New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 120780523 (0.550)27 (0.720) 24/252 0.6 53.8% coding (305/630 nt) stfP e14 prophage, uncharacterized protein
?NC_000913 = 1209602 26 (0.700)pseudogene (18/501 nt) stfE pseudogene, e14 prophage, side tail fiber protein fragment family,Phage or Prophage Related

CAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATG  >  NC_000913/1207668‑1207945
                                                                                                                                         |                                                                                                                                             
cAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCACACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCaa                                                                                                                                          >  1:468850/1‑143 (MQ=255)
 agctgggcgaAGGGGCCGCACGACCAGTTACCAGCCGCACTGCGCGCGCTGAGGTCAAGCCGCAAGAATCCGCTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAACCCTTGGTTTGGGAGAAGGAGCaaa                                                                                                                                         <  1:346245/135‑1 (MQ=255)
 aGCCTGGAGAGGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCaaa                                                                                                                                         <  2:122549/143‑1 (MQ=255)
 aGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgc                                                                                                                                         >  2:487557‑M1/1‑137 (MQ=255)
  ttgtagatcggggttcgggtcatgtgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCaaaa                                                                                                                                        >  1:147384‑M1/121‑143 (MQ=255)
     tGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGTAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcatta                                                                                                                                     <  2:464407‑M1/143‑11 (MQ=255)
      ggAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTGGGGAGCAGGgcccagacaca                                                                                                                                    >  1:591666‑M1/1‑132 (MQ=255)
       gagaAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGCTATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGCGAAGGAGCAACACTCaa                                                                                                                                   >  2:242372/1‑143 (MQ=255)
        atctgtggtctggtcatttgttgatacgcgtacataaccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAAt                                                                                                                                  >  2:677788‑M1/115‑143 (MQ=255)
                   cACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTAAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtccc                                                                                                                       <  2:670060‑M1/143‑25 (MQ=255)
                    ggcagttgttgatacgtgtacatagccaataagcatgtttaatctctctaggaaaagcaggaatgatgccatttgctgggtatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCt                                                                                                                      >  1:630697‑M1/103‑143 (MQ=255)
                    aCGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGCGCAAAGCGCCACGCAGCCACGGcc                                                                                                                      >  1:585164/1‑142 (MQ=18)
                      gaacacttacttacCGCACTTCGCGCGCTGCTGTGAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTAc                                                                                                                    <  2:90683/137‑1 (MQ=255)
                      gACGAGTTCTTTTCCTCACGTCGCGCGCTGCGGTGTGGCCGCAAGAAGCCGTTTGGCGATATTAAATCGTATGGCACTGTGCAGACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTAc                                                                                                                    <  1:228312/143‑1 (MQ=21)
                        ccAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAACACCTTGGTCTCGGAGAAGGctctgcattacctgtcggcgtcccggttc                                                                                                                  >  1:702335‑M1/1‑114 (MQ=255)
                            ttacttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtg                                                                                                              >  1:594457‑M1/1‑110 (MQ=255)
                                ttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGccctgcattacctgttggcgtcccggttccgtggcct                                                                                                          >  2:476410‑M1/1‑106 (MQ=255)
                                   ccGCCCTGCGCGCGCTGCTGTTAAGCCGCAAGAATCCGGTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttca                                                                                                       <  1:277285‑M1/143‑41 (MQ=255)
                                    cGCACATCGCGCGCTAATGTTAAGCCGCAAGAATCCGTTTGGCGATAGCAAATCGGATGGCACCGCGCCAACGGATCGCGAAAACCGAGGCTGGGGACAAGGAGCAAAACGCAATGCAGCAACAGCTAGATTAGGACGcgacg                                                                                                      >  1:85401/1‑139 (MQ=19)
                                       acatagccaaaaagcaggttaaatccccctggtaaaagcaggaatcatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGtt                                                                                                   >  2:75698‑M1/84‑143 (MQ=255)
                                         ttCGCGCGCTGCTGTTAAGCCGCCAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAACCGGCTCTCGACAACCTTGGTTTGGGAGAAGGAGCAAAACTCACTGCAGCAACGGCTACATTAGGACGCACCGGTTTc                                                                                                 >  2:522360/1‑143 (MQ=255)
                                         ttCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCGGTCGAAAACCGTGGTTTGGGAGAAGGctctgcattacctgatggtgtccctgttcagtggccttgagccact                                                                                                 >  1:72466‑M1/1‑97 (MQ=255)
                                             cgcgcTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTATCGAAAACCATGGTTTGGGAGAAGGcaatgcattacatgtagatgtaccggttacgttgccttcagccaatacgc                                                                                             >  1:433447‑M1/1‑93 (MQ=255)
                                              caataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGc                                                                                            <  2:390909‑M1/67‑1 (MQ=255)
                                                gctgctGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGTAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGATTCATAGCta                                                                                          >  1:395463/1‑143 (MQ=255)
                                                gctgctGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactctgccac                                                                                          >  2:121545‑M1/1‑90 (MQ=255)
                                                 ctgctgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaac                                                                                         <  1:230436‑M1/143‑55 (MQ=255)
                                                     catgttacatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgCTGGTCTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCg                                                                                     >  2:187562‑M1/70‑143 (MQ=255)
                                                     catgttacacccccatggtaaaagcaggaatggtgccatttgcttgttacttcttcattttcatacacgTTGGTTTCGTAGAAAGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCg                                                                                     >  1:66260‑M1/70‑143 (MQ=255)
                                                         ttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcatagacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTGCATAGCTATCCCGGTTa                                                                                 <  1:637394‑M1/78‑1 (MQ=255)
                                                            gatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGa                                                                              >  1:335748‑M1/63‑143 (MQ=255)
                                                            ccGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctga                                                                              >  2:718306‑M1/1‑78 (MQ=255)
                                                            ccGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattaccggttggggtcccggttccgtggccttcaccgactccgacaacgggctggctgg                                                                              >  1:375687‑M1/1‑78 (MQ=255)
                                                            aatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGa                                                                              >  2:180598‑M1/63‑143 (MQ=255)
                                                              gCAAGAATCCTTTTGGCGATAGCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaa                                                                            <  2:551542‑M1/143‑68 (MQ=255)
                                                              gCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGAACAAACGGCTCTCGAAAACCTTGGTGTGGGAGAAGGctctgcattacctgttggtgtcccggttcagtggccttcaaccacaccaccaacaggctggctgaaa                                                                            >  1:200042‑M1/1‑76 (MQ=255)
                                                                 aGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgc                                                                         <  2:594457‑M1/143‑71 (MQ=255)
                                                                    tggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCACCGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTggtggt                                                                      <  1:83464‑M1/89‑1 (MQ=255)
                                                                     tCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTa                                                                     >  2:114963/1‑143 (MQ=255)
                                                                     tCCGTTTGGCGATATCAAATCGGATGGCACTGTACAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTa                                                                     <  2:701234/143‑1 (MQ=255)
                                                                        gTTTGGCGATATCAAATCGGAGGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGGGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCGTAGCTATGCCGGTTATGATTGGTGGTAttc                                                                  >  2:186959/1‑142 (MQ=255)
                                                                          ttGGCGATATCAAATCGGATGGCACTGCTCAAACGGCACTCTATAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAg                                                                <  2:412603/143‑1 (MQ=255)
                                                                           tGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccg                                                               <  1:487557‑M1/143‑81 (MQ=255)
                                                                               gATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgcttt                                                           >  2:239580‑M1/1‑59 (MQ=255)
                                                                                  atgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGt                                                        >  2:88950‑M1/41‑143 (MQ=255)
                                                                                  atCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttc                                                        >  2:481296‑M1/1‑56 (MQ=255)
                                                                                   tCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCTAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTa                                                       >  1:362553/1‑143 (MQ=255)
                                                                                     aaaTCGGATGGCACTGTGCAAACGGCCCTCGAAAACATTGGTTTGGGAGAAGCACCAAAACGAAATACACCAACAGCTACATTAGGACGCACCGGTTTGCTAGCGATAGCGGTAATGCGTGGGGTGATTGAGAAACAAGTaaa                                                     >  1:520678/1‑142 (MQ=255)
                                                                                      aaTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATCGCTATACCGGTTATGATTGGTGGCATTGAGCAATCAGTAATc                                                    >  1:21529/1‑143 (MQ=255)
                                                                                      aaTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATc                                                    >  1:121260/1‑143 (MQ=255)
                                                                                         cGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaa                                                 <  1:240458‑M1/143‑95 (MQ=255)
                                                                                          ggATGGCACTGTGCAAACGGCGCTCGAAACCCTTGGTTTGGGAGCAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctcctgaag                                                <  1:682188‑M1/143‑96 (MQ=255)
                                                                                          ggAGGGCACTGTGCAAACGGCTCGCGAAAACCTGGGTTGGGGAGAAGGctctgcgttaccggttggtgtcccggtcaccaggccttcagccgcttcgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaag                                                <  1:676831‑M1/143‑96 (MQ=255)
                                                                                                ttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTggg                                         <  2:144712‑M1/117‑1 (MQ=255)
                                                                                                cACTGCGCAAACGGCTCTCAAAAACCGTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTggg                                         <  2:205605/143‑1 (MQ=255)
                                                                                                 aatgttCAAACGTTTCTCGAAAAACTGGGTTTGGGAGAAGGAGCAAAACTCAAGGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTgggg                                        <  2:564796/141‑1 (MQ=255)
                                                                                                  cTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccg                                        <  1:429114‑M1/143‑104 (MQ=255)
                                                                                                   tgtgCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCAtgaacggggggt                                       >  1:627523/1‑132 (MQ=255)
                                                                                                      gacatcgtctgtcgaagaccttggTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggtcttcagcctctccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaac                                    <  1:68187‑M1/132‑108 (MQ=255)
                                                                                                        aaaCGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactg                                  >  2:690599‑M1/1‑34 (MQ=255)
                                                                                                           cGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGcc                              <  1:69989/143‑1 (MQ=255)
                                                                                                            ggCTCTCGAAAACCGTGGTTTGGGAGCAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaa                              <  2:482434‑M1/143‑114 (MQ=255)
                                                                                                                 tcGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGCGCAGTGCGCAATCCTTCAGTGGGGGTGGAATGCCGCaaaa                        >  2:568087/1‑143 (MQ=255)
                                                                                                                     aaaCCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatc                     <  1:690599‑M1/143‑123 (MQ=255)
                                                                                                                       acgTTGGTTTGGGAGAAGGAGCAAAAGTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGCGGGGGTGGAATGCCGCGAAAGCATCt                  >  1:697388‑M1/4‑143 (MQ=255)
                                                                                                                           TGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCct              >  2:362553‑M1/1‑143 (MQ=255)
                                                                                                                              tttGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagcaactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctggagaatacccggaactggcaaaggcttatccgacgaata            >  2:382216‑M1/1‑12 (MQ=255)
                                                                                                                              TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGATAGATCAGGACGCACGGGTTTCATAGCTATAACGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTTAGTGGGGGGGGAATGCCGCAAGAGCATCggcctagt           <  1:157475‑M1/143‑4 (MQ=255)
                                                                                                                                   GAGAAGGACGAGACCTCAAGGCAGGTACGGTGACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTgggggg      >  1:647172‑M1/1‑143 (MQ=255)
                                                                                                                                   GAGAAGGACCAAAGCTGTGTGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTgggggg      >  1:114963‑M1/1‑143 (MQ=255)
                                                                                                                                    AGAAGGAGCAAAACTCACTGCAGCAACGGCGACAGTAGGACGCACCGGTTTCATAGCGATACCGGTTATGACTGGTGGTATTGAGCAATCAGTAAGCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTggggggg     >  2:515194‑M1/1‑143 (MQ=255)
                                                                                                                                      AAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCAGTCAGTGAGGGGTGGAATGCCGCAAAAGCATCAGCCTCGGGGGGGGa    <  1:69414‑M1/143‑1 (MQ=255)
                                                                                                                                       aGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctg   <  1:192256‑M1/143‑141 (MQ=255)
                                                                                                                                        ggctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcagtggtgccgctttttatgctgcaggatacccggaactggcaaaggcttatccgacacataaatgactggg  >  1:255847‑M1/1‑2 (MQ=255)
                                                                                                                                         |                                                                                                                                             
CAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATG  >  NC_000913/1207668‑1207945

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.