Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 417,368 Δ5 bp coding (227‑231/690 nt) phoB → response regulator in two‑component regulatory system with PhoR

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 417368 417372 5 17 [0] [0] 16 phoB response regulator in two‑component regulatory system with PhoR

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4173670 (0.000)16 (0.760) 14/284 0.4 100% coding (226/690 nt) phoB response regulator in two‑component regulatory system with PhoR
?NC_000913 417373 = 0 (0.000)coding (232/690 nt) phoB response regulator in two‑component regulatory system with PhoR

TCGAAGCGGAAGATTATGACAGTGCTGTGAATCAACTGAATGAACCCTGGCCGGATTTAATTCTCCTCGACTGGATGTTACCTGGCGGCTCCGGTATCCAGTTCATCAAACACCTCAAGCGCGAGTCGATGACCCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/417230‑417367
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCAGTGGTGATGTTGACCGCCAGAGGGGAAGAAGAAGATCGCGTGCGCGGCCTTGAAACCGGCGCGGATGACTATATCACCAAGCCGTTTTCGCCGAAGGAGCTGGTGGCGCGAATCAAAGCGGTAATGCGCCGTATT  >  NC_000913/417373‑417510
                                                                                                                                                                                                                                                                                    
ttGAAGCGGAAGATTATGATAGTGCTGTGAATCTAATGAATGAACCCTGGCCGGATTTAATTCTCCTCGACTGGATGTTACCTGGCGGCTCCGGTATCCAGTTCATAAAACACCTCAAGCGCGAGTCGATGACCCGGGCCAGT                                                                                                                                       <  1:386612/141‑1
TCGAAGCGGAAGATTATGACAGTGCTGTGAATCAACTGAATGAACCCTGGCCGGATTTAATTCTCCTCGATTGTATGTTACCTGGCGGCTCCGGTATCCAGTTCATCAAACACCTCAAGCGCGAGTCGATGACCCGGGCCAGT                                                                                                                                       <  1:206034/143‑1
       gtctgttgttgtcgGTGCTGTGAATTAACTGAATGAACCCTGGGCGGATTTAATTCTCCTCGACGGGGTGTTACCTGGCGGTTCCGGTATCCAGTTCATCAAACACCTCAAGCGCGAGTCGATGACCCGGGCCAGTGGTGATG                                                                                                                                <  2:219735/129‑1
           GATTATGACAGTGCTGTGAATCAACTGAATGAACCCTGGCCGGATTTAATTCTCCTCGACTGGATGTTACCTGGCGGCTCCGGTATCCAGTTCATCAAACACCTCAAGCGCGAGACGATGACCCGGGCCAGGGGTGAGGTTGA                                                                                                                            >  2:371775/1‑143
             ctacGACAGTGCTGTGAATCAACTGAAGGAACCCTGGCCGGATTTAATTCTCCTCGACTGGATGTTACCTGGCGGCTCCGGTATCCAGTTCATCAAACACCTCAAGCGCGAGTCGATGTCCCGGGCCAGTGGTGATGTTGACC                                                                                                                          <  2:336116/139‑1
                 GACAGTGCTGTGATTCAACTAAATGATCCCTGGTCTGTTTTAATTTTCCTCGACTGGATGTTACCTGGCGGCTCCGGTATCCAGTTCATCAAACACCTCAAGCGCGAGTCGATGACCCGGGCCAGTGGTGATGTTGACCGCCA                                                                                                                      <  1:246827/143‑1
                    AGTGCTGTGAATCAACTGAATGAACCCTGGCCGGATTTAATTCTCCTCTTTTTTATGTTACCTGGCGGCTCCGGTATCCAGTTCATCAAACACCTCAAGCGCGAGTCGATGACCCGGGCCAGTGGTGATGTTGACCGCCAGAG                                                                                                                   <  1:20733/143‑1
                                   CTGAATGAACCCTGGCCGGATTTAATTCTCCTCGACTGGATGTTACCTGGCGGCTCCGGTATCCAGTTCATCAATCACCTCCACCGCCAGCCGATGACCCCGGCCCGTGGCGATGTTGACCGCAAGAGCGAAAGAAGAGGATC                                                                                                    >  1:69735/1‑143
                                            CCCTGGCCGGATTTAATTCTCCTCGACTGGATGTTACCTGGCGGCTCCGGTATCCAGTTCATCAAACACATCAAGCGCGAGGCGAGGACCAGGGCCCGCGGAGACGGTGACCGTCAGAGGGGAAGAAGAAGATCGCGTGCGCG                                                                                           <  1:259345/143‑1
                                                      ATTTAATTCTCCTCGACTGGATGTTACCTGGCGGCTCCGGTATCCAGTTCATGAAACACCTCAAGCGCGAGTCGATGACCCGGGCCAGTGGTGATGTTGACCGCCAGAGGGGAAGAAGAAGATCGCGTGCGCGGCCTTGAAAC                                                                                 <  1:386291/143‑1
                                                          attgtTCCTCGGCTGTGTGTTACCGGGCGTCTCCGGTATCCAGTTCATCAAACACCTCAAGCGCGAGTCGATGACCCGGGCCAGTGGTGATGTTGACCGCCAGAGGGGAACAAGAAGATCGCGTGCGCGGCCTTGAAACCGGC                                                                             <  2:45408/138‑1
                                                                                                    GTTCATCAAACACCTCAAGCGCGAGTCGATGACCCGGGCCAGTGGTGATGTTGACCGCCAGCGGGTAAGAAGAAGATCGAGTGCGCGAAATTAAAAAAGGAGCGGATGACTATATCACCAAGCCGTTTTCGCCGAAGGAGCTG                                   >  1:89925/1‑143
                                                                                                     TTCATCAAACACCTCAAGCGCGAGTCGATGACCCGGGCCAGTGGTGATGTTGACCGCCAGAGGGGAAGAAGAAGATCGCGTGCGCGGCCTTGAAACCGGCGCGGATGACTATATCACCAAGCCGTTTTCGCCGAAGGAGCTGG                                  >  2:296856/1‑143
                                                                                                                    cgaccCGAGTCGAGGGCCCGGCTCGTTGGTGATGTTGACCGCCAGAGGGGAAGAAGAAGATCGCGTGCGCGGCCTTTAAACCGGCGCGGATGACTATATCACCAAGCCGTTTTCGCCGAAGGAGCTGGTGGCGCGAATCAAAG                   <  2:148441/138‑1
                                                                                                                                ATGACCCGGGCCAGTGGTGATGTTGACCGCCAGAGGGGAAGAAGAAGATCGCGTGCGCGGCCTTGAAACCGGCGCGGATGACTTTATCACCAAGACGAATTCGACAAAGGAGAAGGTGGCGAGAAACAAAGAGGTAATGaacc       >  1:132105/1‑139
                                                                                                                                     CCGGGCCAGTGGTGATGTTGACCGCCAGAGGGGAAGAAGAAGATCGCGTGCGCGGCCTTGAAACCGGCGCGGATGACTATATCACCAAGCCGTTTTCGCCGGAGGAGCTGGTGGCGCGAATCAAAGCGGTAATACGCCGAATT  >  1:99026/1‑143
                                                                                                                                                                                                                                                                                    
TCGAAGCGGAAGATTATGACAGTGCTGTGAATCAACTGAATGAACCCTGGCCGGATTTAATTCTCCTCGACTGGATGTTACCTGGCGGCTCCGGTATCCAGTTCATCAAACACCTCAAGCGCGAGTCGATGACCCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/417230‑417367
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCAGTGGTGATGTTGACCGCCAGAGGGGAAGAAGAAGATCGCGTGCGCGGCCTTGAAACCGGCGCGGATGACTATATCACCAAGCCGTTTTCGCCGAAGGAGCTGGTGGCGCGAATCAAAGCGGTAATGCGCCGTATT  >  NC_000913/417373‑417510

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.