Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 1293040 1303238 10199 33 [0] [0] 31 tdk–[oppB] tdk, insZ, insZ, insZ, adhE, ychE, oppA, [oppB]

CAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGT  >  NC_000913/1292899‑1293168
                                                                                                                                            |                                                                                                                                 
aagATTTTTATCTGCTGCGCCCATTGTAGTAATCTCAAACGTATATTGTGGTGGTTTGCTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGgg                                                                                                                                 >  2:618104‑M2/2‑141 (MQ=255)
   aaTTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCCGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaa                                                                                                                              <  1:567935‑M2/143‑6 (MQ=255)
          aGTGCTTCTCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactcc                                                                                                                       >  1:70340‑M2/1‑131 (MQ=255)
                 cGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtactgactccaactgat                                                                                                                <  2:470437‑M2/143‑20 (MQ=255)
                           agtaATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgtt                                                                                                      >  2:628567‑M2/1‑114 (MQ=255)
                            gtaATTTCACACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttt                                                                                                     >  2:165326‑M2/1‑113 (MQ=255)
                                  tgaactttatgttgGGGTTGTTTGTTGAGGTAATAATAGAGGCGTAGATGCAGTTGTGTAATAGCCAGGAATGTAAGGAATTCTAAAGTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgtt                                                                                               >  2:642418‑M2/7‑107 (MQ=255)
                                    aaaTTTATACTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATCGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttca                                                                                             >  2:100125‑M2/1‑105 (MQ=255)
                                    aaaCTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttca                                                                                             >  1:304164‑M2/1‑105 (MQ=255)
                                      aCTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgtctccaacttattgatagtgttttatgttcaga                                                                                           >  1:192358‑M2/1‑103 (MQ=255)
                                          atatTGGGGTTGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTTTGCATTAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATGTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataat                                                                                       >  1:11003‑M2/1‑99 (MQ=255)
                                                  gtggtTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatg                                                                               >  2:542036‑M2/1‑91 (MQ=255)
                                                     gttagtgtaggtaataaTAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGGATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgact                                                                            >  1:538029‑M2/9‑88 (MQ=255)
                                                      ttgGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTAGTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactt                                                                           >  1:83238‑M2/1‑87 (MQ=255)
                                                         gttgAGGTAATAATAGAGCTTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgt                                                                        >  2:95396‑M2/1‑84 (MQ=255)
                                                          ttgAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAACTGTTCTTCAATTTGTGCCGggtaatgactcgaacttattgctagtgttttatgttcagataatgccagatgactttgtc                                                                       <  2:203197‑M2/143‑61 (MQ=255)
                                                            gAGGGAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcat                                                                     >  2:11826‑M2/1‑81 (MQ=255)
                                                             aGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatc                                                                    <  2:435114‑M2/143‑64 (MQ=255)
                                                                taataaTAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactctgtcatgcag                                                                 >  1:329379‑M2/1‑77 (MQ=255)
                                                                   taataGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctc                                                              >  1:500516‑M2/1‑74 (MQ=255)
                                                                        gagCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccg                                                         <  1:370858‑M2/143‑75 (MQ=255)
                                                                              tAAATTCAGTTGTGCAATAGACAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttg                                                   >  1:699404‑M2/1‑63 (MQ=255)
                                                                               agatgCAGTTGTGATATAGCCAGGAGTGTAAGGAATTCAAATTTGTTCTGTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagctcatgccctatgactttgtcatgcagctccaccgattttga                                                  >  2:437968‑M2/3‑62 (MQ=255)
                                                                               aaaTTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgaatttga                                                  >  2:581792‑M2/1‑62 (MQ=255)
                                                                                       ttGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgaca                                          <  2:106335‑M2/143‑90 (MQ=255)
                                                                                         gtgCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattggtagtgttttatgttcagataatgcccgatgactttgtcatgcagctccgccgattttgagaacgagagc                                        <  1:87501‑M2/143‑92 (MQ=255)
                                                                                            cAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgac                                     <  1:424851‑M2/143‑95 (MQ=255)
                                                                                                  ccAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgt                               >  2:682061‑M2/1‑43 (MQ=255)
                                                                                                         tGTAAGCAAGTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcctgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagcc                        >  1:199777‑M2/1‑36 (MQ=255)
                                                                                                            aaGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatcgtgttttatgttcagatcatgcccgatgactttgtcatgaagctccaccgattttgagaacgacagcgacttccgtcccagccgtg                     <  1:105262‑M2/143‑111 (MQ=255)
                                                                                                                           gTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttctgtcgctgccttgccaggtgccgcctca      >  2:248523‑M2/1‑18 (MQ=255)
                                                                                                                               tttATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagatt  <  2:46447‑M2/143‑130 (MQ=255)
                                                                                                                               tttATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgaatttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagacgtgccaggtgctgcttcagatt  <  2:8608‑M2/143‑130 (MQ=255)
                                                                                                                                            |                                                                                                                                 
CAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGT  >  NC_000913/1292899‑1293168

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: