New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 120780513 (0.260)43 (0.970) 34/250 0.2 79.2% coding (305/630 nt) stfP e14 prophage, uncharacterized protein
?NC_000913 = 1209602 11 (0.250)pseudogene (18/501 nt) stfE pseudogene, e14 prophage, side tail fiber protein fragment family,Phage or Prophage Related

CCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGG  >  NC_000913/1207667‑1207946
                                                                                                                                          |                                                                                                                                             
ccAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctct                                                                                                                                           <  2:247049‑M1/143‑5 (MQ=255)
 cAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCGCTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGAGATCAAATCGGATGGCACTGTGCAAACGGCTATCGGAAACCAAGGTGTGGGAGAAGGctaag                                                                                                                                          >  1:454642‑M1/1‑138 (MQ=255)
 cAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctg                                                                                                                                          >  2:37063‑M1/1‑138 (MQ=255)
     cTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTGCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcatt                                                                                                                                      <  2:855306‑M1/143‑10 (MQ=255)
         atcgtggttgtggtcatctcgtaatacgtgtacatagcgaatatgtatgttaaatcccgctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttgataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAAt                                                                                                                                  >  1:557754‑M1/115‑143 (MQ=255)
               ggcggcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTGGGCTTGGGAGAAGGctctgcattacctgttggt                                                                                                                            >  1:85338‑M1/1‑124 (MQ=255)
                  ctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTCGGAGAAGGAGCAAAActcaatgcatgaacg                                                                                                                         <  1:872448‑M1/38‑7 (MQ=255)
                   gcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGACAACGTTAGCCTGGGAGAAGGctctccattacctgttggggtcc                                                                                                                        >  1:384628‑M1/1‑120 (MQ=255)
                     aCGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccg                                                                                                                      <  2:264018‑M1/143‑26 (MQ=255)
                      tcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTa                                                                                                                     <  2:589853‑M1/42‑1 (MQ=255)
                      tcatgtgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgctatttcttcattttcataaacgCTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACggcga                                                                                                                     <  1:195348‑M1/42‑3 (MQ=255)
                        aCCAGTTACTTACCGCACTTCGCGCGCTGCTGTCCAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAATCCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggtt                                                                                                                   <  2:72575‑M1/143‑29 (MQ=255)
                         tttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaatagcagaaatgatgccatttgcttgttatttcttcattttcatcaacgTTGGTTTGTGGCACGGACCAACACTCCACGCAGCCACGGCTCCAt                                                                                                                  <  2:860958‑M1/45‑1 (MQ=255)
                         tttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGGGAAGGCGCAAAACTCAATGCAGCAACGGCTACAt                                                                                                                  <  2:783393‑M1/45‑1 (MQ=255)
                          ttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgattgttatttcttcattttcataaccgTTGGTCTGGAAGACGTACGAAAACTCAGTGCAGCAacggctccagt                                                                                                                 <  1:853761‑M1/46‑6 (MQ=255)
                            gttgatacgcgtacagagccaataagcttgttatatccccctggtataatcaggaatgatgccatttgcttgttatttcttcattttcataaccgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAg                                                                                                               >  1:854669‑M1/96‑143 (MQ=255)
                            gatgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAg                                                                                                               >  2:358631‑M1/96‑143 (MQ=255)
                            gTTACTTTCCGCACTTCGCGCGCTGGTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgt                                                                                                               <  1:408724‑M1/143‑33 (MQ=255)
                            gTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgt                                                                                                               <  2:522752‑M1/143‑33 (MQ=255)
                             ttacttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCATACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtccgggttgcgtg                                                                                                              >  2:722099‑M1/1‑110 (MQ=255)
                             ttacgtacCGCGCTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGGTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtg                                                                                                              <  1:211259‑M1/143‑34 (MQ=255)
                               actctctgcgcttcgcgtgctTCTGTTAAGCCGCAAGAATCCTTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGTCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggc                                                                                                            <  1:71539‑M1/133‑36 (MQ=255)
                                 ttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggcct                                                                                                          >  2:727060‑M1/1‑106 (MQ=255)
                                  acgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttaataaacgTTGGTTTGGGAGAATGAAAAAAACTCAATGCAGCAACGGTTACATGAGGACgcg                                                                                                         <  1:258812‑M1/54‑2 (MQ=255)
                                   acCGTACTTCTCGCGCTGCTGTTAAGCCGCAAGAATCCGTGTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttc                                                                                                        <  1:103074‑M1/143‑40 (MQ=255)
                                   acCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAGACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAACACTCAATGCAGCACCCGCTCACTAAGGACGcca                                                                                                        >  1:704105/1‑141 (MQ=18)
                                      gCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgttgccttcagc                                                                                                     >  2:649169‑M1/1‑101 (MQ=255)
                                        acatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcactttcataaacgTTGGTTTGCCATGAGGATCAAAACTCACTGCAGCAACGGCTCCATTAGGACGCACCGGtt                                                                                                   <  2:686793‑M1/60‑1 (MQ=255)
                                           tCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCa                                                                                                <  2:101974/143‑1 (MQ=255)
                                            cgttcgctcctGTTAAGCCGCAAGACCCCGTTCGGCAATATCAAATCGTATGGCACTGTGCAAACGGCTCTCGAAATCCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactcc                                                                                               <  1:29282‑M1/139‑49 (MQ=255)
                                            cgtgcgctgcTGTTAAGCCGCAAGAGTCCGTTTGGCGATATCAAATCGTATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactcc                                                                                               <  1:707016‑M1/140‑49 (MQ=255)
                                              cgcgcTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAg                                                                                             <  2:824819/143‑1 (MQ=255)
                                               caataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGACTACATTAAGAAGCACCGGTTTCATAGc                                                                                            <  1:479037‑M1/67‑1 (MQ=255)
                                                aataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCt                                                                                           <  2:651368‑M1/68‑1 (MQ=255)
                                                 gctgctGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaa                                                                                          <  2:421944‑M1/143‑54 (MQ=255)
                                                  taagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTttcataccgat                                                                                         <  1:372261‑M1/70‑6 (MQ=255)
                                                      tgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggctccgtggccttcagccactccgccaacaggc                                                                                     >  1:233737‑M1/1‑85 (MQ=255)
                                                       gTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTGCGGGAGAAGGctctgcattacctgttggtgtaccggttccgtggccttcagccactccgccaacaggcc                                                                                    >  1:219704‑M1/1‑84 (MQ=255)
                                                        tgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGt                                                                                   <  2:734747‑M1/76‑1 (MQ=255)
                                                        tgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttattcactccttttgatagacgATTGATCGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGt                                                                                   >  2:641450‑M1/68‑143 (MQ=255)
                                                           taaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTCCATTAGGACGCACCGCTGTCATAGCTATAACGGTTAt                                                                                <  1:161360‑M1/79‑1 (MQ=255)
                                                              cGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaa                                                                             >  2:166301‑M1/1‑77 (MQ=255)
                                                               gCAAGAATCCGTTTGCCGACATCAAGTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcatcacctgtcggtgtgccggttccgtggtcttcagccactccgccagcaggctggctgaaa                                                                            <  1:460255‑M1/143‑68 (MQ=255)
                                                                  ccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggt                                                                         <  1:720067‑M1/86‑1 (MQ=255)
                                                                  agagTCCGTTGGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggt                                                                         <  2:388593/143‑1 (MQ=255)
                                                                   cctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGCGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCCTAGCTATACCGGTTATGATtggtg                                                                        <  2:800705‑M1/87‑1 (MQ=255)
                                                                    catCCGTTGGGCGATATCACATCGGATGGCACTGTGCAAACGGCTCTCGAAATCCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaa                                                                       <  1:377510‑M1/142‑73 (MQ=255)
                                                                      tCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtagccttcagccactccgccaacaggctggctgaaatccactg                                                                     >  1:523475‑M1/1‑69 (MQ=255)
                                                                       gtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTAt                                                                    <  2:664959‑M1/91‑1 (MQ=255)
                                                                           aagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCTATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAg                                                                >  2:389515‑M1/49‑143 (MQ=255)
                                                                           aagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGTGATTGAg                                                                <  2:61021‑M1/95‑1 (MQ=255)
                                                                             ggCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTa                                                                     <  2:615677/136‑1 (MQ=255)
                                                                             ggCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTa                                                                     >  1:615677/1‑136 (MQ=255)
                                                                             ggCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCa                                                              <  1:607731/143‑1 (MQ=255)
                                                                              gCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgct                                                             <  2:537455‑M1/143‑83 (MQ=255)
                                                                               cGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctt                                                            >  2:665587‑M1/1‑60 (MQ=255)
                                                                                ggaattgtgccatgtgcttgttatgtcgtgatttgcagaaacgTGGGTGGGGGAGAAGGAGCAAAACTCGATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATc                                                           >  2:256230‑M1/44‑143 (MQ=255)
                                                                                gATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgcttt                                                           <  1:109230‑M1/143‑85 (MQ=255)
                                                                                    ccgcaTCGTATGTCATTTTGCAAACGGCGCTCCAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCCGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTa                                                       <  2:246794/139‑1 (MQ=255)
                                                                                       tgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGGATTGAGCAATGAGTAatg                                                    <  1:657235‑M1/107‑2 (MQ=255)
                                                                                       aaTCGGATGGCACTGTGCAAACGGCTATCGGAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccaatccgccaacaggctggctgaaatgcaatggtggcgcgttatctgct                                                    >  2:472441‑M1/1‑52 (MQ=255)
                                                                                         tCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccgtcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctga                                                  <  2:449108‑M1/143‑94 (MQ=255)
                                                                                          cggagggggcTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATCGCTATGACGATGAAGATTGCTGGCCCTGCGCAATCAGTAATCAtt                                                 <  1:190451/134‑1 (MQ=37)
                                                                                          cGGATGGGACTGTGCAAACGGCTCGCGAAAACCTTGGTTTGCGAGAAGGctctgcattacctgttggtgtccctgttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaa                                                 <  2:122728‑M1/143‑95 (MQ=255)
                                                                                          cGGATGGCACTGTGCAACCGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctccgcattacctgttggtgtcccggttccgtggccttcagccacgccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaa                                                 <  1:439813‑M1/143‑95 (MQ=255)
                                                                                          cGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCAtt                                                 <  1:233769/143‑1 (MQ=255)
                                                                                               ggCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaata                                            <  1:78160‑M1/143‑100 (MQ=255)
                                                                                               gctgggtatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTg                                            >  1:316370‑M1/29‑143 (MQ=255)
                                                                                                    ttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTAGTGAGCAATCAGAAATCAGTCAGtgggggc                                       <  1:71441‑M1/120‑2 (MQ=255)
                                                                                                    ttatttcttcagtttcataatcgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGt                                       >  2:64450‑M1/24‑143 (MQ=255)
                                                                                                    ttagttcctcagtttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACTGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGt                                       >  1:755653‑M1/24‑143 (MQ=255)
                                                                                                         gaacGGCTCTCGCAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccgtttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactg                                  <  1:431276‑M1/142‑110 (MQ=255)
                                                                                                          cttcattttgatgattgTTTGTTTGGGAGAAGGAGCATGACTCAATGCAGCAGCGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATg                                 >  1:415605‑M1/18‑143 (MQ=255)
                                                                                                          cttcattttcagaaacgTTGGGTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATg                                 >  1:496640‑M1/18‑143 (MQ=255)
                                                                                                           ttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAGCTCAATGCAGAAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGc                                >  1:50846‑M1/17‑143 (MQ=255)
                                                                                                            cGGTTCTCGAGAGGCTTGGTTTGGGAGAAGGATCAAAACGCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGcc                               <  1:72433/143‑1 (MQ=255)
                                                                                                              gttctcgaAAGCCTCGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaa                             <  1:649169‑M1/141‑115 (MQ=255)
                                                                                                              gCTCTCGAAACCCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccattccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaa                             <  2:395558‑M1/143‑115 (MQ=255)
                                                                                                               ttttcataaacgATGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGATATGATTGGTGGTATTGAGCAATCAGTAATCAGTCAGTGGGGGTGGAAGGCCGCa                            <  1:163887‑M1/131‑1 (MQ=255)
                                                                                                                tctcGGAAACCGTGGTTTGGGAGAAGGctctgcattacttgttggtgtcccggttccgtggccttcagccagtccgccaacaggctggctgaaatgcaatggtgccgctttttgtgctgaagaatacccggaactggcaaaag                           >  1:195658‑M1/1‑27 (MQ=255)
                                                                                                                tctcGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaagg                           >  2:606180‑M1/1‑27 (MQ=255)
                                                                                                                tctcGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCaa                           >  1:453078/1‑143 (MQ=255)
                                                                                                                  tcGAAAACCTTGGTTTGGGAGAAGGctctgcattatctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaacggct                         >  2:16340‑M1/1‑25 (MQ=255)
                                                                                                                  tcGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagactacccggaactggcacaggct                         >  2:428253‑M1/1‑25 (MQ=255)
                                                                                                                   cgcggaccggggtttcggcgaaGGctctgcattccctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggctt                        <  1:738744‑M1/133‑120 (MQ=255)
                                                                                                                   cGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggctt                        <  2:739257‑M1/143‑120 (MQ=255)
                                                                                                                       aacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATc                    <  2:653840‑M1/139‑1 (MQ=255)
                                                                                                                        acgTCGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTTATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCt                   >  2:568596‑M1/4‑143 (MQ=255)
                                                                                                                         ccTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccga                  <  2:627626‑M1/143‑126 (MQ=255)
                                                                                                                         ccTTGGTTTGGGAGAAGGctcggcatgacctgtgggtggcccggtgccgtggccggcagccactccgccaacaggctggctgaaatgcaatggggccgctttttctgctgaagaatacccggaactggcaaaggcttatccga                  <  2:184979‑M1/143‑126 (MQ=255)
                                                                                                                            tGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaa               >  2:622499‑M1/1‑15 (MQ=255)
                                                                                                                              gtgtGGGAGAAGGAGCAATAGGCAGTAGAGGAACGGCTACATTAGGACGGACCGGTGTCATAGCTAGACCGGTTATGATTGGGGGGATTGAGCAAACATTGACCGGTCATTGGGGGTGGAATGCCGCAAAAGCATCTGCctct             <  1:860958/140‑1 (MQ=255)
                                                                                                                                 tGGGAGAAGGcgctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacgcggaactggcaaaggcttatccgacaaataaa          <  1:460605‑M1/143‑134 (MQ=255)
                                                                                                                                  gggAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactgacaaaggcttatccgacaaataaat         >  2:117684‑M1/1‑9 (MQ=255)
                                                                                                                                   ggAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggccaaggcttatccgacacataaatt        >  2:465565‑M1/1‑8 (MQ=255)
                                                                                                                                   GGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTggggg        <  2:259507‑M1/143‑1 (MQ=255)
                                                                                                                                    gagaAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaactgcactggtgccgcttcttctgctgaagaatacccggcacgggccaaggcttatccgacaaataaaccg       >  1:133434‑M1/1‑7 (MQ=255)
                                                                                                                                    GAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTgggggg       >  2:101205‑M1/1‑143 (MQ=255)
                                                                                                                                        AGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTAGGGGGGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATg   <  2:703081‑M1/143‑1 (MQ=255)
                                                                                                                                         ggctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgccaaataaattgcctgg  >  1:870690‑M1/1‑2 (MQ=255)
                                                                                                                                          |                                                                                                                                             
CCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGG  >  NC_000913/1207667‑1207946

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.