCCCAGTCTTACGACTGAGCCTTTTGgttcagt                                                                                               >  2:1108053/1‑139 (MQ=255)
                                             tCCTGCCCGGCGCCCTCCGGACCGCTGCGCCGCAACGTTCAAACCCGCTCCCGGCGGATTTGTCCTACTCCGGAGAGTGTTCACTGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTAttt                                                                                              <  2:893232/143‑1 (MQ=11)
                                                   ccGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCAAGCATCCCGACTGAGCCTTTTGTTTTATTTGATGTc                                                                                        >  1:891284/1‑143 (MQ=255)
                                                      ccgccgctcGGTCCGGTGCTTCTCAACGTTGAAATCCGCTCCCGGCAGATTTGTCCTACTCGGTAGAGTGTTCACCCACAAACAACAGATAAAACAAAAGGCCCTGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTgg                                                                                     <  2:154194/135‑1 (MQ=255)
                                                      ccACCCTCCGTGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTTCTCTTGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTgg                                                                                     <  1:277169/143‑1 (MQ=255)
                                                      ccACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTgg                                                                                     <  2:635845/143‑1 (MQ=255)
                                                        aCCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCa                                                                                   >  1:450929/1‑143 (MQ=255)
                                                            tCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGGAGTTc                                                                               >  1:1160577/1‑143 (MQ=255)
                                                            tCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTc                                                                               >  1:838336/1‑143 (MQ=255)
                                                               tgaacgttgcgaagCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCt                                                                            >  2:1043001/14‑143 (MQ=255)
                                                                 gCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTAc                                                                          >  1:922139/1‑143 (MQ=255)
                                                                  ccGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGCCAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTATTGTTTTATTTGATGTCTGGCAGTTGCCTAct                                                                         >  1:985789/1‑143 (MQ=255)
                                                                    gTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGCTGTCTGGCAGTTCCCTActct                                                                       >  1:188790/1‑143 (MQ=255)
                                                                     ttGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGttt                                                                                                   <  2:940793/114‑1 (MQ=255)
                                                                     ttGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGttt                                                                                                   >  1:940793/1‑114 (MQ=255)
                                                                     ttGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGGCTGGCAGTTCCCGACtctc                                                                      >  2:864795/1‑143 (MQ=255)
                                                                           cGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATgg                                                                >  1:1001767/1‑143 (MQ=255)
                                                                            gCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATggg                                                               <  1:775915/143‑1 (MQ=255)
                                                                                  ttCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGAcc                                                         >  1:702071/1‑143 (MQ=255)
                                                                                   tCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACCAACAACAGATAAAACACAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGAccc                                                        >  2:249619/1‑143 (MQ=255)
                                                                                     aactCCGATCCAGGTGGATTGGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCca                                                      <  2:1055729/140‑1 (MQ=17)
                                                                                     aaaTCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCATACTCTCGCATGGGGAGACCCca                                                      <  2:374550/143‑1 (MQ=255)
                                                                                      aaTCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCcac                                                     >  2:889510/1‑143 (MQ=255)
                                                                                        tCCGCTCCCGGCGGATTTGTCCTACTCTGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCacac                                                   <  1:987789/143‑1 (MQ=255)
                                                                                          cggtCCCGGCGGATTTGTCCGACTCGGGAGAGTGTTCTCCGACACACAACAGATAAAACAAACGGCCCAGTCTTCCGACTGCGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTa                                                 <  2:1295106/140‑1 (MQ=14)
                                                                                           gCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTAc                                                >  2:1246663/1‑143 (MQ=255)
                                                                                                cggcggATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCg                                           <  1:1031583/143‑1 (MQ=255)
                                                                                                 ggcggATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCgg                                          >  1:916477/1‑143 (MQ=255)
                                                                                                 ggcggATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCgg                                          >  1:75945/1‑143 (MQ=255)
                                                                                                      ggtggTCCTACCCGGGGTCGAGCTCCCCGACACACACCTAATAAAACTACGGGCCCCCTCCTCCGACTCACCCTTTCGCGTGATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACGCTACCATCGGCGCTa                                     <  2:1160577/139‑1 (MQ=0)
                                                                                                       tttGTCCTACGCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTAc                                    <  1:605427/143‑1 (MQ=255)
                                                                                                          gTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGc                                 <  1:1138571/143‑1 (MQ=255)
                                                                                                           tCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCCGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCg                                >  2:394006/1‑143 (MQ=255)
                                                                                                            ccTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGt                               <  2:450929/143‑1 (MQ=255)
                                                                                                              tACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCCGTTCCCTACTCTCGCCTGGGGCGACCCCACCCTACCCTCCGCGCTACCGCGatt                             >  2:780983/1‑143 (MQ=14)
                                                                                                              tACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGttt                             <  1:143777/143‑1 (MQ=255)
                                                                                                                   gggAGAGTGTTCACGGACAAACAACAGATAAAACAAAATGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTTTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACtt                        <  2:1181901/143‑1 (MQ=255)
                                                                                                                   gggAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCCGTTCCCTACTCTCGCCTGGGCAGACCCCCCCCTACCATCGGCGCTCCGGCGtgtgcctt                        >  2:628677/1‑136 (MQ=14)
                                                                                                                      agagTGTTCACCGACAAACAACAGATAAAACAACAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTg                     >  1:219268/1‑143 (MQ=255)
                                                                                                                       gagTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGa                    <  2:630844/143‑1 (MQ=255)
                                                                                                                       gagTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGa                    <  1:1226885/143‑1 (MQ=255)
                                                                                                                            ttCACCGACAAACAACAGATAAGACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCg               <  2:1168000/143‑1 (MQ=255)
                                                                                                                            ttCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACTATCGGCGCTGCGGCGTTTCACTTCTGAGTTCg               >  1:682565/1‑143 (MQ=255)
                                                                                                                                 cGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTGCGGCGTTTCACTTCTGAGTTCGGCATg          >  1:1215914/1‑143 (MQ=255)
                                                                                                                                   accaccgacaGATAAAACAAGAGGCCCAGTCTTGCGACTGAGCCTTTTGTCTTAGTTGATGCGTTGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCACCGGCGCTACGGCGTTTCACTGCTGAGTTCGGCATggg        <  2:791025/136‑1 (MQ=11)
                                                                                                                                     aaacaaCAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGt      >  2:555785/1‑143 (MQ=40)
                                                                                                                                      aacaacAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTc     >  1:762364/1‑143 (MQ=40)
                                                                                                                                       acaacaGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCCCTACGGCGTTTCACTTCTGAGTTCGGCCTGGGGTCa    >  1:4857/1‑143 (MQ=255)
                                                                                                                                        caacaGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGCGTTCGCCAGGGGGTCAg   >  2:251526/1‑143 (MQ=255)
                                                                                                                                         aacaGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAgg  >  1:438539/1‑143 (MQ=255)
                                                                                                                                         aacaGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAgg  >  1:801515/1‑143 (MQ=255)
                                                                                                                                         aacaGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCATCTTGAAGAATATGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCCCACTACCATCGGCGCTACCGCGTTTCCCTTCTGAGTCCgccgcgcggcgggg  >  2:940042/1‑130 (MQ=14)
                                                                                                                                              |                                                                                                                                         
GATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGG  >  NC_000913/3423232‑3423511

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.