New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1096988 =75 (0.990)6 (0.080) 6/276 9.9 7.5% intergenic (+159/+577) ycdU/serX putative inner membrane protein/tRNA‑Ser
?NC_000913 1097010 = 74 (1.000)intergenic (+181/+555) ycdU/serX putative inner membrane protein/tRNA‑Ser
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGT  >  NC_000913/1096868‑1097151
                                                                                                                                              |                                                                                                                                             
cTGTTCTCTCTTGCGCATTTTGATTGTTGCCTGGGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGctc                                                                                                                                               <  1:796932/143‑1 (MQ=255)
 tGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTGCGTACGAGccct                                                                                                                                              >  2:408289/1‑143 (MQ=255)
      tctctTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCttt                                                                                                                                         >  1:202982/1‑143 (MQ=255)
      tctctTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCttt                                                                                                                                         >  1:993371/1‑143 (MQ=255)
        tctTGCGCGTTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATCTCCCCTCGCTCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTaa                                                                                                                                       <  2:81011/143‑1 (MQ=255)
        tctTGCGCATTTGGATTGTTGACTGAGTAACCAGACAGTTGATGTGCATGATTTCCCCCCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTaa                                                                                                                                       <  1:703433/143‑1 (MQ=255)
           tGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAatg                                                                                                                                    >  1:135042/1‑142 (MQ=255)
              gcATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATgg                                                                                                                                 <  1:1208716/143‑1 (MQ=255)
              gcATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCATCGCCCTAACAGACGTGGGCGGGGGCACCCGGAGTGTACAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTATTTcaaaaaag                                                                                                                                 >  2:744659/1‑138 (MQ=37)
                atttttataggggACTGAGTATCTAGACGGTTGATGTGAACAATTTCCTCTCGCCCTAACAGACGTGGGCTGTTGCCCCCTTTGTTTTCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCg                                                                                                                               <  2:464758/131‑1 (MQ=16)
                aTTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACCGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGATCTTCTTTAAATATGGCg                                                                                                                               >  1:207363/1‑143 (MQ=255)
                aTTTTGATTGTTGACTGAGCATCCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCg                                                                                                                               <  1:664040/143‑1 (MQ=255)
                  tttGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGACACAAAAGCCCGTCCTTTCGTCCGCGCTCTTCTTTAAATATGGCGGt                                                                                                                             >  1:798855/1‑143 (MQ=37)
                       ttgttgACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAggg                                                                                                                        >  1:453699/1‑143 (MQ=255)
                          ttgCCTGCGCAACCAGACGGTTCAGGTGCCCGAGTTCCCCTCGCCATAAAAGACGTGGGCGGGGGCACCCGGGGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAgggggg                                                                                                                     <  1:1106041/143‑1 (MQ=18)
                          ttgACTGAGTAACCAGACAGTTGTTGGGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAgggggg                                                                                                                     >  2:1154942/1‑143 (MQ=255)
                          ttgACTGAGTAACCAGACAGTTGGTGGGCACGATTTCCCCGCGCCCTAACAGACGGGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAgggggg                                                                                                                     <  2:404828/143‑1 (MQ=255)
                           tgACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAggggggg                                                                                                                    >  2:812649/1‑143 (MQ=255)
                           tgACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAggggggg                                                                                                                    >  2:448840/1‑143 (MQ=255)
                            gACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCGCGTCTTTAAATATGGCGGTGAGGGGGGGa                                                                                                                   >  1:812254/1‑143 (MQ=255)
                             accgAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGAAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGAt                                                                                                                  <  2:808303/140‑1 (MQ=255)
                             aCTGCGTAACCAGACAGTTGACGTCCACGATTCCCCCCCGCCCTAACAGCCGTGGGCGGGGGCACCCGGTGTGGGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGAt                                                                                                                  <  1:509367/143‑1 (MQ=21)
                              cTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGAtt                                                                                                                 >  1:464736/1‑143 (MQ=255)
                                gAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGa                                                                                                               >  1:1051021/1‑143 (MQ=255)
