| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,726,507 | Δ1 bp | coding (485/600 nt) | nemR → | transcriptional repressor for the nemRA‑gloA operon, quinone‑, glyoxal‑, and HOCl‑activated |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,726,507 | 0 | T | . | 100.0% | 163.4 / NA | 37 | coding (485/600 nt) | nemR | transcriptional repressor for the nemRA‑gloA operon, quinone‑, glyoxal‑, and HOCl‑activated |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base . (17/20); total (17/20) | |||||||||||
CGATCTGTCAGAAGATATGCGCAGCGCGATGGATAAAGGTGCTCGCGGCGTGATCGCCCTGCTCTCTCAGGCGCTGGAAAATGGCCGTGAGAACCATTGTTTAACCTTTTGTGGCGAACCGCTGCAACAGGCACAAGTGCTTTACGCACTGTGGCTTGGCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGAC > NC_000913/1726370‑1726644 | ctatcgggcAGTAGATATGCGCAGCGCGATGGATAAAGCTCCTTGGTGCGTTTGCGTCCTGCTCTCTCAGGCGCTGGAAAATGGCCGTGAGAACCATTGTTTAACCTTTTGTGGCGTACCGCTGCAACAGGCACAAG‑GCTTTa < 1:809371/135‑1 (MQ=255) tCAGAAGATATGCGCAGCGCGATGGATAAAGGTGCTCGCGGCGTGATCGCCCTGCTCTCTCAGGCGCTGGAAAATGGCCGTGAGAACCATTGTTTCACCTTTTGTGGCGAACCGCTGCAACAGGCACAAG‑GCTTTACGCCCtt > 2:801333/1‑142 (MQ=255) cAGAAGATATGCGCAGCGCGATGGATAAAGGTGCTCGCGGCGTGATCGCCCTGCTCTCTCAGGCGCTGGAAAATGGCCGTGAGAACCATTGTTTAACCTTTTGTGGCGAACCGCTGCAACAGGCACAAG‑GCTTTACGCACtgt < 1:877624/143‑1 (MQ=255) gaagaTATGCGCAGCGCGATGGATAAAGGTGCTCGCGGCGTGATCGCCCTGCTCTCTCAGGCGCTGGAAAATGGCCGTGAGAACCATTGTTTAACCTTTTGTGGCGCACCGCTGCAACAGGCACAAG‑GCTTTACGCACtctgc > 2:141513/1‑142 (MQ=255) gcAGCGCGATGGATAAAGGTGCTCGCGGCGTGATCGCCCTGCTCTCTCAGGCGCTGGAAAATGGCGGTGAGGACCATTGATTAACCTTGCGTGGCGGACCGCGGCAACAGGCAAAAG‑GCTTGACGGACGGGTGCGCGGCGCGa > 1:419794/1‑143 (MQ=255) gcAGCGCGATGGATAAAGGTGCTCGCGGCGTGATCGCCCTGCTCTCTCAGGCGCTGGAAAATGGCCGTGAGAACCATTGTTTAACCGTTTGTGGCGAACCGCTGCAACAGGCACAAG‑GCTTTACGCACTGTGGCTTGGCGCGa > 2:78021/1‑143 (MQ=255) aTAACGGGGCTCGCGGCGTGCTGGCCCTGCTCTCTCAGGCGCTGGAAAAGGGCCGTGAGAACCATTGTTTAACCTTTTGTGGCGAACCGCTGCAACAGGCACAAG‑GCTTTACGCACTGTGGCTTGGCGCGAATCTGCAGGCCa < 1:138969/143‑1 (MQ=255) tAACGGTGCTCGCGGCGTGATCGCCCTGCTCTCTCAGGCGCGGGAAAATGGCCGTGAGAACCATTGTTTAACCTTTTGTGGCGAACCGCTGCAACAGGCACAAG‑GCTTTACGCACTGTGGCTTGGCGCGAATCTGCAGGCCaa < 1:766756/143‑1 (MQ=255) gCTCGCGGCGTGATCGCCCTGCTCTCTCAGGCGCTGGAAAATGGCCGTGAGAACCATTGTTTGACCTATTGTGGCGAACCGCTGCAACAGGCACAAG‑GCTTTACGCACTGTGGCTTGGCGCGAATCTGCAGGCCAAAATTTcg > 2:553330/1‑143 (MQ=255) tCGCGGCGTGATCGCCCTGCTCTCTCGGGAGAAAAATAATTGGCGTGAGAACCATTGTTTAACCTTTTGTGGCGAACCGCTGCAACAGGCACAAG‑GCTTTACGCACTGTGGCTTGGCGCGAATCTGCAGGCCAAAATTTcgcg < 2:830032/143‑1 (MQ=255) cgTGATCGCCCTGCTCTCTCAGGCGCTGGAAAATGGCCGTGAGAACCATTGTTTAACCTTTTGTGGCGAACCGCTGCAACAGGCACAAG‑GCTTTACGCACTGTGGCTTGGCGCGAATCTGCAGGCCAAAATTTCGCGCAGtct > 2:227182/1‑141 (MQ=255) gATCGCCCTGCGCTCTCAGGCGCTGGAAAATGGCCGTGAGAACCATCGTTTAACCTTTTGTGGCGCACCGCTGCAACAGGCACAAG‑GCTTTACGCACTGTGGCTTGGCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGa < 2:187186/143‑1 (MQ=255) tCGCCCTGCTCTCTCAGGCGCGGGAAAATGGCCGTGAGAACCATTGTTTAACCTTTTGTGGCGAACCGCTGCAACAGGCACAAG‑GCTTTACGCACTGTGGCTTGGCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGc < 2:232441/143‑1 (MQ=255) tgtgtcggggtGGATATTGGCCGTGAGAACGTTTGTTTAACTTTTTGTGGCGGACCGCTGCAACAGGCATAAG‑GCTTTACGCACTGTGGCTTGGCGCGAATCTGCAGGCCAAAATTTCTCGCAGTTTCGAGCCACTGGAAAAc < 1:126282/133‑1 (MQ=255) gctcGGGGGCTGGAAAATGGCCGTGAGAACCAGTGTTGAACCTTTTGTGGCGAACCGCTGCAGCGGGCACAAG‑GCTTGACGCGCTGTGGCGTGGCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAAc < 1:631656/142‑1 (MQ=255) cgcTGGAAAATGGCCGTGAGAACCATTGTTTAACCTTTTGTGGCGAACCGCTGCAACAGGCACAAG‑GCTTTACGCACTGTGGCTTGGCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTgg < 2:710377/143‑1 (MQ=255) gcTGGAAAAGGGCCGTGAGAACCATTGTTTAACCTTTTGTGGCGAACCGCTGCAACAGGCACAAG‑GCTTTACGCACTGTGGCTTGGCGCGAATCTGCAGGCAGATATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGc < 1:188717/143‑1 (MQ=255) tGGAAAATGGCCGTGAGAACCATTGTTTAACCTTTTGTGGCGAACCGCTGCAACAGGCACAAG‑GCTTTACGCACTGTGGCTCGGCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGccc > 1:118220/1‑143 (MQ=255) ggAAAATGGCCGTGAGAACCATTGTTTAACCTTTTGTGGCGAACCGCTGCAACAGGCACAAG‑GCTTTACGCACTGTGGCTTGGCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAGCGCGCTGGcccc > 2:579151/1‑142 (MQ=255) gAAAATGGCCGTGAGAACCATTGTTTAACCTTTTGTGGCGAACCGCTGCAACAGGCACAAG‑GCTTTACGCACTGTGGCTTGGCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCAt < 1:640304/143‑1 (MQ=255) aaaaTGGCCGTGAGAACCATTGTTTAACCTTTTGTGGCGAACCGCTGCAACAGGCACAAG‑GCTTTACGCACTGTGGCTTGGCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATg > 2:867967/1‑143 (MQ=255) aaaaTGGCCGTGAGAACCATTGTTTAACCTTTTGTGGCGAACCGCTGCAACAGGCACAAG‑GCTTTACGCACTGTGGCTTGGCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATg > 2:513125/1‑143 (MQ=255) aaCCATTGTTTAGCCTTTTGTGGCGAACCGCTGCAACAGGCACAAG‑GCTTTACGCACTGTGGCTTGGCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACattatt < 2:217381/143‑1 (MQ=255) cggctggttgtccgtttGTGGCGTTCCGCTGCAACAGGCACAAG‑GCTCTACGCACTGTGGCTTGGCGCGAATCTGCAGGCCATAATTTCGCGCAGTTTCGAGCCACTGGAAATCGCGCTGGCCCATGTAAAAAACATTATTGc < 1:297476/129‑1 (MQ=255) cATTGTTTAACCTTTTGTGGCGAACCGCTGCAACAGGCACAAG‑GCTTTACGCACTGTGGCTTGGCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCg > 2:580192/1‑143 (MQ=255) tttAACCTTTTGTGGCGAACCGCTGCAACAGGCACAAG‑GCTTTACGCACTGTGGCTTGGCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAGAACATTATTGCAACGcc > 2:568689/1‑143 (MQ=255) tAACCTTTTGTGGCGAACCGCTGCAACAGGCACAAG‑GCTTTACGCACTGTGGCTTGGCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTg > 1:616129/1‑143 (MQ=255) cTTTTGTGGCGAACCGCTGCAACAGGCACAAG‑GCTTTACGCACTGTGGCTTGGCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGt > 1:79211/1‑143 (MQ=255) gtggtgGCGAACCGCTGCAACAGGCACAAG‑GCTTTACGCACTGTGGCTTGGCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGttt < 2:587351/140‑1 (MQ=255) ttGTGGCGAACCGCTGCAACAGGCACAAG‑GCTTTACGCACTGTGGCTTGGCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTa < 2:29444/143‑1 (MQ=255) tgGCGAACCGCTGCAACAGGCACAAG‑GCTTTACGCACTGTGGCTTGGCGCGAATCTGCAGGCCAAAATTTAGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATCATTGCGACGCCTGCCGTTTAGCa > 2:516163/1‑143 (MQ=255) ggCGCAGCGCTGCAAAACGGACAAG‑GCTTTACGCACTGGGGGTTGGCGCGAAGCTGCAGGCCAACATTTCGCGGAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAg < 1:76347/143‑1 (MQ=255) gCGAACCGCTGCAACAGGCACACG‑GCTTTTGTTACTGTGTCTTGGCGCGATTTTGCAGGCCTAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAgg < 2:235484/143‑1 (MQ=255) gCGAACCGCTGCAACAGGCACAAG‑GCTTTACGCACTGTGGCTTGGCGCGAATCTGCAGGCCAAAATTACGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCCTGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAgg > 1:441235/1‑143 (MQ=255) tGCAACAGGCACAAG‑GCTTTACGCACTGTGGCTTGGCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGACACTGGGGAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTa < 2:554056/143‑1 (MQ=255) cAACAGGCACAAG‑GCTTTACGCACTGTGGCTTGGCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATc < 1:553330/143‑1 (MQ=255) cacaAG‑GCTTTACGCACTGTGGCTTGGCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAgac > 2:689761/1‑143 (MQ=255) | CGATCTGTCAGAAGATATGCGCAGCGCGATGGATAAAGGTGCTCGCGGCGTGATCGCCCTGCTCTCTCAGGCGCTGGAAAATGGCCGTGAGAACCATTGTTTAACCTTTTGTGGCGAACCGCTGCAACAGGCACAAGTGCTTTACGCACTGTGGCTTGGCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAGCAGGCATTTTTTATCACCAGAC > NC_000913/1726370‑1726644 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |