New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1533706	51 (1.330)	3 (0.080)	3/272	5.5	5.6%	coding (146/570 nt)	yddH	flavin reductase like‑protein
	?	NC_000913	= 1533713	53 (1.440)					coding (139/570 nt)	yddH	flavin reductase like‑protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TTCATCACGCCCCGACACACTTCCCACCGCCCACGTCCAGTTAGTTGCTGCAACGCCCGGGATAACGATGCCAAATTTACCGTTATGTTCAATCAACTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGACGGCTGGCATGGTGTAATTCTATGGGGATGAAT  >  NC_000913/1533564‑1533843                                                                                                                                               |                                                                                                                                          ttCATCACGCCCCGACACACTTCCCACCGCCCACGTCCAGTTAGTTGCTGCAACGCCCGGGATAACGATGCCAAATTTACCGTTATGTTCAATCAACTCCCTGGTCCATGTCGATTTATCTACCACAGTCGCCACGCGTGGAg                                                                                                                                           >  2:624604/1‑143 (MQ=255)    atcaCGCCCCGACACACTTCCCACCGCCCACGTCCAGTTAGTTGCTGCAACGCCCGGGATAACGATGCCAAATTTACCGTTATGTTCAATCAACTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGtt                                                                                                                                        <  2:392374/143‑1 (MQ=255)    atcaCGCCCCGACACACTTCCCACCGCCCACGTCCAGTTAGTTGCTGCAACGCCCGGGATAACGATGCCAAATTTACCGTTATGTTCAATCAACTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGtt                                                                                                                                        <  2:198908/143‑1 (MQ=255)               acacacTTCCCACCGCCCACGTCCAGTTAGTTGCTGCAACGCCCGGGATAACGATGCCAAATTTACCGTTATGTTCAATCAACTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCAcc                                                                                                                             <  2:451256/143‑1 (MQ=255)                cacacTTCCCACCGCCCACGTCCAGTTAGTTGCTGCAACGCCCGGGCTCACGATGCCCAATTTACCGTTATGTTCAATCAACTCCCTGGTCCATGTCGCTTTCTCTACCACACTCGCGACGCCGGGAGGTTCCAACTCCACCg                                                                                                                            >  2:178985/1‑143 (MQ=255)                  cacTTCCCACCGCCCACGTCCAGTTAGTTGCTGCAACGCCCGGGATAACGATGCCAAATTTACCGTTATGTTCAATCAACTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGc                                                                                                                          >  2:26905/1‑143 (MQ=255)                     ttCCCACCGCCCACGTCCAGTTAGTTGCTGCAACGCCCGGGATAACGATGCCAAATTTACCGTTATGTTCAATCAACTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGACGTTCAAACTCCACCGGCact                                                                                                                       >  2:33470/1‑141 (MQ=255)                     ttCCCACCGCCCACGTCCAGTTAGTTGCTGCAACGCCCGGGATAACGATGCCAAATTTACCGGTATGTTCAATCAACTCCCTGCTCCATGTCGATTTCTCTACCACAATCGCCACGCGTGGAGGTTCAAACTTAACCAGCaat                                                                                                                       >  2:241323/1‑141 (MQ=255)                      tCCCACCGCCCACGTCCAGTTAGTTGCTGCAACGCCCGGGATAACGATGCCAAATTTACCGTTATGTTCAATCAACTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCACTg                                                                                                                      >  1:346129/1‑143 (MQ=255)                       cccACCGCCCACGTCCAGTTAGTTGCTGCAACACCCGGGATAACGATGCCACATTTACCGTTATGTTCAATCAACTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGa                                                                                                                     >  1:353671/1‑143 (MQ=255)                        ccACCGCCTCCGTCCAGTTAGTTGCTGCATCGCCCGGGATAACGATGCCAAATTTACCGTTATGTTCAATCACCTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGAc                                                                                                                    <  2:651088/143‑1 (MQ=255)                         cACCGCCCACGTCCAGTTAGTTGCTGCAACGCCCGGGATAACGATGCCAAATTTACCGTTATGTTCAATCAACTCCCTGGTCCATGTCGATTTATATATCACGATCACCACGCGTGGAGGTTCACACTCCACCGGCATCGAcc                                                                                                                   >  1:138997/1‑143 (MQ=255)                         cACCGCCCACGTCCAGTTAGTTGCTGCAACGCCCGGGATAACGACGCCAAATTTACCGTTATGTGCAATCAACTCCCTGGTCCACGTCGAATTATCTACCCCAATCGCCACCCGCGGCGGTCCATACTCCACCCGCACTGAcc                                                                                                                   >  1:315630/1‑143 (MQ=255)                                  cGTCCAGTTAGTTGCTGCAGCGCCCGGGATAACGAGGCCAAATTTACCGTTATGTTCAATCAACTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAg                                                                                                          <  1:123367/143‑1 (MQ=255)                                      cAGTTAGTTGCTGCAACGCCCGGGATAACGATGCCACCTTTACCGTTATGCTCGATCAACTCCCTGGTCCCTGTCCCTTTTTCTACCACAACCTCCACGCTCTGAGGCTCCAACCCAACCGGCCTTGACCACGccacatccct                                                                                                      >  2:641662/1‑134 (MQ=255)                                             ttGCTGCAACGTCCGGGATAACGAGGCCGTATTTACCGTGATGTTCAATCAGCTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTa                                                                                               <  1:55515/143‑1 (MQ=255)                                                     aCGCCCGGGGTAACGCTGCCAAATTTACCGTTAGGTTCAATGAGCGCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCGGCAGCCATAATGTTACGCCGCTg                                                                                       <  2:290369/143‑1 (MQ=255)                                                           tgcaTAACGATGCCAAATTTACCGTTATGTTCAATCAACTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTg                                                                                 <  1:27681/140‑1 (MQ=255)                                                                aaCGATGCCAAATTTACCGTTATGTTCAATCAACTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCAt                                                                            >  1:25158/1‑143 (MQ=255)                                                                 ccgttgccacttctACCGTTATGTTCACTCACCTCCCTGGTCCATCTCGATTTATCTCCCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATc                                                                           <  1:612643/130‑1 (MQ=255)                                                                  cGATGCCAAATTGACCGTTATGTTCAATCAACTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGGGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCg                                                                          <  1:608218/143‑1 (MQ=255)                                                                        cAAATTTACCGTTATGTTCAATCAACTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTg                                                                    >  2:223470/1‑143 (MQ=255)                                                                        cAAACTTACCGTTATGTTCCATCAACTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTg                                                                    <  2:138416/143‑1 (MQ=255)                                                                         aaaTTTACCGTTATGTTCAATCAACTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTgg                                                                   >  2:580408/1‑143 (MQ=255)                                                                          aaTCTACCGTGATGCTCAATCGACTCCCTGCTCCATGTCGATTTACCTACCACAATCGCCACGCGTGGAGTTTCACACGCCACCGGCCTTCACCAACCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGt                                                                  <  2:254220/143‑1 (MQ=255)                                                                           agttgcggTTATGTTCAATCACCTCCCTGGTCCATGTCGCTTTATCTACCACCATCGCCACGCGTGGAGGTTCAAACTCCGCCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTg                                                                 <  1:634502/136‑1 (MQ=255)                                                                            cttACCGTTCTGTTCATTCAACTCCCTCGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTCCAAACGCCACCGGCAGTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGa                                                                <  2:207445/142‑1 (MQ=255)                                                                             ttACCGTTATGTTCACTCAACTCCCGGTTCCATGTCGAGTTATCTACCACAAGCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGAt                                                               <  1:456363/143‑1 (MQ=255)                                                                             ttACCGTCATGTTCAATCAGCTCCCTGGTCCAGGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACGCCACCGGCATTGACCACGCTGAAGTCACTATATTTTGCGGCTTGGATTGCTCATCGAAACTGGTGAt                                                               <  2:642283/143‑1 (MQ=255)                                                                                ccGTTATGTTCAATCAACTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCGAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCaa                                                            <  2:353671/143‑1 (MQ=255)                                                                                ccGTTATGTTCAATCAACTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACAGGCATAAACCAAGCTTTAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCaa                                                            >  2:491394/1‑143 (MQ=255)                                                                                        ttCCATCAACTCCCTGGTCCATGTCGATTTATCTACCACAAACGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGCTTGCTCATCGCAACTGGTGATCAAGACCGGTg                                                    >  1:589190/1‑143 (MQ=255)                                                                                          caatcacCTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTggg                                                  <  2:570700/143‑1 (MQ=255)                                                                                           aatcaaCTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGCTCAAGACCGTTGGGc                                                 >  1:233204/1‑143 (MQ=255)                                                                                            atcaaCTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATCGCTCATCGAAACTGGTGCTCCAAAGCATTGGGcc                                                >  1:421224/1‑143 (MQ=255)                                                                                              cggcTCCCTCGTCGCGGTCGATTGTTCTACCACCATCGCCTCGCGTGGAGGTTCAAACTGCACCGGCATTGACCAGGCTGCAGCTATAATGTTACGCCGCTGGGATTGCTCATCGTAACTGGTGATCAAGACCGTTGGGCCAt                                              <  1:198077/140‑1 (MQ=255)                                                                                               aacgtccTGGGCCATGTCGATGTACCTACCACAATCGCCACGCGTCGAGGTTCAAACTCCACCGGGTTTGACCAGGCTGCAGCCATAATGTGAGGCCGCTGGGAGTGCTCAGCGAAACTGGTGATCAAGACCGTTGGGCCATg                                             <  1:94719/138‑1 (MQ=255)                                                                                                aCTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTCCGCCGCTGGGATTGCTCATCGAAACCGATGATCCCGACCggctggccacca                                            >  1:611843/1‑132 (MQ=255)                                                                                                  tCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGAtt                                          <  2:436151/143‑1 (MQ=255)                                                                                                      cggTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAAc                                      <  2:78875/142‑1 (MQ=255)                                                                                                               tCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGAAGGCTg                             >  2:131625/1‑143 (MQ=255)                                                                                                                    ttATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGACGGCTGGCATg                        <  2:25158/143‑1 (MQ=255)                                                                                                                         tACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGACTTAACAGACGGCTGGCATGGAGTa                   >  2:466178/1‑143 (MQ=255)                                                                                                                          aCCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGACGGCTGGCATGGTGTaa                  <  1:26905/143‑1 (MQ=255)                                                                                                                            cacaATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGACGGCTGGCATGGTGTAAtt                >  2:101688/1‑143 (MQ=255)                                                                                                                            cacaATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGATACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGACGGCTGGCATGGTGTAAtg                >  2:171562/1‑142 (MQ=255)                                                                                                                                 tCGCCACCCGTGGACGTCCAAACCCCACCGGCATTGGCCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGACGGCTGGCATGGTGTAATTCTATg           <  2:655638/143‑1 (MQ=255)                                                                                                                                    ccccgcgTGGGGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGACGGCTGGCATGGTGTAATTCTATgggg        <  1:624604/140‑1 (MQ=255)                                                                                                                                    ccACGCGTGGAGGTTCAAACTCCACCGGCATGGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGACGGCTGGCATGGTGTAATTCTATgggg        <  2:474123/143‑1 (MQ=255)                                                                                                                                        gcgTGGAGGTTCAAACCCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGACGGCTGGCATGGTGTAATTCTATGGGGATGa    <  2:138997/143‑1 (MQ=255)                                                                                                                                        gcgTGGACGTTTATTCTCCACCGGTATTGTCCGGTCTGCAGCAATAACGTTATGCCGCTGGTATTGCTCATCGAAACTGGTGAACAAGACCGTTGGGTTATGATTTAACAGACGGCTGGCATGGTGTAATTCTATGGGGATGa    <  1:251574/143‑1 (MQ=255)                                                                                                                                          gTGGAGGTTCAGACTCCACCGGCATTGGCCGGGCTGCAGCCATACTGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGCCCGTTGGGCCATGATTTAACAGACGGCTGGCATGGTGTAATTCTATGGGGATGAAt  <  2:58930/143‑1 (MQ=255)                                                                                                                                               |                                                                                                                                          TTCATCACGCCCCGACACACTTCCCACCGCCCACGTCCAGTTAGTTGCTGCAACGCCCGGGATAACGATGCCAAATTTACCGTTATGTTCAATCAACTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGACGGCTGGCATGGTGTAATTCTATGGGGATGAAT  >  NC_000913/1533564‑1533843

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.