New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 404794	39 (0.780)	4 (0.090)	3/264	7.4	8.7%	coding (1092/1116 nt)	yaiC	diguanylate cyclase, cellulose regualtor
	?	NC_000913	= 404817	47 (1.000)					coding (1115/1116 nt)	yaiC	diguanylate cyclase, cellulose regualtor
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TTTACGGATTAGTGTGGGGGTTGCGCCGCTGAACCCACAAATGAGTCACTATCGTGAGTGGTTGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGATCACTGCAGCACGGAAGCCTTTCTCTTCCAGTACGCGTACCGCTTCAATGGTGGTGCCTCCCGGTGAGCAGA  >  NC_000913/404686‑404959                                                                                                                                    |                                                                                                                                               tttACGGTTTAGTGTGGGGGTTGCGCCGCTGAACCCACAAATGAGTCACTATCGTGAGTGGTTGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGa                                                                                                                                     <  2:307990/143‑1 (MQ=255) tttACGGATTAGTGTGGGGGTTGCGCCGCTGAACCCACAAATGAGTCACTATCGTGAGTGGTTGTAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGGAACCGCACCCAAGTGGCAGCCTGACGTCCGGCGa                                                                                                                                     >  1:21034/1‑143 (MQ=255)  ttACGGATTAGTGTGGGGGTTGCGCCGCTGAACCCACAAATGAGTCACTATCGTGAGTGGTTGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTGCGGCGag                                                                                                                                    >  1:726019/1‑142 (MQ=255)      ggATTAGTGTGGGGGTTGCGCCGCTGAACCCACAAATGAGTCACTATCGTGAGTGGTTGAAATCGGCAGATTTGGCGCTTTACCACGCAAAGCAAGCCGGACGTAACCGCACCAAAGAAGCGGCCTAAAGACCGGCAAAAGtc                                                                                                                                >  2:268324/1‑143 (MQ=255)                 ggggTTGCGCCGCTGAACCCACAAATGAGTCACTATCGTGAGTGGTTGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGagtcg                                                                                                                     >  1:398733/1‑139 (MQ=255)                 ggggTTGCGCCGCTGAACCCACAAATGAGTCACTATCGTGAGTGGTTGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTg                                                                                                                     <  2:625337/143‑1 (MQ=255)                 ggcgttgtcgcgcgGAACCCACAAACGGGTCACTATCGTGAGTGGTTGGAAGCGGCAGCGCGCGCGCTCGACAGCGGAAACAACGCCGCACGTAACCGCACCGAAGTGGCGGCCTGACGCCCGGCGAAAGTCATCAGGATTTg                                                                                                                     <  1:222697/133‑1 (MQ=255)                  tcgTTGCGCCGCTGAACCTACAAATTATTCATTATCGTGAGTGGTTGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTAGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGc                                                                                                                    <  2:477684/141‑1 (MQ=255)                    gTTGCGCCGCTGAACCCACAAATGAGTCACTATCGTGAGTGGTTGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTg                                                                                                                  <  2:583009/143‑1 (MQ=255)                     ttccgccgcTGAACCCACAAACGAGTCACTATCGTGAGTGGTTGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGa                                                                                                                 <  2:794603/140‑1 (MQ=255)                         gccgcTGAACCCACAAATGAGTCACTATCGTGAGTGGTTGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGAGTTGCTGAGttt                                                                                                             >  1:516224/1‑143 (MQ=255)                         gccgcTGAACCCACAAATGAGTCACTATCGTGAGTGGTTGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCCGCGAAAGTCCTCCggcaccgccgacttc                                                                                                             >  1:682247/1‑130 (MQ=255)                           cgcTGAACCCACAAATGAGTCACTATCGTGAGTGGTTGAAATCGGCTGATTTGGCGCTATACAGAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGttttt                                                                                                           <  1:421916/143‑1 (MQ=255)                                 aCCCACAAATGAGTCACTATCGTGAGTGGTTGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGAtt                                                                                                     <  1:503156/143‑1 (MQ=255)                                     acaAATGAGTCACTATCGTGAGTGGTTGAANTCGGCAGATTTGGCGCTTTACAAACCAAAGAAAGCCGGACGTCACCGCACCGAAGTGGCGGCCTGCCGTCCGGCGCAAGTCATAAGGACTTGCTGAGTTTTCCTGATTTTTc                                                                                                 >  2:879499/1‑143 (MQ=255)                                       aaaTGAGTCACTATCGTGAGTGGTTGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCa                                                                                               >  2:822585/1‑143 (MQ=255)                                              tCACTATCGTGAGTGGTTGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACtt                                                                                        >  1:590638/1‑143 (MQ=255)                                                aCTATCGTGAGTGGTTGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGAACGCAGAGGATCATCAGGATTAGCCGAGATTTTCTGATTTGTCCAAACACTTCg                                                                                      >  1:420938/1‑143 (MQ=255)                                                 cTATCGTGAGTGGTTGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGAGTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGt                                                                                     >  1:681399/1‑143 (MQ=255)                                                    tCGTGAGTGGTTGAAATCGGCAGATTTGGCGCCTTACACAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCAt                                                                                  <  2:459946/143‑1 (MQ=255)                                                     cGTGAGGGGGGGAAAGCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATc                                                                                 <  2:726149/143‑1 (MQ=255)                                                               tGAAATGGGCAGATTTTGCGCTTTACAAAGCAAAGAAAGCCGGGCGTAACCGCACCGAAGTGGCGGCCTAACGTCCGGCGAAAGTCATCAGGATCTGCTTAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGATCa                                                                       <  2:121144/143‑1 (MQ=255)                                                                 aaaTCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGATCACt                                                                     <  2:667144/143‑1 (MQ=255)                                                                 aaaTCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCCCTTCGATCAca                                                                     >  2:460013/1‑142 (MQ=255)                                                                    tCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGAGTTGCTGAGTTTTTCTGCTTTTTCCATACACTTCGTCAGCGCTTCGATCACTgca                                                                  >  1:787292/1‑143 (MQ=255)                                                                       gCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATCTGCTGCGCTTTTCTGATCTTTCCATACCCTTCGTCATCGCTTCAATCACTgcaaca                                                               >  1:475709/1‑143 (MQ=255)                                                                        cAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGATCACTgcagccc                                                              <  1:822585/143‑3 (MQ=255)                                                                                    ctagcaaagcaaatGAAGCCGGAGGTCACCGCGCCGAATGGGCGCCTTGTGTTCCGGGGAAAGTCATCAGGATTGGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGATCACTGCAGCACGGAAGCCTTtct                                                  <  1:751264/139‑1 (MQ=255)                                                                                       aCAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGATCACTGCAGCACGGAAGCCTTTCTCtt                                               >  1:357519/1‑143 (MQ=255)                                                                                         aaagcaaagAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGATCACTGCAGCACGGAAACCTTTCTCTTcc                                             >  1:361775/1‑143 (MQ=255)                                                                                           agcaaagAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGCCCGGCGAAAGCCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGATCACTGCAGCACGGACGCCTCTCTCTTcccg                                           >  1:401491/1‑141 (MQ=255)                                                                                              aaagaaagCGGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGATCACTGCAGCACGGAAGCCTTTCTCTTCCAGTAc                                        <  2:779195/143‑1 (MQ=255)                                                                                               aagaaagCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGATCACTGCAGCACGGAAGCCTTTCTCTTCCAGTAcg                                       >  2:148062/1‑143 (MQ=255)                                                                                                    tgCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGATCACTGCAGCACGGAAGCCTTTCTCTTCCAGTACCCGTAc                                  <  1:730492/142‑1 (MQ=255)                                                                                                    agCCGTACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGATCACTGCAGCACGGAAGCCTTTCTCTTCCAGTACGCGTAc                                  <  2:273074/143‑1 (MQ=255)                                                                                                    agCCGGACGTATCCGCACCGAGGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGATCACTGCAGCACGGAAGCCTTTCTCTTCCAGTACGCGTAc                                  <  1:652114/143‑1 (MQ=255)                                                                                                            gTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGATCACTGCAGCACGGAAGCCTTTCTCTTCCAGTACTCGTACCGCTGCaa                          >  2:396471/1‑143 (MQ=255)                                                                                                               aCCGCACCGAAGTGGCGGCCCGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGATCACTGCAGCACGGAAGCCTTTCTCTTCCAGTACGCGTACCGCTTCAAtgg                       <  2:322846/143‑1 (MQ=255)                                                                                                                 tgcacggtggTGGCGGCCTGACTGCCGGCGAAAGTGATCAGTCTTTGCTGAGGTTTTCTGGTTTTGCCATAGAGTTCGTCATCGCTGCGATCACTGCAGCACGGGAGCCGTTCTCTTCCAGTACGCGTACCGCTTCAAtggtg                     <  1:879499/134‑1 (MQ=255)                                                                                                                  gCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGATCACTGCAGCACGGAAGCCTTTCTCTTCCAGTACGCGTACCGCTTCAAtggtgg                    >  2:205728/1‑143 (MQ=255)                                                                                                                     cctacttGGCGGCCTGACGTCCGGCGAGATTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGATCACTGCAGCACGGAAGCCTTTCTCTTCCAGTACGCGTACCGCTTCAATGGTGGTGc                 <  1:658372/137‑1 (MQ=255)                                                                                                                     ccGAAGTGGCGGCCTGAGGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGATCACTGCAGCACGGAAGCCTTTCTCTTCCAGTACGCGTACCGCTTCAATGGTGGTGc                 <  1:843868/143‑1 (MQ=255)                                                                                                                      cGAAGTGGGGGAGGGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGATCACTGCAGCACGGAAGCCTTTCTCTTCCAGTACGCGTACCGCTTCAATGGTGGTGcc                <  2:780539/143‑1 (MQ=255)                                                                                                                            ggcggcCTGACGTCCGGCGAACGTCATCAGGATTTGCTGCGTTTTTCTGATTTTTCCATACACTTCGTCAGCGCTTCGATCACTGCAGCACGGAAGCCTTTCTCTTCCAGTACGCGTACCGCTTCAATGGTGGTGCCTCCCgg          <  1:453874/143‑1 (MQ=255)                                                                                                                             gcgggCTGGCGTCCGGCGAAGGTCATCAGGATTTGCTGAGTTGTTCTGATTTTTCCATACTCTTCGTCATCGCTTCGATCACGGCAGCACGGAAGCCGTTCTCTTCCAGTACGCGTACCGCTTCAATGGTGGTGCCTCCCGGt         <  1:402452/143‑1 (MQ=255)                                                                                                                                  cTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTATGATTTTTCAATACACTTCGTGATAGATTAGATCACTGAAGCACGGAAGCGTTTCTGTTTCAGTACGCGTAGAGTTTCAATGGTTGTGCCTACCGGttaaca    >  1:69889/1‑138 (MQ=255)                                                                                                                                    gACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGATCACTGCAGCACGGAAGCCTATCTCTTCCAGTACGCGTACCGCTTCAATGGTGGTGCCTCCCGGTGAGCAGa  <  2:398733/143‑1 (MQ=255)                                                                                                                                    |                                                                                                                                               TTTACGGATTAGTGTGGGGGTTGCGCCGCTGAACCCACAAATGAGTCACTATCGTGAGTGGTTGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGATCACTGCAGCACGGAAGCCTTTCTCTTCCAGTACGCGTACCGCTTCAATGGTGGTGCCTCCCGGTGAGCAGA  >  NC_000913/404686‑404959

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.