New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	193444 =	32 (0.800)	3 (0.080)	3/264	5.6	9.1%	intergenic (+15/‑77)	frr/dxr	ribosome recycling factor/1‑deoxy‑D‑xylulose 5‑phosphate reductoisomerase
	?	NC_000913	193489 =	30 (0.810)					intergenic (+60/‑32)	frr/dxr	ribosome recycling factor/1‑deoxy‑D‑xylulose 5‑phosphate reductoisomerase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ATGTACAGAAACTGACTGATGCTGCAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGTTGCAGCACGCTGGACGTGGTGCGCCATAATCCCGAACACTTCCGCGTAGTTGCGCTGGTGGCA  >  NC_000913/193347‑193625                                                                                                                                               |                                                                                                                                         aTGTACAGAAACTGACTGATGCTGCAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTGGCGGCGTGTTg                                                                                                                                          >  1:166961/1‑143 (MQ=255)     aCAGAAACTGACTGATGCTGCAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTGGCGGCGTTTGGCttt                                                                                                                                      >  1:243595/1‑143 (MQ=255)       aGAAACTGACTGATGCTGCAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTGTGATTTCTTGAACGACAAAAACGCCGCTCAGGAGATCCTTGCGGATCGGCTGGCGGCGTTTTGCttttt                                                                                                                                    >  1:522454/1‑143 (MQ=255)                ctgaTGCTGCAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTGGCGGCGTTTTGCTTTTTATTCTGtct                                                                                                                           <  1:412373/143‑1 (MQ=255)                  gaTGCCGCAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGCTCGGCTGGCGGCCTTCTGCTCTTCCTTCTGTCTCa                                                                                                                         >  1:151678/1‑143 (MQ=255)                     gctgcAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAAct                                                                                                                      <  1:216436/143‑1 (MQ=255)                       tgcAATCAAGAAAATTGAAGCGGCGCTGACAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTGGCGGCGTTTTGCTTTTTATTCTGTGTGAActct                                                                                                                    >  1:688775/1‑143 (MQ=255)                        gcAATCAAGAAAATTGAGGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTg                                                                                                                   <  1:252827/143‑1 (MQ=255)                              aaGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGtt                                                                                                             >  1:532164/1‑143 (MQ=255)                                 aaaaTTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGAAGCAGTTCTGATTTCTTGAACGACAAAAGCGCCACTCAGTAGATCCTTGCGGATCGGCAGGCGGCGATTTGCATTTTATTCTGTCCCAACTCTGGATGTTGCa                                                                                                          >  1:334253/1‑143 (MQ=255)                                    aTTGAAGCGGCGCTAGTAGACACAGAAGCAGCACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGa                                                                                                       <  2:238571/143‑1 (MQ=255)                                     ttGAAGCGGCGCTGGCAGACAAAGAAGAAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCAGCTCAGTAGATCATTGCGGAGCGGCTGGCGGCGTTTTGCTTTTTATTCTGGCTAAACACTGGATGTTTAAGGaa                                                                                                      >  2:110628/1‑143 (MQ=255)                                             gcgcTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCa                                                                                              >  1:37519/1‑143 (MQ=255)                                                  ggCAGACGAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACACAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCAGGATGTTTCATGAAGCAACTCACCAtt                                                                                         <  2:685177/143‑1 (MQ=255)                                                        cAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGc                                                                                   <  2:571516/143‑1 (MQ=255)                                                            gaagCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGa                                                                               <  1:654284/143‑1 (MQ=255)                                                             aggCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGAc                                                                              <  2:36510/141‑1 (MQ=255)                                                               gCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTGTGGATGTTTCATGAAGCAACTCACGATTCTGGGGGCGAccc                                                                            >  2:327288/1‑142 (MQ=255)                                                               gCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCg                                                                            >  1:490595/1‑143 (MQ=255)                                                               gCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCg                                                                            >  1:646472/1‑143 (MQ=255)                                                                  aacctattGCTGTTCTGATTTCTTGACCGACAAAACCGCCGCTCAGTAGATCCTTGCGGATCGGCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCt                                                                         <  2:410489/136‑1 (MQ=255)                                                                          gCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGt                                                                 <  2:366016/143‑1 (MQ=255)                                                                                        ttGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTCTCATCAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGCTGCCGCGCGCTGGa                                                   >  2:241758/1‑143 (MQ=255)                                                                                                   aaaCGCCGCTCAGTAGATCCTTGCGGATCGGCTGGCGGCGTTTTGCTTTGTATTCTGTCTCAACTCTGGGTGTTTCATGAAGCGACTCACCATTCTGGGCTAGACCGGCTGGTGTGGTTGCAGGACGCTGGTCGTGGGgcgcg                                        >  1:422667/1‑142 (MQ=255)                                                                                                      cgccgcTCAGTAGATCCTTGCGGATCGGCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGTTGCAGCACGCTGGACGTGGTGCGCCATa                                     <  1:325464/143‑1 (MQ=255)                                                                                                           cTCAGTAGATCCTTGCGGATCGGCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTTGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGTTGCAGCACGCTGGACGTGGTGCGCCATAATccc                                <  1:306247/143‑1 (MQ=255)                                                                                                           cTCAGTAGAGCCTTGCGGATCGGCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGTTGCAGCACGCTGGACGTGGTGCGCCATAATccc                                <  1:83664/143‑1 (MQ=255)                                                                                                              aGTAGATCCTTGCGGATCGGCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGTTGCAGCACGCTGGACGTGGTGCGCCATAATCCCGaa                             <  2:532164/143‑1 (MQ=255)                                                                                                                              tCGGCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCAGAATGGTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGTTGCATCACGCTGGACGTGTTGCGCCATAATCCCGAACGCGTCCGCGTAGtgg             >  1:326124/1‑141 (MQ=255)                                                                                                                                 gCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGTTGCAGCACGCTGGACGTGGTGCGCCATAATCCCGAACACTCCCGCGTCGTTgcgc          >  2:473554/1‑143 (MQ=255)                                                                                                                                         cgTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGTTGCAGCACGCTGGACGTGGTGCGCCATAATCCCGAACACTTCCGCGTAGTTGCGCTGGTggca  >  1:445045/1‑143 (MQ=255)                                                                                                                                               |                                                                                                                                         ATGTACAGAAACTGACTGATGCTGCAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCGGCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGTTGCAGCACGCTGGACGTGGTGCGCCATAATCCCGAACACTTCCGCGTAGTTGCGCTGGTGGCA  >  NC_000913/193347‑193625

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.