New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 225998	NA (NA)	6 (0.080)	5/274	10.5	NA	noncoding (240/2904 nt)	rrlH	23S ribosomal RNA of rrnH operon
	?	NC_000913	= 226015	NA (NA)					noncoding (257/2904 nt)	rrlH	23S ribosomal RNA of rrnH operon
Rejected: Coverage evenness skew score above cutoff.

CCAGTGTGTTTCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTG‑GAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCT  >  NC_000913/225887‑226157                                                                                                                                 |                                                                                                                                                ccAGTGTGTTTCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTCAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGACCGGGGAGGAGCCCag                                                                                                                                   >  1:10075/1‑143 (MQ=17) ccAGTGTGTTTCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCGGTAGCGGCGAGCGAACGGGGAGGGGCCCag                                                                                                                                   >  1:63354/1‑143 (MQ=17) ccAGTGTGTTTCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGGCCag                                                                                                                                   >  1:313291/1‑143 (MQ=17)  cAGTGTGTTTCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGCAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGGGCCCaga                                                                                                                                  >  1:232024/1‑143 (MQ=17)     tgtgcTTCGAAACACGATCATTCACTGAATCCATAGGATAATGAGGAGAACCGAGGGAACTGAAACATCGAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGcc                                                                                                                               <  1:353094/143‑1 (MQ=11)         tttCGACACACTATCATTAACTGAATCCATCCTTTTTATTGACTTACTGGGGGAACTGAAACATCTAAGGACACCGTGGAGAGGTTAACAACCTAGTGCCCCCCGCCATCGGCGGGACGGCGGCGAGGAGCCCAGAGCGTGaa                                                                                                                           >  2:24711/1‑143 (MQ=2)         tttCGACACACTATCATTAACTGAATCCATAGGTCAATGAGGCGCACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATCCCCCCAGTAGCGGCGAGCGAACGGGGGGGAGcccggcagcggaa                                                                                                                           >  2:1035150/1‑133 (MQ=11)          ttCGACAGACTAGCATTAGCTGAATCCATAGGTTAAGGAGGCGAACCGGGGGCACTGACACATCCAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAAt                                                                                                                          <  2:1142739/143‑1 (MQ=11)          ttCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGACCCGGGGGAACTGACACATCTAAGTCCCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAAt                                                                                                                          <  1:59091/143‑1 (MQ=12)          ttCAACACACTATCATTAACTGAACCCATAGGGGAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAAt                                                                                                                          <  1:353110/143‑1 (MQ=255)           tCGACACACTATCATTAACTGAATCCATAGGTTCATGCGGCAACCCGGAGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATc                                                                                                                         <  1:109552/143‑1 (MQ=11)           tCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGGACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCGAGTCGCGGCGAGCGAACGGGGAGGGGCCCAGAGCCTGAATc                                                                                                                         >  1:1136011/1‑143 (MQ=255)            cGACACACTATCGTTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGACTAACAACGAAACCGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCa                                                                                                                        <  1:1322425/143‑1 (MQ=11)              acacccTATCATTAACTCACTCCATAGGTCAAGGAGGCGAACCGGGGGAACTGAACCCTCTAAGTACCCCGAGGAAAAGAAAGCAACCGAGCTTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgt                                                                                                                      <  1:1277505/143‑1 (MQ=11)              acacacTCTCATTACCTGAATCCACAGGGTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAACTCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgt                                                                                                                      <  1:130847/143‑1 (MQ=11)              acacacTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGCGCCCagaagacgaaacagg                                                                                                                      >  2:129644/1‑131 (MQ=11)              aaacatTATCAGTAAATGAATCCAAAGATTAATGAGGCGAACCGGGGGAACAGAAACAACTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCACCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgt                                                                                                                      <  1:55888/141‑1 (MQ=11)                acacTCTCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTGCCCCGCGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgt                                                                                                                    <  2:267580/143‑1 (MQ=12)                   cTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAGGAAATCAACCGAGATTCCACCCGTAGGGGCGAGCGAAAGGGGAGGAAGCCAGCGCCTGAGTCAgagcggg                                                                                                                 >  2:883678/1‑137 (MQ=11)                    tATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGCAGCGGCGAGCGGACGGGGAGGAGCGCAGCGCCGGaaggcgggcgcga                                                                                                                >  2:45457/1‑132 (MQ=11)                        aTTAAGTGAATCCATAGGTTGATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTa                                                                                                            <  2:758614/143‑1 (MQ=17)                        aTTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGGGAGTTa                                                                                                            >  1:221603/1‑143 (MQ=17)                        aTTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACACCGAGGAAAAGAAATCAACCGAGATTCCCCGAGTAGCGGCGACCGAACGGGGAGGAGCCCGGAGACTGGATGAgagagggagtga                                                                                                            >  2:1131914/1‑132 (MQ=11)                          tAACTGAATCCATAGGTTAAGGAGGCGAACCGGGGGGCGTGGAACATCAAAGGACCGCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGt                                                                                                          <  1:955469/143‑1 (MQ=11)                             cTGCATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAACCATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGa                                                                                                       <  1:988385/143‑1 (MQ=17)                              tGATTCCATAGGGTAATGAGGCGGACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGaa                                                                                                      <  1:162425/143‑1 (MQ=12)                                 aTCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAGTCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCACAGCCTGAATCAGTGTGTGTGTCAGCGGAAGCg                                                                                                   >  2:1295145/1‑143 (MQ=255)                                    cagaGGGTAATGATGCGAACCGGGGGAACGGAAACAACTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCt                                                                                                <  1:136136/140‑1 (MQ=11)                                    cATAGGTGAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCt                                                                                                <  1:884588/143‑1 (MQ=17)                                     aTAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCGCCCAGTAGCGGGGAGCGAACGGGGAGGAGCCCAGAGCCCGAATCAGCGTGTGGGTGAGTGGagggggctg                                                                                               >  2:504404/1‑135 (MQ=11)                                       aGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGGGTCTG‑Ga                                                                                            >  2:1139690/1‑143 (MQ=17)                                          taaaTGAGGCGAACCGGGGGAACTGAAACATCTAAGGACCCCGAGGAAAAGAAATCACCCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTG‑GAAAg                                                                                         <  1:504907/141‑1 (MQ=12)                                            aaTGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGGTAGTGGAAGCGTCTG‑GAAACgc                                                                                       >  1:478153/1‑143 (MQ=17)                                                  gCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTG‑GAAAGGCGCGCGa                                                                                 >  2:1182816/1‑143 (MQ=32)                                                  gCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTG‑GAAAGGCGCGCGa                                                                                 >  1:804897/1‑143 (MQ=32)                                                        cgcgggACCTGGTACATCTAAGTGCCCCGAGGAAAAGAAAGCAACCGAGGTCCCCCCGGTTGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTG‑GAAAGGCGCGCGATACAgg                                                                           <  2:505151/140‑1 (MQ=11)                                                          ggggAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCAAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCCGAATCAGTGTGTGTGTTAGTGGAAGCGTCTG‑GAAAGGCGCGCGATACAGGGt                                                                         >  2:884972/1‑143 (MQ=17)                                                                 tGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGACCGGGGAGGAGCCCAGAGCCTGAATCAGCGCGTGTGCTAGTAAAAGCGTCCG‑GAAAGGCGCGCGATACAGGGCGGCAGcc                                                                  >  2:1022023/1‑143 (MQ=11)                                                                  gAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATGCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTG‑GAAAGGCGCGCGATACAGGGTGACAGccc                                                                 <  1:379291/143‑1 (MQ=17)                                                                   agaCATCTAAGGTCCCCGAGGCAAAGATATCAACCGAGATTCCGCCAGTAGCCGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTTGAAGCGTCTG‑GTATGGCGCGCGATACAGGGTGACAGcccc                                                                <  2:912533/141‑1 (MQ=11)                                                                   aaaCATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGGCTGAATCAGAGTCCGCGCCAGAGGAAGCGTCTG‑GAAAGGCGCGCGATAGCGGGGGACAGaccc                                                                >  2:151120/1‑143 (MQ=11)                                                                   aaaCATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTG‑GAAAGGCGCGCGATACAGGGTGACAGcccc                                                                >  1:15403/1‑143 (MQ=32)                                                                   aaaCATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGAGCGCGCGTTAGTGGAAGCGTCCG‑GCAAGGCGCGCGATACAGGGTGACAGcccc                                                                >  2:477226/1‑143 (MQ=11)                                                                       aTCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTG‑GAAAGGCGCGCGATACAGGGTGACAGCCCCGTac                                                            >  1:1018027/1‑143 (MQ=32)                                                                       aTCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACAGGGAGGAGCCCAGAGCCTGAATGAGCGTGTATGTTAGTGGAAGAGAATG‑GAAAAGCGCACGCTACAGGGTGACAGCCCCgcaa                                                            >  2:599365/1‑140 (MQ=11)                                                                         cTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTG‑GAAAGGCGCGCGATACAGGGTGACAGCCCCGTacac                                                          >  1:253896/1‑143 (MQ=32)                                                                          tAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTG‑GAACGGCGCGCGATACAGGATGACAGCCCCGTAcaca                                                         >  1:712396/1‑143 (MQ=17)                                                                           aaGTGCCCGGAGGAAAAGAAATCAACCGAGAGTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTG‑GAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACaa                                                        <  2:121685/143‑1 (MQ=12)                                                                                  ccGAGGAAAAGCAGTCAACCGAGATGCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTG‑GAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGca                                                 <  2:1109509/143‑1 (MQ=12)                                                                                  ccGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTG‑GAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGca                                                 <  1:432008/143‑1 (MQ=32)                                                                                     aGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCCGAATCAGTGTGTGTGTCAGCGGTA‑CACCGGTGAAAGGAGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACAt                                              >  1:1308629/1‑143 (MQ=11)                                                                                      gggaaaGAAATCGACCCAGATGCCTCCATGCGCGGCGGGCGAACGGGGAGGAGCCCAGAGCCTGGAGCAGTGTGTGTGTTAGTAGAAGCGTCTG‑GAAAGGCGGGCGAGACAGGGTGACAGCCCCGTACACAAAAATGCACATg                                             <  2:331917/140‑1 (MQ=11)                                                                                      ggAGAAGAAAGCAACCGAGATGCCCCCAGTAGCGGCGGGCGAGCGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTG‑GAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATg                                             <  2:54645/143‑1 (MQ=11)                                                                                        aaaaGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTG‑GAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCt                                           <  2:614865/143‑1 (MQ=32)                                                                                          aaGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTG‑GAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCtgt                                         <  1:1103919/143‑1 (MQ=32)                                                                                          aaGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTG‑GAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCtgt                                         <  1:57819/143‑1 (MQ=32)                                                                                            gAAAGCAACCGCGATGCCCCCCGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTG‑GAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGa                                       <  1:257180/143‑1 (MQ=255)                                                                                               aTCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGGGTGTGTGTTAGTGGAAGCGTCTG‑GAAAGGCGCGCGATACAGGGTGACACCCCCGTACACAACAATGCACATGCTGCGAGcg                                    >  1:1282442/1‑142 (MQ=255)                                                                                                  aaCCGAGATTCCCCCAGTAGGGGCGAGCGCACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGGGTGTAAGCGCAAGCGTCCG‑GAAAGGCCCGCGGTACCGGGGGCCAGCCCCGCACGCCAAAATGCTCATGCTGCGCGCCCGa                                 >  2:514446/1‑143 (MQ=2)                                                                                                   aCCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTG‑GAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGAt                                <  1:1262279/143‑1 (MQ=32)                                                                                                     cGAGATTCCCCCAATAGCGGCGAGCGAAAGGCGAGGAGCACAGAGCCTGAAACAGGGTGTGTGTGAGAAGAAGCGTCTG‑GAAAGGCGCGCGATACGGGGAGAAAACCCCGCACACAGAAATGCACATGCCGAGAGCGCGaaag                              >  2:1034438/1‑140 (MQ=2)                                                                                                      gagaTTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAACCCAGAGCCTGAATCAGTGTGTGTGGTAGGGGAAGCGGCTG‑GAAAGGCGCGCGATACAGGGTGACAGCCCCGGACACACAAAGGCACACGCTGTGAGccgggtgag                             >  2:303705/1‑135 (MQ=11)                                                                                                         atgccccgAGTGGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTG‑GAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAg                          <  1:1240963/140‑1 (MQ=12)                                                                                                          ttCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTG‑GAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAgg                         <  1:397805/143‑1 (MQ=32)                                                                                                            cccccGGGAGGGGCGGGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTG‑GAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGc                       <  2:489017/143‑1 (MQ=255)                                                                                                             ccccAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTG‑GAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCg                      >  1:780322/1‑143 (MQ=32)                                                                                                              cccAGTAGCGGCGAGCGAGCGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTG‑GAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCgg                     <  2:10075/143‑1 (MQ=17)                                                                                                              cccAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCCGAATCAGTGTGTGTATTAGTGGAAGCGTCTG‑GAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCgg                     >  2:470345/1‑143 (MQ=17)                                                                                                                cggTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTG‑GAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGa                   <  2:364494/141‑1 (MQ=17)                                                                                                                cAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGGGTGTGTTAGTGGAAGCGTCTG‑GAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGa                   <  2:896048/143‑1 (MQ=17)                                                                                                                     gcggcgGGCGAGCGGGGAGGAGCCCAGAGCCTGAAGCAGTGTGTGTGCTAGTGGAAGCGTCTG‑GAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGt              <  2:612009/143‑1 (MQ=255)                                                                                                                     gcggcgAGCGAACGCGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTG‑GAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGt              <  1:516241/143‑1 (MQ=17)                                                                                                                      cggcgCGCGACCGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTG‑GAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTg             <  1:806778/143‑1 (MQ=17)                                                                                                                      cggcgAGCGAGCGGGGGGGCGCCCGGGGCCTGAATCAGGGTGGGTGTTAGTGGAAGCGTCTG‑GAAAGGCGCGCGAGACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTg             <  2:348724/143‑1 (MQ=11)                                                                                                                      cggcgAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTG‑GAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTCGGGCGGGACACGTg             >  2:696224/1‑143 (MQ=17)                                                                                                                      cggcgAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTG‑GAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTg             <  2:692984/143‑1 (MQ=32)                                                                                                                              gaACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTG‑GAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCATg     >  1:1269007/1‑143 (MQ=17)                                                                                                                                gcGGGGGGGAGCCCAGGGCCGGGATCCGTGTGTGTGTTGGTGGAAGCGGCTG‑GAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTc   <  2:890620/142‑1 (MQ=11)                                                                                                                                aCGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTG‑GAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTc   >  2:1307036/1‑143 (MQ=32)                                                                                                                                 cGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTG‑GAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCt  <  1:1182816/143‑1 (MQ=32)                                                                                                                                 |                                                                                                                                                CCAGTGTGTTTCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTG‑GAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCT  >  NC_000913/225887‑226157

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.