| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1979486 = | 0 (0.000) | 49 (0.530) | 32/500 | NT | 100% | intergenic (‑271/‑267) | insA/uspC | IS1 repressor TnpA/universal stress protein |
| ? | NC_000913 | 2101749 = | NA (NA) | intergenic (‑5/+146) | wbbL/insH1 | pseudogene, lipopolysaccharide biosynthesis protein/IS5 transposase and trans‑activator | |||||
CTTTTTAAGTGCCATCTGAAGGCTTTTGAAAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAACATAATGAAGTCTGACACCAGCCAGGCTAAGCCTCAAGCACAGGTCAATATCTTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCA‑TTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGA‑CGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTG‑AATAACATCGCCAGTTGGTTATCGTTTTTCAGCAACCCCTTGTATCTGGCTTTCACGAAGC > NC_000913/2101475‑2102016 | cTTTTTAAGTGCCATCTGAAGGCTTTTGAAAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAACATAATGAAGTCTGACACCAGCCAGGCTAAGCCTCAAGCACAGGTCAATATCTTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTaag > 2:648583/1‑275 (MQ=255) cGATTGTCAAGATGGGCATAAAGTATCGCATGAAAAGCGGGAACATAATGAAGTCTGACACCAGCCAGGCTAAGCCTCAAGCACAGGTCAATATCTTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACt < 1:770243/275‑1 (MQ=255) aTTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAACATAATGAAGTCTGACACCAGCCAGGCTAAGCCTCAAGCACAGGTCAATATCTTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCa > 2:148576/1‑275 (MQ=255) tGTCATGATGAGCATAATGTATCGCATGAAAAGCGTGAACATAATGAAGTCTGACACCAACCAGGCTAAGCCTCAAGCACATGTCAATATCTTCACAGTACATAAAGTAACCTTAATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCAGAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCa < 2:801930/273‑1 (MQ=255) tgaGCATAATGTATCGCATGAAAAGCGGGAACATAATGAAGTCTGACACCAGCCAGGCTAAGCCTCAAGCACAGGTCAATATCTTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAACAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGtc‑atttcat > 2:171560/1‑275 (MQ=255) cATAATGTATCGCATGAAAAGCGGGAACATAATGAAGTCTGACACCAGCCAGGCTAAGCCTCAAGCACAGGTCAATATCTTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATttct > 2:588009/1‑275 (MQ=255) cATAATGTATCGCATGAAAAGCGGGAACATAATGAAGTCTGACACCAGCCAGGCTAAGCCTCAAGCACAGGTCAATATCTTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTAACAGAATAGATACTTTCTTTAGGACTTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTATTCTGGGCTGACTCAGTA‑ATTTCATttct > 1:448639/1‑275 (MQ=255) cGCATGAAAAGCGGGAACATAATGAAGTCTGACACCAGCCAGGCTAAGCCTCAAGCACAGGTCAATATCTTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGCCTCCGTC‑ATTTCATTTCTTCATGTTTg > 1:600834/1‑274 (MQ=255) cGCATGAAAAGCGGGAACATAATGAAGTCTGACACCAGCCAGGCTAAGCCTCAAGCACAGGTCAATATCTTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTg > 2:22434/1‑274 (MQ=255) gAAAAGCGGGAACATAATGAAGTCTGACACCAGCCAGGCTAAGCCTCAAGCACAGGTCAATATCTTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGAGCCGa > 2:219636/1‑275 (MQ=255) aTGAAGTCTGACACCAGCCAGGCTAAGCCTCAAGCACAGGTCAATATCTTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTaaa < 2:284299/275‑1 (MQ=255) gACACCAGCCAGGCTAAGCCTCAAGCACAGGTCAATATCTTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGaa < 1:148576/275‑1 (MQ=255) gACACCAGCCAGGCTAAGCCTCAAGCACAGGTCAATATCTTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGaa < 1:22434/275‑1 (MQ=255) gACACCAGCCAGGCTAAGCCTCAAGCACAGGTCAATATCTTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGaa < 2:162687/275‑1 (MQ=255) gACACCAGCCAGGCTAAGCCTCAAGCACAGGTCAATATCTTCACAGTACAGAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCGTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGaa < 2:370868/275‑1 (MQ=255) gccagGCTAAGCCTCAAGCACAGGTCAATATCTTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGc > 1:589111/1‑273 (MQ=255) gCCTCAAGCACAGGTCAATATCTTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATACGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCg > 1:498091/1‑275 (MQ=255) ccTCAAGCACAGGTCAATATCTTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGt > 1:536614/1‑275 (MQ=255) aaGCACAGGTCAATATCTTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTCTTAAGGACGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAACTGCCTTGAATCAGCCTATTTCGACCGTttct > 2:29795/1‑275 (MQ=255) tCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACCAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCA‑TTTAAGGCGTTa > 1:256983/1‑275 (MQ=255) cATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCA‑TTTAAGGCGTTATCCCCAGt > 2:106840/1‑275 (MQ=255) aTAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCCAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGAGCCGCTTTTTTCTCCCGTAACTGCTTTGAATCAGCCTCTTTAGACCGTTTCTTCGCAC‑TTTAAGGCGTTATCCCCAGtt > 1:153089/1‑275 (MQ=255) aaCCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCACTCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCAGTAAATGCCTTGAATCAGACTATTTAGACCGTTTCTTAGCCA‑TTTAAGGCGTTATCCCAAGTTTTTa > 2:687667/1‑272 (MQ=255) aaCCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGCATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGCTGGAGCCGATTTTTTCTCCCCTAAATGCCTTGAATCCGACTATTTAGACCGTTTCTTAGCCA‑TTTAAGGCATTGTCCCCATTTTTTa > 1:347973/1‑272 (MQ=25) aaCCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCA‑TTTAAGGCGTTAt > 2:424665/1‑260 (MQ=255) ccTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCA‑TTTAAGGCGTTATCCCCAGTTTTTAGTgag < 1:219636/275‑1 (MQ=255) ccTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTATATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCA‑TTTAAGGCGTTATCCCCAGTTTTTAGTgag > 1:266872/1‑275 (MQ=255) ttGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCA‑TTTAAGGCGTTATcccc < 1:424664/260‑1 (MQ=255) aTCGAAGCCATTTACACGCACAAAATCTGAAAATCGTACCTGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCCTGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTGGAATCAGCCTATTTAGACCGTTTCTTCGCCA‑TTTAAGGCGTTATCCCCAGTTTTTAGTGAGAtctc < 2:321125/275‑1 (MQ=255) aTCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTGCTTCGCAA‑TTTAAGGCGTTATCCCCAGTTTTTAGTGAGAtct > 1:552946/1‑274 (MQ=255) cGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCA‑TTTAAGGCGTTATCCCCAGTTTTTAGTGAGAtctctc > 2:523347/1‑275 (MQ=255) aGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCA‑TTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCa > 2:107969/1‑275 (MQ=255) ccATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCA‑TTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCa < 1:588008/273‑1 (MQ=255) tACACGCACAAAATCTGAAAACCGTACCAGCATAAATGAACCTGCGAACCAATCAACAACCTTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCA‑TTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGA‑CGt < 2:29243/275‑1 (MQ=255) acaAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCA‑TTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGA‑CGTATCAttt > 2:183372/1‑275 (MQ=255) aaaCTTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCA‑TTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGA‑CGTATCATTTGGTCCGCCCGaa < 2:626492/275‑1 (MQ=255) aaaCGTAACAGCATAAATTATCCTGCGCACCAATCAACAACCGTGTCAGAATCAATACTTGCTTTAGGAATTTTTGTTTTATTAAGGCAGGTGCGACTAAGC‑GGTGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCA‑TTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGA‑CGTATCATTTGGTCCGCCCGaa < 1:127038/275‑1 (MQ=255) aTAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCA‑TTTAAGGCGTTATCCCCAGTTTTTAGTGGGATCTCTCCCACTGA‑CGTATCATTTGGTCCGCCCGAAACAGGTTGGCCa < 2:498092/275‑1 (MQ=255) tAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGTAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCA‑TTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGA‑CGTATCATTTGGTCCGCCCGAAACAGGTTGGCCa < 1:523346/274‑1 (MQ=255) tAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTCCTTCGCCA‑TTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGA‑CGTATCATTTGGTCCGCCCGAAACAGGTTGGCCa > 1:46249/1‑274 (MQ=255) aaTGATCCTGCGCACCAATCAATAACCGTATCACAATAGATCCTTTCTCTAGGAATTTTTGTATTATTAAGGAATGTGCGAATAAGC‑GGGGATATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGAGTCGATTTATTCACCCGTAAATGCCTTGAATCAGCCTATTTAGATCGTTTCTTCGCCA‑TTCAAGCCGTTATCCCCAGTTTTTAGTGTGATCTCTCCCACTCT‑CGTTTCTTTTGGTTCCCCCACAACAGGTTGGCCAGc > 1:502760/1‑274 (MQ=17) tCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTGTCTTTAGGAATGTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGGGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCA‑TTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGA‑CGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTG‑AAt < 2:448640/275‑1 (MQ=255) ccTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTGGCCA‑TTTAAGGCGTTACCCCCAGTTTTTAGTTAGATCCCTCACACTGA‑CGTATCATTGAGTCCGCCCGAAACAGGTTGGCCAGCGTG‑AATa > 2:423838/1‑275 (MQ=255) ccTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCA‑TTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCAACTGA‑CGTCTCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTG‑AATa > 2:454933/1‑275 (MQ=255) cTGCGCACCAATCAACAACCGTATAAGAATAGATACTTTCTTTAGGAATTTATGTTTTATTAAGGAAGGTGCGACTAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTGGATCCGAGTTTTTCTCCCGTCAATGCCTTGAATCAGCCGATTTACACCGTCTCTTCGCCA‑TTTAAGGCGTTATCCCCAGTTTTTAGAGAGATCTCTCCCACTTA‑CGTAACATTTGGTCCGCCTGAACCAGGTCGGCCAACGTG‑AATaa > 1:243053/1‑275 (MQ=17) cgcACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCA‑TTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGA‑CGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTG‑AATAACAt > 2:115798/1‑275 (MQ=255) cgcACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGCTTGAGCCGATTTTTTCTCCCCTAAATGCCTTGAATCAGCCTATTTAGACCGTCTCTTCGCCA‑TTTAAGGCGTTATCCCAAGTTTTTAGTGAGATCTCTCCCACTAA‑CGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTG‑AATAACa > 1:253492/1‑274 (MQ=255) cgcACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCCTCTCGGCTGACTCAGTC‑ATTTCCTTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCA‑TTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCTACTGA‑CGTATCATTTGGTCCGCCCGCACACGGTTCGCCAGCGTG‑AATAACAt > 2:801342/1‑275 (MQ=255) cAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCA‑TTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGA‑CGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTG‑AATAACATCGcct > 1:368524/1‑274 (MQ=255) ccGTATCAGTATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTACATGCCTTGAATCAGCCTCTTTAGACCGTTTCTTCGCCT‑TTTAAGGCGTTATCCCCAGTTTTTAGTGCGATCTCTCCCCCTGA‑CGTATCATTTGGTCCGCCCGAAACAGGTTGGCCCGCGTG‑AATCCCATCGCCCGTTGGTTAt > 2:132701/1‑274 (MQ=14) ccGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCA‑TTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGA‑CGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTG‑AATAACATCGCCAGTTGGTTAt > 2:623442/1‑274 (MQ=255) tATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCA‑TTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGA‑CGTATCATTTGGTCCGCCCGAAACAGGTTGGCCACCGTG‑AATAACATCGCCAGTTGGTTATCGtt > 1:703481/1‑275 (MQ=255) tATCAGAATAGATACTTTCCTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCA‑TTTAAGGCGTTACCCCCAGTTTTTAGTGAGATCTCTCCCACTGA‑CGTATCATTTGGTCCGCACGAAACAGGTTGGCCAGGGTG‑AATCACATCGCCAGTTGGTTGTCGtt > 1:805855/1‑275 (MQ=255) aTAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCA‑TTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGA‑CGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTG‑AATAACATCGCCAGTTGGTTATCGTTTTTc > 1:414866/1‑272 (MQ=255) tAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCA‑TTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGA‑CGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTG‑AATAACATCGCCAGTTGGTTATCGTTTTTCAGCa > 2:811685/1‑275 (MQ=255) tAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCA‑TTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGA‑CGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTG‑AATAACATCGCCAGTTGGTTATCGTTTTTCAGCa > 1:615804/1‑275 (MQ=255) aTACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGGAAATCTTTTTCGGCTG‑CTTAGGCAATTTCTTTTCTCAAGGTTTAGGCCGTTTTTTTTTCCCTTAAAT‑CCTTTAATCAGCCTTTTTAAGCCGGTTTTTTGCCATTTTAAGGGGTAATCCCCATTTTTTA‑TGGAATTCCTCCCAATTACCGAATCTTTGGGTCC‑CCCGAAACCGGTTTGGCAACCTGAAATACCTTCCCAAGTGGGTTACGGTTTTTC‑GCAAcc > 1:516515/1‑275 (MQ=255) aTACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCA‑TTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGA‑CGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTG‑AATAACATCGCCAGTTGGTTATCGTTTTTCAGCAAcc > 2:181669/1‑275 (MQ=255) ttctttAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCA‑TTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGA‑CGTATCATTTGGTCCGcc > 1:803239/1‑212 (MQ=255) ttctttAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCA‑TTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGA‑CGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTG‑ACTAACATCGCCAGTTGGTTATCGTTTTTCAGCAACCCCTTg > 1:524471/1‑275 (MQ=39) ttctttAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCA‑TTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGA‑CGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTG‑AATAACATCGCCAGTTGGTTATCGTTTTTCAGCAACCCCTTg > 2:597963/1‑275 (MQ=39) ttctttAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCA‑TTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGA‑CGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTG‑AATAACATCGCCAGTTGGTTATCGTTTTTCAGCAACCCCTTg > 1:131154/1‑275 (MQ=39) ttctttAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCA‑TTTAAGGCGTTACCCCCAGTTTTTAGTACGATCTCTCCCACTGA‑CGTATCATTTGGTCCGCCCGCAACAGGTTGGCCAGCGTG‑AATAACATCCCCAGTTGGTTCGCGTTTTTCAGCCACCCCtt > 1:3580/1‑274 (MQ=255) ttctttAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGACTATTTAGACCGTTTCTTCGCCA‑TTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGA‑CGTATCATTTGGTCCGCCCGAAACAGGTTGTCCAGCGTG‑ACTAACATCGCCAGTTGGTTATCGTTTTTCAGCAACCCCTTg > 2:125631/1‑275 (MQ=255) ttAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCA‑TTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGA‑CGTATCATTTGGTCCGCCCGaa < 2:803240/212‑1 (MQ=40) tAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCA‑TTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGA‑CGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTG‑AATAACATCGCCTGTTGGTTATCGTTTTTCAGCAACCCCTTGTAt < 2:368525/273‑1 (MQ=37) tAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCA‑TTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGA‑CGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTG‑AATAACATCGCCAGTTGGTTATCGTTTTTCAGCAACCCCTTGTATc > 2:728206/1‑274 (MQ=37) tttGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTTTAGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGTGCCCATTTTTTCTCCCGTAAATGCCTTGAACCAGCCTATTTCGACCGTTTCTTCGCCA‑TTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGA‑CGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTG‑AATAACATCGCCAGTTGGTTATCGTTTTTCAGCAACCCCTTGTATCTGGCTTTCa < 2:153089/275‑1 (MQ=255) tttGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCA‑TTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGA‑CGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTG‑AATAACATCGCCAGTTGGTTATCGTTTTTCAGCAACCCCTTGTATCTGGCTTTCa < 1:811684/275‑1 (MQ=33) tttGTTTATTTAAGGAGGGTCGGATTAGGG‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCA‑TTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGA‑CGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTG‑AATAACATCGCCAGTTGGTTATCGTTTTTCAGCAACCCCTTGTATCTGGCTTTCa < 2:516516/275‑1 (MQ=2) ttattaAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCA‑TTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGA‑CGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTG‑AATAACATCGCCAGTTGGTTATCGTTTTTCAGCAACCCCTTGTATCTGGCTTTCACGAAGc > 1:680170/1‑275 (MQ=31) | CTTTTTAAGTGCCATCTGAAGGCTTTTGAAAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAACATAATGAAGTCTGACACCAGCCAGGCTAAGCCTCAAGCACAGGTCAATATCTTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGC‑GGGGAAATTCTTCTCGGCTGACTCAGTC‑ATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCA‑TTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGA‑CGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTG‑AATAACATCGCCAGTTGGTTATCGTTTTTCAGCAACCCCTTGTATCTGGCTTTCACGAAGC > NC_000913/2101475‑2102016 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |