New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1293032 =1 (0.010)81 (1.070) 54/282 0.3 98.8% intergenic (‑110/‑495) hns/tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
?NC_000913 = 1979270 NA (NA)intergenic (‑55/‑483) insA/uspC IS1 repressor TnpA/universal stress protein

Only 100 of 138 total aligned reads displayed.

GATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCT  >  NC_000913/1292890‑1293173
                                                                                                                                              |                                                                                                                                             
gcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacct                                                                                                                                               <  1:781396‑M1/1‑1 (MQ=255)
gcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacct                                                                                                                                               <  1:913603‑M1/1‑1 (MQ=255)
    tgatgtccggcggtgcgtttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTtgtg                                                                                                                                           >  2:423038‑M1/139‑143 (MQ=255)
         tccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacttcaaagacaccatcatacactaaatcagtaagttggcagcatcaccTTGTgccgcc                                                                                                                                      <  1:180806‑M1/10‑1 (MQ=255)
          aGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATAATGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTACATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTCCTCTATTTTGTGCCGggt                                                                                                                                     <  2:809878‑M2/143‑4 (MQ=255)
           cggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagcaccagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttcgcagcatcaccTTGTCCCGCcac                                                                                                                                    <  2:866574‑M1/12‑2 (MQ=255)
            aaTTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaa                                                                                                                                   >  1:691011‑M2/1‑138 (MQ=255)
            aaTTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaa                                                                                                                                   >  1:956639‑M2/1‑138 (MQ=255)
                   tgtGCTTCGCGCATTGGAGGAATCTAAAACGTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGGAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactcc                                                                                                                            >  2:582653‑M2/2‑131 (MQ=255)
                    ttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATACCTATCt                                                                                                                           <  1:464719‑M1/21‑1 (MQ=255)
                    ttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATAtcg                                                                                                                           <  1:978085‑M1/21‑2 (MQ=255)
                    ttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCt                                                                                                                           <  1:1001886‑M1/21‑1 (MQ=255)
                    ttttgccgttacgcaccaccccgtcagtagctgaacaggaggcacagctgatacaaacagaacccactggaccacctcaaacaccacatcatacactaaatcagtcacttggcagcatcaccTTGTGCCGCCACCAAATATCt                                                                                                                           <  2:237242‑M1/21‑1 (MQ=255)
                    tgtggccgtgacgcaccacccaggcaggagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaagcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCt                                                                                                                           >  1:751330‑M1/123‑143 (MQ=255)
                        ttCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaagtt                                                                                                                       <  2:1101959‑M2/143‑18 (MQ=255)
                        gccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTc                                                                                                                       >  1:1098553‑M1/119‑143 (MQ=255)
                           gttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcattcactaaatcagtaagttggcagcatcaccTTGTGCAGCCAATAAATCTCTTTtcaca                                                                                                                    <  2:363560‑M1/28‑3 (MQ=255)
                           gttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATATTTTCATa                                                                                                                    <  1:398358‑M1/28‑1 (MQ=255)
                            ggacgcgccgacccgggagtggctgaacaggagcgacaggtgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATaa                                                                                                                   >  2:269951‑M1/115‑143 (MQ=255)
                                  accaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAACTATCTTTTCATAAAATTAg                                                                                                             <  2:132180‑M1/35‑1 (MQ=255)
                                    agtaATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGCGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgtt                                                                                                           >  1:1258320‑M2/1‑114 (MQ=255)
                                    agtaATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCACAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgtt                                                                                                           >  1:365773‑M2/1‑114 (MQ=255)
                                     gtaATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTATATTTTTTGTGCCGggtaatgactccaacttattgatagtgttt                                                                                                          <  2:928706‑M2/143‑31 (MQ=255)
                                     accccgtcagtagctgaacaggagggacagctgatagaaacagaagagtttggcgcaccccaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCa                                                                                                          >  1:960795‑M1/106‑143 (MQ=255)
                                      taATCTCACACTTATATTTGTGTTGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgtttt                                                                                                         >  2:205912‑M2/1‑112 (MQ=255)
                                       cccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGa                                                                                                        <  2:1200807‑M1/40‑1 (MQ=255)
                                       cccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGa                                                                                                        <  2:1045563‑M1/40‑1 (MQ=255)
                                        aTCTCAAACTTATATTGGGGGGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttat                                                                                                       >  1:670827‑M2/1‑110 (MQ=255)
                                           tcAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgtt                                                                                                    <  1:1294420‑M2/143‑37 (MQ=255)
                                            cAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttc                                                                                                   >  1:303416‑M2/1‑106 (MQ=255)
                                              aaCTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcag                                                                                                 >  1:196065‑M2/1‑104 (MQ=255)
                                                  tagaTTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataa                                                                                             >  2:1174796‑M2/1‑100 (MQ=255)
                                                  cttaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaacttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGc                                                                                             >  1:266410‑M1/93‑143 (MQ=255)
                                                   tgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATACCTTTTCATAAAATTAGCCAGAAAAGACCCGGCa                                                                                            <  1:345313‑M1/52‑1 (MQ=255)
                                                    tatTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttc                                                                                                   >  1:802810‑M2/1‑98 (MQ=255)
                                                    tatTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttc                                                                                                   <  2:164408‑M2/135‑38 (MQ=255)
                                                    tatTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttc                                                                                                   >  1:164408‑M2/1‑98 (MQ=255)
                                                    gaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAAACGCGGCat                                                                                           <  1:1010049‑M1/53‑1 (MQ=255)
                                                     ggcaggtgcgcaagctgctagaagcagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCata                                                                                          >  2:916024‑M1/90‑143 (MQ=255)
                                                      acaggagggacagctgatagaaacagaagccactggagctcctcaaaaacaccatcatacactaactcagtaagtcggcagtatcaccTTGTGCCGCCAATAAATATCTTTTCCTATAATTTGCCCGTAAAGACGCGGCatat                                                                                         >  2:1015415‑M1/89‑143 (MQ=255)
                                                       tGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgccc                                                                                        <  1:1254665‑M2/143‑49 (MQ=255)
                                                       caggagggacagctgatagaaacagaagccactggagcagctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTGCATAAAATTAGCCAGAAAAGACGCGGCAtata                                                                                        >  1:243462‑M1/88‑143 (MQ=255)
                                                           gtggtTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGTAATGTAGGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatg                                                                                    >  2:647817‑M2/1‑91 (MQ=255)
                                                            gggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCt                                                                                   >  1:521156‑M1/83‑143 (MQ=255)
                                                             ggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTa                                                                                  <  1:319030‑M1/62‑1 (MQ=255)
                                                               acagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAtt                                                                                >  1:393386‑M1/80‑143 (MQ=255)
                                                               acagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAtt                                                                                >  1:880608‑M1/80‑143 (MQ=255)
                                                               acagcggatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAtt                                                                                >  1:225476‑M1/80‑143 (MQ=255)
                                                                ttgttgAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgacttt                                                                               >  2:308571‑M2/1‑86 (MQ=255)
                                                                 agctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttcgcagcactatcGTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGACCTCTTTa                                                                              <  2:465979‑M1/66‑1 (MQ=255)
                                                                  gccgatagactctgaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTac                                                                             >  1:814422‑M1/77‑143 (MQ=255)
                                                                   ttgAGGTAAGAATAGAGCCTGAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtc                                                                            >  1:423801‑M2/1‑83 (MQ=255)
                                                                   ctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTaca                                                                            <  1:1084124‑M1/68‑1 (MQ=255)
                                                                   ctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTaca                                                                            <  2:1037040‑M1/68‑1 (MQ=255)
                                                                      aGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATGGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatg                                                                         >  1:259005‑M2/1‑80 (MQ=255)
                                                                          aataatAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagc                                                                     >  1:928706‑M2/1‑76 (MQ=255)
                                                                           ataataGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagct                                                                    <  1:699848‑M2/143‑69 (MQ=255)
                                                                            acagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGAtt                                                                   <  1:865536‑M1/77‑1 (MQ=255)
                                                                            acagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCAAGAAAAGACGCGACATATAgcactatttacagagctcaat                                                                   <  2:640194‑M1/77‑10 (MQ=255)
                                                                             cagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGACCTATTTCAACCTATGAttt                                                                  <  2:41805‑M1/78‑1 (MQ=255)
                                                                               gagagggctaaattcagGTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgacgccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccac                                                                >  2:321859‑M2/9‑71 (MQ=255)
                                                                                  gccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTAAACCGATGATTTCgcag                                                             <  2:596168‑M1/83‑1 (MQ=255)
                                                                                   ccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGCTGATTTCgcagc                                                            <  2:1322239‑M1/84‑1 (MQ=255)
                                                                                           ttCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaa                                                    >  2:389040‑M2/1‑59 (MQ=255)
                                                                                           ttCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaa                                                    <  1:1164333‑M2/143‑85 (MQ=255)
                                                                                            cacctcaaaaacaccatcatacactaaagcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGt                                                   >  1:866574‑M1/51‑143 (MQ=255)
                                                                                              cctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGgttc                                                 <  1:630991‑M1/95‑2 (MQ=255)
                                                                                              aGTTGTGCCATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacga                                                 >  2:734351‑M2/1‑56 (MQ=255)
                                                                                               ctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTaa                                                <  2:129553‑M1/96‑1 (MQ=255)
                                                                                                tcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCTGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTaaa                                               >  2:815500‑M1/47‑143 (MQ=255)
                                                                                                      aaTAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaactaattgatagtgttttatgttcagataatgccccatgactttgccatgcacctccacccgtattctcaacgaccgcgact                                         <  2:1003817‑M2/143‑96 (MQ=255)
                                                                                                       aTAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatggctccaacttattgatagtgttttatgttcagataaggcccgatgactttgtcatgcagctccaccgattttgggaacgacagcgagtt                                        <  1:689011‑M2/143‑97 (MQ=255)
                                                                                                        actatgatacactaaatccgtaagttggaagcatcgccTTGTGCCGCCAATAAATATCTTTTCATAAAATGAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATGTCGCAGCACGTGAGGTTAAAACTTCCTg                                       >  2:1092840‑M1/39‑143 (MQ=255)
                                                                                                           ccAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgaatttgagaacgccagcgacgtccga                                    <  2:740394‑M2/143‑101 (MQ=255)
                                                                                                              ggAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtccc                                 >  1:841371‑M2/1‑40 (MQ=255)
                                                                                                              atacactaattcattaagttggtagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGTAAAGACGTGGCATATAGCCCTATTTACACTGATGATTTCACAGCACGTGAGGTTAAAACTTCCTGATTCAt                                 >  2:848901‑M1/33‑143 (MQ=255)
                                                                                                                acactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGt                               >  2:480348‑M1/31‑143 (MQ=255)
                                                                                                                acactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGt                               >  1:1045563‑M1/31‑143 (MQ=255)
                                                                                                                 cactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTCGCCAGAATAGACGCGGCATATAGCCCTATTTACACAGATGATTTAGCCGCACGTGAGGGTAAAACTTCAGGATTCATGTc                              <  2:154459‑M1/114‑1 (MQ=255)
                                                                                                                 cactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGACGATTTCGCAGCACGTGAGGTTACAACTTCCTGATTCATGTc                              <  2:882579‑M1/114‑1 (MQ=255)
                                                                                                                    tAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacggcgacttccgtcccagccgt                           <  1:374521‑M2/143‑110 (MQ=255)
                                                                                                                      aatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTGTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACAtt                         >  1:586476‑M1/25‑143 (MQ=255)
                                                                                                                      aGGAATTCGTAGTTGGTCTTTATTTTGTGCCGtgtcatgtctccatcttattgatagtgttttatgttgagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgc                         >  2:645417‑M2/1‑32 (MQ=255)
                                                                                                                       ggAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgtctccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagagctacagcgacttccgtcccagccgtgcc                        >  2:1225606‑M2/1‑31 (MQ=255)
                                                                                                                        gAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatttgagaacgacagcgacttccgtcccagccgtgcccg                       <  1:781797‑M2/143‑114 (MQ=255)
                                                                                                                         cagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTa                      <  1:1177172‑M1/122‑1 (MQ=255)
                                                                                                                            taagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACCACGATGATTTCGCAGCACGTGAGGTTAAAACTTCCAGATTAATGACTCATTTTATgg                   <  2:73544‑M1/125‑1 (MQ=255)
                                                                                                                             cAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgacattgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgtccggtgc                  <  1:724275‑M2/143‑119 (MQ=255)
                                                                                                                              aaaaTTGGTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgct                 >  2:366285‑M2/1‑24 (MQ=255)
                                                                                                                                   tGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctc            >  1:28507‑M2/1‑19 (MQ=255)
                                                                                                                                   gcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGAtt            <  1:516096‑M1/132‑1 (MQ=255)
                                                                                                                                     ttCTTTATTTTGTGCCGggtaatgactgcaacttattgatagtgttttatgttcagataatgcccgatgactttgtcattcagctccaccgattgtgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcag          >  1:1150238‑M2/1‑17 (MQ=255)
                                                                                                                                      gcagcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATc         >  1:8180‑M1/9‑143 (MQ=255)
                                                                                                                                       catcaccTCGTGCCGCCAATAAATATCTTATCATAAAATTAGCCAGAAAAGACGCGGGATATAGCCCTATTTACACCGATGATTTCGCTGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCg        >  1:562888‑M1/8‑143 (MQ=255)
                                                                                                                                        atcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGCTTCATGTCACATTTTATGTGGAGATTATCGt       <  1:794882‑M1/137‑1 (MQ=255)
                                                                                                                                          caccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAg     <  1:476638‑M1/139‑1 (MQ=255)
                                                                                                                                           tttttgGACCGggtaatgactccgacttagtgatagtgttttgtcttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcag    >  2:1128262‑M2/2‑11 (MQ=255)
                                                                                                                                            ccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGc   <  1:501162‑M1/141‑1 (MQ=255)
                                                                                                                                             cTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCGAGGAATGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCt  <  2:158133‑M1/142‑1 (MQ=255)
                                                                                                                                             cTTGTGCCGCCAATAAATATCATTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTACCTGATTCATATCCAAAGAGAGGGGGAGATTAACGTAGGCt  <  2:517198‑M1/142‑1 (MQ=255)
                                                                                                                                              |                                                                                                                                             
GATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCT  >  NC_000913/1292890‑1293173

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.