| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 4,001,644 | Δ5 bp | coding (220‑224/951 nt) | corA → | magnesium/nickel/cobalt transporter |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 4001644 | 4001648 | 5 | 52 [0] | [0] 53 | corA | magnesium/nickel/cobalt transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4001643 | 0 (0.000) | 52 (0.950) | 43/284 | 0.2 | 100% | coding (219/951 nt) | corA | magnesium/nickel/cobalt transporter |
| ? | NC_000913 | 4001649 = | 0 (0.000) | coding (225/951 nt) | corA | magnesium/nickel/cobalt transporter | |||||
AGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCC > NC_000913/4001502‑4001781 | aGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATc < 2:577561‑M1/143‑2 (MQ=255) gTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATct > 2:421556‑M1/1‑141 (MQ=255) aTGGTTTGATCTTGTCGAACCGGACGACGGCGATCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctcc < 1:439438‑M1/143‑5 (MQ=255) aTGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctcc < 2:362567‑M1/143‑5 (MQ=255) aTGGATTGAGCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctcc < 1:421833‑M1/143‑5 (MQ=255) ttGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACCATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCGTCGGCACGTCTCTTTGACGACGACGCCGACCTGCAAccccttctc > 1:659797‑M1/1‑134 (MQ=255) ttGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGCCGACGGCCTGCACctccttctt > 1:696700‑M1/1‑134 (MQ=255) ctgATCTGGTCGAACCGGAGGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttctt < 1:866897‑M1/142‑10 (MQ=255) tCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCCTccccctcttcctc > 1:847666‑M1/1‑130 (MQ=255) ccgACCCGGACGACGACGAGCGAGTGCGGGTACGATCGGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACCTCGAAGCATCGGCACGTTTCTTTGAAGACGACGCCGGCCTGCATctccttcttcttctttga < 2:283181‑M1/142‑19 (MQ=255) cGAACCGGACGACGACGAGCGACGGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaa < 2:785246‑M1/143‑20 (MQ=255) acgacgacgAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCACCCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcgga < 1:608748‑M1/143‑28 (MQ=255) acgacgacgAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcgga < 1:281475‑M1/143‑28 (MQ=255) cgacgacgaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaa < 2:545737‑M1/143‑29 (MQ=255) gctgcgagcgaCTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGTAGCATCGGCACGTTTCTTTGAAGTCGACGACGGCTTGCATctccttcttcttctttgaagatgcggaaga < 1:508820‑M1/139‑31 (MQ=255) acgacgaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaaga < 2:419460‑M1/143‑31 (MQ=255) tgcagcgGCTGCGCGTGCAAGCTGAAGTTGGCCAGAGTCTGGCAACCCGCCCGGAACTGGAAGACATCGCAGCAGCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatca < 1:466247‑M1/140‑34 (MQ=255) gaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgacgatgcggtcgctcacg > 2:43957‑M1/1‑108 (MQ=255) tGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaa < 2:120544‑M1/143‑43 (MQ=255) tACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccac < 2:44136‑M1/143‑49 (MQ=255) tACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTCTCTTTGAAGACGACGCCGGCGTGCATctccttcttcttctttgaagatgcggaagatcacgcgcgtaactccac > 1:878360‑M1/1‑95 (MQ=255) aaTCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccgggaactccactgt > 1:791071‑M1/1‑92 (MQ=255) tGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccagtgtggca > 2:824884‑M1/1‑88 (MQ=255) tGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccacagaggca > 2:816106‑M1/1‑88 (MQ=255) tGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttctgctttgaagatgcggaggatcacgccggtaactccactgtggca > 2:592629‑M1/1‑88 (MQ=255) ccAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatc > 2:668998‑M1/1‑79 (MQ=255) gagCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgt < 2:930821‑M1/143‑68 (MQ=255) gCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtga < 2:223358‑M1/143‑70 (MQ=255) ccTGGCACCCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgggat > 1:388333‑M1/1‑73 (MQ=255) ttgGCAACGCGCCCGTAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatg < 2:475142‑M1/142‑72 (MQ=255) tGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctcctgcttgttctttgaagctgcggaagatcacgccggtaactccactacgtcatttaccgcgcgagagag > 1:60179‑M1/1‑71 (MQ=255) ccgcccgGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcctttaccctccgtgatggtcgtctg > 2:769541‑M1/1‑64 (MQ=255) gcccgGAACTGGAAGACATCGAAGCATCGGCGCGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtt < 1:729745‑M1/143‑82 (MQ=255) ccgGAACTGGAAGACATCGAAGCATCGGCACGAAAAACTTAAGTCTACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgttta < 2:396896‑M1/143‑84 (MQ=255) ggAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttact < 2:918950‑M1/143‑86 (MQ=255) aaCTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactct < 1:421556‑M1/143‑88 (MQ=255) cTGGAAGACATCGAAGCAGCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgc < 2:866025‑M1/143‑90 (MQ=255) gAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttgctctgcgtg > 2:13635‑M1/1‑51 (MQ=255) acgacATCGAATCCTCGGCACGTTTCTTTGCAGACGACCACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtga < 1:473989‑M1/141‑94 (MQ=255) gACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagc > 2:6144‑M1/1‑48 (MQ=255) cATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgt < 1:611346‑M1/143‑98 (MQ=255) aTCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgcgagcgtg > 1:71622‑M1/1‑45 (MQ=255) cGACGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccgtcttcttcttggaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaa < 1:358785‑M1/143‑101 (MQ=255) tCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgggtgagagtgaagtcccac > 2:347980‑M1/1‑36 (MQ=255) cGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgattttcggcggtttactctgcgtgagcgtgaactgcccgc < 2:907784‑M1/143‑109 (MQ=255) ggCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgcgatggtcgtctgtttgctctgcgtgcgcgtgcactgtccgct > 2:326563‑M1/1‑34 (MQ=255) gAAGAGGACGACGGCCTGCATctccttcttcttcttttaagatgcggaagatcacgccggtaactcctctgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatc < 1:392207‑M1/143‑123 (MQ=255) atgacgacggcggCGTGCTGctcgttcttcttctttgaggaggcggatgatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaagtgcccgcttttcgtctgtatcg < 1:916955‑M1/141‑124 (MQ=255) gacgacgacGGCCTGCATctccttcttcttctttgaagatgcggaagataacgccggtagatccactgtggcatttacaatcagtgatggtcgtcagtttgctctgcgggagcgtgaactgcctgcttttggtctgtagcgta > 2:193577‑M1/1‑18 (MQ=255) cgacgGCCTGCATctccttcttcttcttggaagatgcggaagatcacgccggtaactccactgtggcatgtaccatccgtgttggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgt < 2:378340‑M1/143‑131 (MQ=255) ggCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccaccgtggcatttaccatccgtgatggtcgtctgttgcctctgcgtgagcgtgaactgcccgcttttcgtctgtgtcgtacgcgtggcc > 2:63511‑M1/1‑9 (MQ=255) tGCATtttcttcttcttctttgaagatgcggaagatctcgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcttgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgcccgtag < 1:389846‑M1/143‑139 (MQ=255) | AGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCC > NC_000913/4001502‑4001781 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |