| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,466,579 | G→C | 10.8% | pseudogene (1188/2513 nt) | ydbA → | pseudogene, autotransporter homolog, interrupted by IS2 and IS30 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,466,579 | 0 | G | C | 10.8% | 176.4 / 6.8 | 70 | pseudogene (1188/2513 nt) | ydbA | pseudogene, autotransporter homolog, interrupted by IS2 and IS30 |
| Reads supporting (aligned to +/- strand): ref base G (35/25); new base C (6/3); total (41/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.29e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGT > NC_000913/1466311‑1466841 | ccATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGgttgtt < 1:753231/275‑1 (MQ=255) cGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCACCGGTATCCAGGTTTACGGCGACCCGGCCCTTGTTAACAACCAAg > 1:378188/1‑275 (MQ=255) ggTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCCAGGATTCCACCGGCACGCAAATCAACGGTAATAACGGTCAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGGCACGGTATTGATATCACCGGCGACCGCGCCACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGTAGCCCATCGGTATCCGGGTTGACGGCGACCAGGCCAGCGTTAACAACGACgg > 1:343955/1‑275 (MQ=11) ggTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAg > 1:94034/1‑274 (MQ=255) ggTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGCCACCGATCCGGAGTTCATCGGTACCCCGGTAGCCGGCGCACAGGCGGTTGTGAACAACGaac > 2:95918/1‑273 (MQ=17) gcaccggcaccCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCga > 2:396621/1‑274 (MQ=255) gcaccggcaccCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCga < 2:94034/274‑1 (MQ=255) gaacgccgcttAATCGTGATGGCGGCACGGCAAACAACAACGGAAAACCCACCGTTGACGGCAAGGGTTCCACCGGTACGGAAATTAACGGTAATAAAGGAAAAGTTATGCAGGACGTCGATCTGGATGTAATCGGCGGAGGGCAGGGTATAGATATCACCGGCGACAGAGAAACGGTGGATAACAAGGGAAACGTGACCGTCAGCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGcc < 1:193510/266‑1 (MQ=255) aTTAATGTTGATGACGCCACGGCAAACAACAACGGAAAAACCACCGTTGACGGCAAGGATTCAACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGCTGTCAGCGGCGGCGGTCACGGTATTGCTATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGAACGTCACCGAACCGGAGTCCATCGGTATACTGGTTGCCGGCGACCCGGCGCGTGGTAACAACGCAGGCGAGAGAGCCATCACCa > 2:875989/1‑274 (MQ=17) atgaCGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCAACGGCGACAGCGCAACGGTGGATAACAAGGGAACCATGACCGTCACCGATCCGGCGCCCCTCGGTATCCAGGTTGACGGCGACCAGGCCATTGTTAACAACGAAGGCGAGAGCACCATCACCAACGGTgtctcc > 2:370586/1‑270 (MQ=14) ccACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAATGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACg < 2:726139/275‑1 (MQ=255) ccACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACg < 1:396620/275‑1 (MQ=255) cACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAAACACGAAGGCGAGAGCGCTATCACCAACGGCGGCCCCGGCACGc > 2:539713/1‑275 (MQ=255) cGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAAAAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCa > 1:655037/1‑261 (MQ=255) cGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCCGTTGTCAACAACGAAGGCGAGGGCGCCCGTCCCAACGGAGGAGCCGGAACCCCGAGTAAccgagacg > 2:264551/1‑268 (MQ=14) aaaaCCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGAtt < 2:655038/261‑1 (MQ=255) gaccaccGTTTAGCGTAAGGTTGCAACCGGAACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCAATCTGGAGGTCCGCGGCTGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGGGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCa < 2:758579/274‑1 (MQ=17) aaccgcctgtGACGGTAAAGATTCACCCGGTACGGAAAGAAACGGGAATAACGGAAAAGTTATGCAGGACGGCGATCTGGAGGGCAGCGGCGGCGGTCACGGTATTGATATCACCGGAGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCa < 1:197523/266‑1 (MQ=14) aaCCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGGTACCACCGGGGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCa < 2:600594/275‑1 (MQ=255) ggTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACAAACGGTGGCACCGGCACGCAGATTAACGGTGATAACGCCACGGCAAACAACAACCGCAAAacccacg > 2:553124/1‑270 (MQ=255) gTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCGATCGTCAATAACGAAGGCGAGAGCACCATCACCAAGGGCGGCACCGGCCCCACGATCAACGGTAACGACGCCACCGCGAAAAAAAACGGCAAAACCACCgg > 1:706224/1‑273 (MQ=11) tACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCCGTTGTCAACAACGAAGGCGAGAGCGCCATCACCAACGGCGGCACCGGCACGCCGATCAACGGTGACGACGCCACCGCAAACAACAACGGCAacacacacgtt > 1:863601/1‑267 (MQ=14) acAACGGTAATAGCGGCATAGTTATGCAGACAGGCGACCTGGATGTCAGGGGCGGCGGTCAGTGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACCAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGTCACGCAGATTAACGGTGATTACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAg < 2:767902/274‑1 (MQ=17) aaCGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGCCCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGAAGGCGACCAGGCGGTCGTTAACAAAGAAGACGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGAGGACGCCACGGCAAACAACACCGGCAAAACCACCgcagccagcaacca > 2:596712/1‑262 (MQ=17) gtttCAGGACGGCGCTCGTGGTGTCAGCGGCGGCGGGTACTGGATTGATATCACCTGTGAATGGGGAACGTTGGATAACAAGGGCACCATTACCGTCACCGTTCCGGAGTCCATCGGTATCCAGAGTGTCGGCTAGATGGCTGTTGATAATAACGAAGGCGCGGACACCATCACTAGCGGGGGCGTCGGCACGGTGAGTTGTGTAGATGAGGCAGCGGTAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTg < 1:867642/273‑1 (MQ=2) gagtCAGGACGGCGGTCTGGATGTCAGCGGCGGCGGTCACGGTATGGATATCGCCGGGGACAGCGCGACGGTTGATAACAAGGGCACCGTGACCGTCACCGATCCGGAGTCCATGGGTATCCAGGTCGACGGCGACCAGGCGATTGTTAAAAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTg < 1:189397/272‑1 (MQ=11) ttCACGACGGCGATCTGGATGGCAGCGGCGGCGGACACGGTATTGACATCAGCGGCGACAGCGGAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCt < 2:116016/275‑1 (MQ=255) acgtggtccTGCATGTAAGCGGCGGCGTTCACTGTATTGATACCCCCGGCGACAGCCCCACGGTGGATAACACGGGCACCATGACCGTAACCGATCCGGAGTCCATGGGTATCCAGTTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGGGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCGCCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAAt < 2:736404/267‑1 (MQ=17) aCGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGc > 2:740859/1‑224 (MQ=255) cGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACg > 2:260056/1‑259 (MQ=255) ggCGATCTGGATGTCAACGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTCGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGCGGCACCGGCACTCAGATACACGCTGTTGACCACACGTCACGCAACAACCGCAAGACCACGGTTGAAGCTAAGGCTTCGCCCGCTCCGGAAAATACTgcacatc > 1:797824/1‑268 (MQ=14) cGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCaaaa < 1:740858/224‑1 (MQ=255) cGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTAAGGAAATGGCTGGCACTAACg > 2:439585/1‑275 (MQ=255) gATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGaaa < 1:260056/259‑1 (MQ=255) agcTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACg < 2:567168/271‑1 (MQ=255) aGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGagag > 1:672269/1‑140 (MQ=255) ggggcggTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTGGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGGGATTCAGGa < 2:152809/272‑1 (MQ=255) gcggcggTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGcc < 2:672270/140‑1 (MQ=255) ggtccgggtcagtaatacACCGCAGACAGCGCAACGGTAGATATCAAGGGCACGAAGACCTTCATCGGGCCGTAGTCCATCGGTATCCAGGTTGACGGCGACAAGGCGGTCGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCg < 2:76653/257‑1 (MQ=17) tCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCg > 2:674776/1‑92 (MQ=34) aCCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAgcggcgg > 1:333789/1‑275 (MQ=255) aCCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCGGGCAATAACGGGCAGGTAATTCAGGACGGCGATCTGGATGTCAgcggcgg > 2:830324/1‑275 (MQ=255) aCCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGGCCCCGAACACGCATCTGTCGGTGTCGAGGTTGACGCCAGCCTGGAGCTTGGTAATCACGAAAGCGTGAGCGCCATAACCAAAGGTGGCACCGGAACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGGAGAGCCACAGTTACAGGCAAGAAGTCCAACCGGAGGGAAATGGGAGGCAATAACGGGAAGGAGATTTAGGCAGGCGaacggggttgcagcgtgg > 1:171299/1‑257 (MQ=12) cGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGCGGCACCGGCACGCAGATCAACGGTGACGACGCCACCGCAAATAACAGCGGAAAAACCACCGTTGACGGAAAAGATTCCACGGGTACGAAAATAGCGGGCAATAACGGGACTGTCAATCCGGACGGTAACCTGACTGTCAgaggcggcg > 1:420112/1‑275 (MQ=11) cAGGGCAACAGGGGGTAAAAAGGGCACCATGACCGTATCCGATCCGGAGTCCATGGGTATCCAGTTCGACGGCGACTAGGCCCTCGTGAAAAACGAAGGCGAGAGCTCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAAGCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGTAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCa < 1:87995/273‑1 (MQ=11) ggTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGata < 2:333790/275‑1 (MQ=255) gATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCa > 2:660726/1‑274 (MQ=255) agagccccgtGACCCTCCCCGCTCCTGATTCCATGGGTATCCAGGTTGGCGGTGACCAGGCGGTTGTCAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGAGTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGa < 1:842082/265‑1 (MQ=17) agCACCCTGACCGTCACCGATCCGGAGGCCATCGGTAGCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAg < 1:660725/274‑1 (MQ=255) gCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAgc > 2:10558/1‑275 (MQ=255) cgtGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGGTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGc < 1:10558/263‑1 (MQ=255) cATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTCTTGATATCCCCGGCGACAGCGCaa > 2:157606/1‑275 (MQ=255) tGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGACGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACg > 2:47774/1‑275 (MQ=255) tGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGAc > 2:619618/1‑215 (MQ=255) cGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCg < 1:619617/215‑1 (MQ=255) aCCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGAAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTCATTCAGGACGGCGATCTGGGTGTCAGAGGCGGCGGGAACGGTATTGATATCCACGGCGACAGGGAAACGGCGAATa > 2:759634/1‑274 (MQ=17) aCCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGAAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTCCTGGCAATAACGGGAAGGTGATCCAGACCGGCGATCTGGCTGTCAGCGGCGGCGGTCACGGTCTGACTATCATCGGCGTCATCGCAACGGTGCAtc > 2:443212/1‑273 (MQ=17) aTCCGGAGCCCATCGGTATCCAGGTTGACGGGGGCCAGGACGTCGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACCCAGATTAACGGGGATGAAGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAg < 2:700124/275‑1 (MQ=255) aTCCAGAGTCCATCGGTATCACGGTTGACGGCGACCCGGCGGTTGTTAACAACGAAGGCGAGAGCGCCACCAACAACGGGGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAg < 2:171299/275‑1 (MQ=255) aTCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCTATCACCAACGGCTGCACCGTCACGCAGATTGACGGTGACGACGCCACGGCTAACAAAAACGGCAAAACTCCCGGTGACGTCAAGGAATCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGGGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCAACGGTCACAGCGAAACCGGTGATAACAAgggacacatgca > 1:220990/1‑266 (MQ=17) aTCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGAAAATTGCTGGCAATAACGGGAAGGTGAATCAGGACGGTGACCTGGATGTCAGCGGCGGCGGTAACGGTATTGACACTGCCGGCGACCGACCCACGTTGGCTAAACAGGGcccccggac > 1:416305/1‑270 (MQ=17) tCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATCAACGTTGATGACGCCACGACCTACAACAACCGCCGAACCACCGTTGACGGAACGGGTTCCACCGGTACGGAAATTGATGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTTATATCACCGGCGAAAGCCAAACGGTGGATCACAAgcgacccctcacc > 1:356971/1‑263 (MQ=17) tCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGCGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACGGGTACGAAAATCGCTGGCAATAACGGCAAGGTCATTCAGGACGGTGATCTGGCTGTCAGCGGCGGTGGGCACGGTGTTGTAAGCACCGGCGACCACGCCACGGTCAACAACAAgggacacattgcg > 1:809751/1‑265 (MQ=17) tATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGAAGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCa > 2:592235/1‑275 (MQ=255) tCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCACAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAGACTGCTGGCAATAACGGGAAGATGATTCAGGATGGCGATCTGGATGTCCGCGGCGCCGGGCCCGGTATTGATATCACCGGCGATAGCGCAACGGTGGAAAACAAGGGCACCATGACGGTCAc > 1:49538/1‑274 (MQ=17) tCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGCTCTGGATGTCAGCGGCGGCGGGCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCAc > 2:596853/1‑274 (MQ=255) ttGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCTGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACAATGACCGTCACCGCTcc > 2:276969/1‑274 (MQ=255) tgtgaggCGACCCGGCGGTTGTTAACAACGAGGGCGAGGGCGCCATCAACAACGGTGGCACCGGCACGCAGATGAACGGGGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGTTTCAGGACGGCGAGCTGGATGTCAGAGGCGGCGGAGACGGCACGGAGACAACGGGAGACAGGGAAACGGGGGAGAACAAGGGCACCATGACCGTCACCGATCCg < 1:157606/270‑1 (MQ=17) gACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGCCGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCAACCGGGACGGAAATTGCTGGCAATAACGGGAAGGGGATTCCGGACGGCGATCTGGCTGTCAGAGGCGGGGGGCAGGGGATTGAGAACACCGGCGACAGCGCAACGGTGGACACCAAGGGCACCATGTCAGTCCCCGATCCGGa > 1:840726/1‑275 (MQ=17) cGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGCCACGGTTTTGATATCCCCGGCGACCGCGCCACGGTGGACAACAAGGGCACCATGACCGTACCCGATCCGGAGt > 2:680272/1‑275 (MQ=255) cGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTAACGACGCCACGGCCAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACGGGTACGGAAATTGCTGGCAATAACGTGATGGGGAATCAGGAAGGCAATCTGAATGTTACCGGCGGCGGGCACGGTGTTGCTATCACTGGCTACAGCTCAACGACGGATAACACGGCCACCGTGAcagctccacatgtgcagt > 1:661627/1‑258 (MQ=17) | CCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGT > NC_000913/1466311‑1466841 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |