| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1979489 | 2 (0.040) | 50 (1.000) | 41/282 | 0.2 | 96.2% | intergenic (‑274/‑264) | insA/uspC | IS1 repressor TnpA/universal stress protein |
| ? | NC_000913 | = 2290111 | NA (NA) | intergenic (‑32/+1) | insH1/yejO | IS5 transposase and trans‑activator/pseudogene, autotransporter outer membrane homology,putative transport, Not classified, putative ATP‑binding component of a transport system | |||||
Only 100 of 123 total aligned reads displayed.
AAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGTGATTGAT > NC_000913/1979347‑1979630 | ggataacgccttaaatggcgaagaagcggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa > 1:855949‑M1/140‑143 (MQ=255)ggataacgccttaaatggcgaagaaacggtctaagtaggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa > 1:442723‑M1/140‑143 (MQ=255)ggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagcggattttatcgcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa > 2:644012‑M1/140‑143 (MQ=255)ggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa < 2:841905‑M1/4‑1 (MQ=255) gataacgccttaagtggagaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAt > 1:43446‑M1/139‑143 (MQ=255) gataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttcttcgcaccttccCTAAt < 2:567167‑M1/5‑1 (MQ=255) atgacgcgttatatggcgaagaaacggtctaaagaggctgattcaaggcatttacgggaaaaaaaatcggctcaaacatgaagacatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAtt > 1:430903‑M1/138‑143 (MQ=255) ataacgccttaaatggcgaagcaacggtctaaataggctgattcaatgcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaattactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAtt > 2:245248‑M1/138‑143 (MQ=255) taacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcggaccttacCTAATTa < 1:51781‑M1/7‑1 (MQ=255) taacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTa < 1:361526‑M1/7‑1 (MQ=255) acgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccccaatcgat < 1:19013‑M1/9‑5 (MQ=255) gccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttacCTAATTAAATa < 2:505058‑M1/11‑1 (MQ=255) gcctcaacgggcgaggaaccgggctaaataggctgagtcaaggcatttacgggagaaaaaatcggctcaagcaggaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATa > 1:747602‑M1/133‑143 (MQ=255) gacgtaaaggacgaaggaatggcctaaataggcagattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATa > 1:14366‑M1/133‑143 (MQ=255) ccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATAc < 2:715882‑M1/12‑1 (MQ=255) ttaaatggcgaaggaaggggttaaatggggtgattcaaggcagttaggggaggaaaaatcggctcaaacatgaagagaggaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACaa > 1:201413‑M1/130‑143 (MQ=255) aGGAATACTCCAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGAGAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcg < 1:297109‑M1/143‑11 (MQ=255) ggAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcga < 2:46949‑M1/143‑12 (MQ=255) taatCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaa < 2:580447‑M1/143‑16 (MQ=255) gcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTGATTAAATACAAAGAAAgg < 2:259604‑M1/21‑1 (MQ=255) gcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAgg < 1:784118‑M1/21‑1 (MQ=255) atCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACGGCACAACAAACTAAggcaggtgcgaacaagt > 2:738833‑M1/1‑126 (MQ=255) cGAAAAGGCATCTTCCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtcc < 2:135701‑M1/143‑20 (MQ=255) gAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccc < 1:472499‑M1/143‑21 (MQ=255) aaaTGGGATGTTGCGCGCAGTCAAAACAACCCACCGTAAATTAGTGTGTTCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccct < 2:324791‑M1/143‑22 (MQ=255) aaaTGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccct < 2:792181‑M1/143‑22 (MQ=255) aTGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaaggccctga < 1:402621‑M1/143‑24 (MQ=255) ggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCaa < 2:610275‑M1/31‑1 (MQ=255) aTGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatga < 2:528064‑M1/143‑29 (MQ=255) tctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACt < 2:699874‑M1/33‑1 (MQ=255) gTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgaga > 2:615862‑M1/1‑113 (MQ=255) gcgcACAGTCAAAATAACCTGACGTAAATAATCATCTGCTATAAATAATCACTTTCCTGCAATACCAGACAAGGTGTTTTTAAACAGACACTTACCGCACAACAAACGAAggaaggtgcgaacaagtccctgatatgagatca < 1:200485‑M1/143‑34 (MQ=255) gcACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAACCTAAggaaggtgcgaacaagtccctgatatgagatcatg > 2:754943‑M1/1‑108 (MQ=255) gctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCCCCAACCAACtttatgttaa < 2:544328‑M1/42‑1 (MQ=255) aGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatctgagatcatgtttg > 2:761156‑M1/1‑104 (MQ=255) tgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACttaatgttaatg < 2:696204‑M1/44‑1 (MQ=255) gTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCGATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgctatgagaccatgcttgt > 2:292232‑M1/1‑103 (MQ=255) gattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGa < 2:18349‑M1/45‑1 (MQ=255) ttcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGaaa < 2:204766‑M1/47‑1 (MQ=255) aaaaTAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaa > 2:45189‑M1/1‑100 (MQ=255) ggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAACATCCAACATTAGGGAATAATCAACTTAATGTTAATGAAATGttt > 2:838497‑M1/92‑143 (MQ=255) ggcatttacgggaaaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaattaccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGttt > 1:85395‑M1/92‑143 (MQ=255) catttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTa > 1:544183‑M1/90‑143 (MQ=255) cagttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatgtccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTa > 1:156945‑M1/90‑143 (MQ=255) tttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACa < 2:137320‑M1/56‑1 (MQ=255) tttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACa > 1:370728‑M1/88‑143 (MQ=255) cACCGTAAATAATCATCTGCTATAAATAATCACTTGCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagcca < 1:572802‑M1/143‑53 (MQ=255) ttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAGCAATCAACTTAATGTTAATGAAATGTTTTACat > 2:558187‑M1/87‑143 (MQ=255) acgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACatat > 1:397286‑M1/85‑143 (MQ=255) aataatCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaaca < 2:661390‑M1/143‑60 (MQ=255) aatCATCTTCTATCAATAATCATTTTCAACCAATACCAGATAAGCTATTTTTAAACAGACACCTACCGCACAACAAACTAAggaaggtgcgaagaaggcccggatatgagatcatgtttgtcatctggagccatagaacaggg < 1:62308‑M1/143‑63 (MQ=255) catcTGCTATCCATAATCACTTTCATGCAATACCAGATAAGCTATCTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttc < 2:1512‑M1/143‑66 (MQ=255) atcTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctcgagccatagaaccgggttca > 1:844486‑M1/1‑77 (MQ=255) cggctctaacatgtacatatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGtt > 1:380270‑M1/71‑143 (MQ=255) cggctcaaacatgacgaaatgaaatgcctgaggcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATACATTAACCACTTGtt > 1:423346‑M1/71‑143 (MQ=255) gctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAGTCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTa < 1:682836‑M1/75‑1 (MQ=255) gctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTCCATATATTAACCAGTTGTTTa < 2:214763‑M1/75‑1 (MQ=255) gctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccacgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTa < 1:226710‑M1/75‑1 (MQ=255) cTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTACggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatg > 1:387494‑M1/1‑72 (MQ=255) cTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACACACACTTACCGCACAACAAACTACggcaggtgcgaacaagtcccggatatgagatcatgtttgcaatctggagccatagagcagggttcatagcg > 1:387977‑M1/1‑72 (MQ=255) ctcaaacatgacgaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTaa > 1:727134‑M1/68‑143 (MQ=255) tcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGACCTAAACGTCGTGATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAAt < 2:834509‑M1/77‑1 (MQ=255) taaataaTCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagt > 2:721110‑M1/1‑69 (MQ=255) aaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGc < 1:784742‑M1/79‑1 (MQ=255) tCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaccagggttcatcatgagtcatcaac > 1:359125‑M1/1‑62 (MQ=255) cACTGTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaact < 1:590284‑M1/143‑83 (MQ=255) tttCATGCAATACCAGATAAGCTATTTTTAAACAGCCACTTACCGCACAACAAACTAAggaaggtgcgaacaagtcccttatatgacatcacgtttgtcatctggagccatagaacaaggttgatcatgcgtcatccactcac > 1:594331‑M1/1‑58 (MQ=255) aaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAg < 2:547025‑M1/89‑1 (MQ=255) ttCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacc > 2:688518‑M1/1‑57 (MQ=255) aaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGtacaa < 2:523727‑M1/94‑2 (MQ=255) agtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACACTCAACTTAATGTTAATGAACTGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTGCActgttttgtt < 2:63365‑M1/103‑4 (MQ=255) cagccgagaagaatttcccagcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAGCTTAATGTTAATGAAATGTTTTACATATATTAACAACTTGTTTAATGCGGAAAATCAGTAAACTATTTTATtata < 2:286244‑M1/106‑1 (MQ=255) agccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAACTGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCttatag < 2:183125‑M1/107‑2 (MQ=255) ccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAAtt < 2:45196‑M1/109‑1 (MQ=255) cTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcag < 2:485912‑M1/143‑107 (MQ=255) cTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcag < 2:13329‑M1/143‑107 (MQ=255) cTATTTTTAAACAGACACTTACCGCACAACAAACTAAgcaagatgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggggtcatcatgagtcatcaacttaccttcgccgacagtgaattcag > 1:681402‑M1/1‑37 (MQ=255) tATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagctcctgtttgtcatctggagccatagaacagggttcatcatgaatcatcaacttaccttcgcccccattgtagtcagc > 2:543663‑M1/1‑36 (MQ=255) gagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTAc > 1:813458‑M1/33‑143 (MQ=255) aTTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgcggacagtgaattcagca > 1:163152‑M1/1‑35 (MQ=255) gaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCACCAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACTACTTGTTTAATGCGGAGCATCAGTACACTATTTTCTTCTAATtacgt < 1:866201‑M1/113‑3 (MQ=255) tttAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaactgaccttcgccgacagtgaattcagcagta < 2:372867‑M1/143‑112 (MQ=255) aatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGa > 1:715882‑M1/27‑143 (MQ=255) tttccccgcttaaccacacctgccGGAGTTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGaaa > 2:361526‑M1/25‑143 (MQ=255) aCAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgaaatcatgtttgacatctggagccatagaacagggttcatcatgagtccacaacttacctacgccgacagtgacttcagcagtacgcga > 1:60312‑M1/1‑27 (MQ=255) caccgcttattcgcaccttccCTTATTAAATACTATGAAAGGCAACAATCAACTTAATGTTCATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGGAATta > 1:730904‑M1/22‑143 (MQ=255) cccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATtat < 1:118396‑M1/123‑1 (MQ=255) ccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATtata < 2:744888‑M1/124‑1 (MQ=255) ttcctgcactaCAAACTAGggtaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcattatgagtcatcaacttaccttcgccgacagtgaattcagcagtaggcgccgtcagac < 1:515552‑M1/138‑125 (MQ=255) ttACCGCGCAACAAGCGATggaaggtgcgaacaggtcgctgatatgggatcatgttggtcatctcgagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagac < 1:708653‑M1/143‑125 (MQ=255) attcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCa < 1:476861‑M1/130‑1 (MQ=255) cGCACAACAAACTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccaga < 2:421767‑M1/143‑129 (MQ=255) acaacaAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtacgcgccgtcagaccagaaaa > 2:27016‑M1/1‑12 (MQ=255) acaacaAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaa < 1:697864‑M1/143‑132 (MQ=255) accttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGa > 2:698722‑M1/8‑143 (MQ=255) aacaaACTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggggtcatcatgagtcatcaacttacctccgccgacagtgaattcagcagtaagcgccgtcagaccagaaaaga < 1:824547‑M1/143‑134 (MQ=255) ttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGTg > 2:560158‑M1/5‑143 (MQ=255) ccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGTGAt < 2:509632‑M1/141‑1 (MQ=255) aaTTAAATACAATGAAATGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAGATTATATGATCACCGGGAGtgattgat > 1:629893/1‑143 (MQ=255) aaTTAAATACAAAGAAATGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGTGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGtgattgat < 1:204766/143‑1 (MQ=255) | AAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGTGATTGAT > NC_000913/1979347‑1979630 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |