New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1512410 =	39 (1.020)	3 (0.080)	3/276	5.5	7.3%	coding (757/1146 nt)	ydcS	putative ABC transporter periplasmic binding protein
	?	NC_000913	1512451 =	38 (1.020)					coding (798/1146 nt)	ydcS	putative ABC transporter periplasmic binding protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TGCTGAAAGTGCTGCGCGCTCAACACAGTTTGATCCATCGCTACTGGCATGACACTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGCCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGAAACATCCGGTTTGCGCCTACAAATGGATGAACTGGTCATTAACGCCAAAAGTGCAGGGC  >  NC_000913/1512315‑1512592                                                                                                                                         |                                                                                                                                              tGCCGAAAGTGCTGCGCGCTCAACACAGTTTGAGCCATCGCTACTGGCATGACACTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGc                                                                                                                                         <  2:256410/143‑1 (MQ=255)     gAAGGTGCTGCGCGCTCAACACAGTTTGTTCCATTACTTCTTTTATGACACTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGCCAGc                                                                                                                                     <  1:137939/143‑1 (MQ=255)           gctgcGCGCTCAACACAGTTTGATCCATCGCTACTGGCATGACACTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGCAAGACGAAGGCCAGCCTGTTg                                                                                                                               <  1:372160/143‑1 (MQ=255)                    tCAACACAGTTTGATCCATCGCTACTGGCATGACACTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGACCTAAAAGCAGAAGACCAGCATGTTGCTACCGttt                                                                                                                      >  2:76543/1‑143 (MQ=255)                       acacAGTTTGATCCATCGCTACTGGCATGACACTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCACGCCAACGCCCTGAAAGCCGAACGCCACCCTGTTGCTCCCGTTTTcc                                                                                                                   >  2:68824/1‑143 (MQ=255)                         acaGTTTGGTCCATCGGTACTGGCATGACACTACCGGGCAAATGGGCGATTTGAAAAACGAGGGTGTGGCTGCTTCCAGTGCCTGGCCCTAGCAGGCCAACGCCCTGAAAGCGGAAGGCCAGCCTGTTGCTACCGTTTTCCCg                                                                                                                 <  2:152266/143‑1 (MQ=255)                         acaGTTTGATCCATCGCTACTGGCATGACACTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCACTGAAAGGCGAAGGCGAGCGTGCCGCTACGGCTCTCCCg                                                                                                                 >  1:518218/1‑143 (MQ=255)                                gATCCATCGCTACTGGCATGACACTACCGTGCAATTGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGCCAGCCTGTTGCTACCGTTTTCCCGAaggagg                                                                                                          <  1:356082/143‑1 (MQ=255)                                 aTCCATCGCTACTGGCATGACACTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGCCAGCCTGTTGCTACCGTTTTCCCGAAGGAggg                                                                                                         <  2:82152/143‑1 (MQ=255)                                     aTCGCTACTGGCATGACACTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGACCCTAGCAGGCCAACGCCCTGAAAGCCGAAGGCCAGCCGGTTGCCACCGCTTTCCCGAAGGAAGGTGtt                                                                                                     >  1:95418/1‑143 (MQ=255)                                         cTACTGGCATGACGCTACCGTGCCAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGCCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCg                                                                                                 <  1:15642/143‑1 (MQ=255)                                             tGGCATGGTACGACCGGGCAAATGCGCGATTTGAAAGACGAGGGTGTGGTTGCTTCCGGTGCCTGGCCCTCTCAGGCCAACGCCCTGAAAGCCGAAGGCCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTg                                                                                             <  1:255692/143‑1 (MQ=255)                                             tGGCATGACACTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGCTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGCCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTg                                                                                             <  2:563874/143‑1 (MQ=255)                                              ggcctcacacTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGCCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTgg                                                                                            <  2:613683/137‑1 (MQ=255)                                               gCATGACACTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGCCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGGTACCGGTTggg                                                                                           >  1:519163/1‑143 (MQ=255)                                                      gcggccGTGCAAACGACCGATTTCAAAAACGGGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGCCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATac                                                                                    <  1:438125/139‑1 (MQ=255)                                                      acgaCCGGGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCCGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGCCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATac                                                                                    <  2:287708/140‑1 (MQ=255)                                                          ccGTGCAAATGAGCGCTTTCAAAACCGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGCCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATaccacc                                                                                <  1:66797/143‑1 (MQ=255)                                                                aaaTGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGCCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCAtgctg                                                                          <  2:633716/143‑1 (MQ=255)                                                                    gAGCGATTTCAAAAACGAGGGTGGGGTTGCTGCCAGGGCCGGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGCCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATa                                                                      <  2:9143/143‑1 (MQ=255)                                                                    gAGCGATTTC‑AAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGCCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGAGTGGTCTGTTGGGATGATACCACCATGCTGCATag                                                                     >  1:40010/1‑143 (MQ=255)                                                                         aTTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGCCAGCCTGTTGCGACCGTCTCCCCGACGGAGGGTGTTACCGGTTGGGCTGCTACCACCCTGCTGCATcccgaa                                                                 >  1:6729/1‑143 (MQ=255)                                                                           ttCAAAGAGGTGGGTGTGGTTGTTTCCAGTGCCTGGCCCTAGCAGGCCAACGCCCTGATAGCCGAAGGCCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATTCCACCATGCTGCATagcgaagc                                                               <  1:373615/143‑1 (MQ=255)                                                                            tCAAAAACGAGGGTGTGGTTGCTTCCAGTGACTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGACCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTCACCGGCTGGGCTGATACCACCATGCTGCATcgcgaagag                                                              >  1:92177/1‑141 (MQ=255)                                                                              aaaaaCGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGCCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAgcgaagcgaa                                                            <  1:216257/143‑1 (MQ=255)                                                                              aaaaaCGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGCCAGCCTGTTGCTACCGTGTTCCCGACGGAGGGGGTTACCGGTTGGGCTGATACCACCATGCGGCATagcgaagcgca                                                            >  1:413935/1‑141 (MQ=255)                                                                                         tgggtgtGCTTCTGGTGCCTGTCGCTAAGTGGCTAACGCCCTGAGAGCCTAAGGCCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGAAACATCCGGttt                                                 <  1:108234/137‑1 (MQ=255)                                                                                           tgGTTGCTGCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGCCAGCCTGTTGCTACCGATTTCCCGAAGGAGGGGATACCCGGTTGGGCTCATACCACCCTGCAGCGAAGCGAACCGAAAGAACCggcccgc                                               >  1:129597/1‑138 (MQ=255)                                                                                             gtcgcccccAGGGGCTGGCCCTATCAGGCGAACGCCCCGAAAGCCGAAGGCCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGAAACATCCGGTTTgcgc                                             <  1:468760/136‑1 (MQ=255)                                                                                                  ttCCAGTGCCTGGCCCTATCAGGCCAACGCACTGAAAGCCGAAGGCAAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATGCCACCATGCTGCATAGCGAAGCGAAACATCCGGTCGGCGCCTACa                                        >  2:220053/1‑143 (MQ=255)                                                                                                     ctttGCCTGGCCCTATCAGGCCAACCGCCTGAAAGCCGAAGGCCCGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGAAACATCCGGTTTGCGCCTACAAAt                                     <  1:227448/140‑1 (MQ=255)                                                                                                        tGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGCCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGAAACATCCGGTTTGCGCCTACAAATGGa                                  <  2:642681/143‑1 (MQ=255)                                                                                                             ggCCCTATCCGGCCCACGCCCTCAAAGCCGAAGCCCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGAAACATCCGGTTTGCGCCTACAAATGGATGAAc                             <  2:137772/143‑1 (MQ=255)                                                                                                               cccTATCAGTCCAACGCCCTGAAAGCCGAAGGCCAGCCTGTTGCTACCGGTTTCCCGAATGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCGTAGCGCAGCGACACATCCGTTTTGCGCCTGCAAAGGGATATACTg                           >  2:105632/1‑143 (MQ=255)                                                                                                                 cTATCAGGCCAACGCCCTGAAAGCCGAAGGCCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGAAACATCCGGTTTGCGCCTACAAATGGATGAACTGGt                         >  1:342782/1‑143 (MQ=255)                                                                                                                   aTCAGGCCAACGCCCTGAAAGCCGAAGGCCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGAAACATCCGGTTTGCGCCTACAAATGGATGAACTGGTCa                       <  2:628943/143‑1 (MQ=255)                                                                                                                          cAACGCCCTGAAAGCCGAAGGCCTGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGAGAAAAATCCCGGGTGCGACTACATAGTGATGAACTGGTCATTAACGc                >  2:636537/1‑143 (MQ=255)                                                                                                                               cccTGAATGCCCAAGGCCACCCTGTTTCTACCTTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGAAACATCCGGTTTGCGCCTACAAATGGATGAACTGGTCATTAACGCCaaaa           <  2:630272/143‑1 (MQ=255)                                                                                                                                   ggcaggcGAATGCCAGCCTGTTGGTGCCGTTTTCCCGAAGGATGTTGTTACGGGTTGGGCTGATACCACCATGCTGCATAGCTAAGCGAAGCATTCGGTTTGCGCCTACAAATGGATGAACTGGTCATTAACGCCAAAAGTGc       <  1:457105/137‑1 (MQ=255)                                                                                                                                        ccGAAGGCCAGCCTGTTGCTACCGTTTTCCCCAAGGAGGGTGTTACCGGTTGCGCTGATACCACCCTGCCGCATAGCGAAGCGCAACATCCGCTTTGCGCCCACAAATGCCTGAACTGGTCATCACCGCCaccccagccgacc  >  1:508518/1‑131 (MQ=255)                                                                                                                                         |                                                                                                                                              TGCTGAAAGTGCTGCGCGCTCAACACAGTTTGATCCATCGCTACTGGCATGACACTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGCCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGAAACATCCGGTTTGCGCCTACAAATGGATGAACTGGTCATTAACGCCAAAAGTGCAGGGC  >  NC_000913/1512315‑1512592

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.