                                 gagaaCCAGGTAGGTGATGGGCACGATTCCCCCTCGCCCTCACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGGACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGAc                                                                                                              <  2:1151803/140‑1 (MQ=18)
                                 aGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGCAAACAAAGCCCGTACTTTCGTACGCGCTCTTCTTTCAATATGCCGGTGACGGGGGGCTTGAc                                                                                                              >  1:581487/1‑143 (MQ=25)
                                       cAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACtcgctt                                                                                                        <  1:1061791/143‑1 (MQ=255)
                                         gACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACtcgcttcg                                                                                                      <  1:1530/143‑1 (MQ=255)
                                          aCAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGCTTGATtcgctgcgc                                                                                                     >  2:1130051/1‑143 (MQ=255)
                                           cAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATGTGGCGGTGAGGGGGGGATTGACtcgcttcgct                                                                                                    <  2:135042/143‑1 (MQ=255)
                                           cAGTTGAGGTGCACGCTTGTCGTGGGCCCTAGCAGGCGTGGGCGGGGGCACCCGGTGTGGGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACtcgcttcgct                                                                                                    <  2:664568/143‑1 (MQ=14)
                                            aGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTtcgctc                                                                                                   <  1:870916/143‑1 (MQ=255)
                                               tGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGcc                                                                                                <  1:104237/143‑1 (MQ=255)
                                                  tgtgCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTg                                                                                             >  1:736478/1‑143 (MQ=255)
                                                    tgCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCCGTGAGGGGGGGATTGACTCCCTCCGCTTGCCCTTCg                                                                                           >  2:581936/1‑143 (MQ=18)
                                                    tgCACGATTTCCCCGCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCg                                                                                           <  1:281657/143‑1 (MQ=255)
                                                     gCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGCGGGGGGGATTGACTCGCTTTGCTCGCCCCGCgg                                                                                          >  2:918929/1‑143 (MQ=255)
                                                        cggtggctgcgcGCCCTAGGGGAGGTGGTCTGGGGCCCCCGGTGTGTGCAATAGACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCa                                                                                       <  2:202982/132‑1 (MQ=11)
                                                               cccTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCt                                                                                >  2:1188915/1‑143 (MQ=255)
                                                                 cccGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGTATAAAAGGCCCGTACTTTCGGACGAGCTCTTCTGTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCa                                                                              <  2:13714/141‑1 (MQ=17)
                                                                   cGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGGGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATAAGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACt                                                                            <  1:1131993/143‑1 (MQ=255)
                                                                     gccTAACCGACGGTTGCGGGGGCTCCCGGTGTGTGCAATAGACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGc                                                                          <  2:687775/142‑1 (MQ=11)
                                                                       cTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAGATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGt                                                                        >  1:675048/1‑143 (MQ=255)
                                                                          ccAGACGGGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCa                                                                     <  1:799816/142‑1 (MQ=255)
                                                                            aGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCGTTCCATATGGCGGTGAGGGGGGGGTTGACTCTCTTCGCTCGCCCTGCGGGCCGCCCGCTCACTGCGTTCACg                                                                   >  1:151910/1‑143 (MQ=14)
                                                                              tcGTGGGCGGGGGCTCCGGCGGTGGGCAATAGACGAAAAAAAAGCCCGTATTTTCGTACGAGCTCTTCTTTAATTATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGt                                                                 <  2:371776/142‑1 (MQ=11)
                                                                              aCGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGt                                                                 >  1:130385/1‑143 (MQ=255)
                                                                              aCGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGt                                                                 >  1:131095/1‑143 (MQ=255)
                                                                               cGTGGCCGGGCGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTc                                                                <  1:484991/143‑1 (MQ=25)
                                                                                gTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCt                                                               <  1:1154942/143‑1 (MQ=40)
                                                                                gTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCACGCCCTGCGGGCGGCGCGCTCACTGCGTGCGCGGTcg                                                               >  2:251524/1‑142 (MQ=14)
                                                                                  gggCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGt                                                             <  2:1121408/143‑1 (MQ=38)
                                                                                     cGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCGCGTACTTTGGTAGGAGGACAGCGCTCAAGCTGAATATTACTTTGGGCTTGACTCGCTTTGCTCGCGCTGCAGGCAGCCCGCTGAGTGCGTTCCCGGTCTGTccg                                                          >  1:306155/1‑142 (MQ=2)
                                                                                        gggCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACt                                                       >  2:728342/1‑143 (MQ=33)
                                                                                         ggCAGCCGGTGTGTGCAATATACGAAAAGAAAGCCCGTGTGTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTg                                                      <  2:1116700/143‑1 (MQ=11)
                                                                                         ggCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTg                                                      <  1:448840/143‑1 (MQ=32)
                                                                                          gCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTgg                                                     <  1:994158/143‑1 (MQ=32)
                                                                                           cACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGc                                                    <  2:750939/143‑1 (MQ=31)
                                                                                            aCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCt                                                   <  2:398267/143‑1 (MQ=11)
                                                                                                               cGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAcccc                                <  1:1212377/143‑1 (MQ=32)
                                                                                                                gAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCACTTCACTCGCCCTGCGGGAAGCCCGCTCACGGCGTTCACCGTCTGTCCAACTGGCTGTCGCCaatactcaaacccc                               >  2:768070/1‑130 (MQ=1)
                                                                                                                 acagacgaGCCCGTAGTTTCGTGCGAGCTCTTCTTTAAATGTGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCACGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCg                              <  2:159484/136‑1 (MQ=11)
                                                                                                                  aaaaaaaGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCgg                             >  1:358141/1‑143 (MQ=32)
                                                                                                                      aaaGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCgg                         >  1:1205173/1‑143 (MQ=32)
                                                                                                                       aggCCCGGGCTTTCGTACGAGCTCTTCTTTAAAGAGGGCGGGGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAccgggggtcgac                        <  2:563536/141‑11 (MQ=11)
                                                                                                                           ccgtccgtTCGTGCGAGCTCTTCTGTAGATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCtt                    <  2:17142/143‑1 (MQ=11)
                                                                                                                           ccGTACTTTCGTACGAGCGCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCtt                    <  1:1169313/143‑1 (MQ=17)
                                                                                                                           ccGTACGTTCGTAGGAGCTCTGCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCtt                    <  1:517738/143‑1 (MQ=12)
                                                                                                                            cggaCTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGCCTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTtc                   <  2:45653/140‑1 (MQ=17)
                                                                                                                            cGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTtc                   <  2:624421/143‑1 (MQ=32)
                                                                                                                             gTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGCTCTGTCCATCTGGCTGTCCCCAGTTGTCGACCCCCGGTcagagcgcca                  >  2:713963/1‑134 (MQ=11)
                                                                                                                              tACTTTCGTACGTGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTtctc                 <  1:635951/143‑1 (MQ=17)
                                                                                                                               aCTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCa                <  1:551724/143‑1 (MQ=32)
                                                                                                                                 tttCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCCCCGCGTTCACGGCCTGTCCACCTCGCTGTCGCCAGTCGTCGACCCCCGGGCGGGGCCTCCCATc              >  2:429085/1‑143 (MQ=11)
                                                                                                                                    cgtgtgggCTCTTGCTTAAGTGGGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATcccc           <  2:1287223/136‑1 (MQ=11)
                                                                                                                                       aCGAGCTCTTCTTTAAATAGGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCg        <  2:30751/143‑1 (MQ=17)
                                                                                                                                             tcttctTTATCTATGGCGGTGAGGGGGTGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGTGCTTCTCATCCCCCCGgtgtgt  <  1:91611/143‑1 (MQ=255)
                                                                                                                                              |                                                                                                                                             
CTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGT  >  NC_000913/1096868‑1097151

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.