New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1267118 =	37 (0.880)	3 (0.070)	3/272	6.3	8.0%	coding (195/393 nt)	ychQ	SIRB family inner membrane protein
	?	NC_000913	1267138 =	34 (0.840)					coding (215/393 nt)	ychQ	SIRB family inner membrane protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GGCTACGTTATCAGAAGCATCCACAGGCATTTGCTCGCTGGACGCGCATTGTGCCGCCGGTTGTCGATACGCTGTTACTGTTAAGCGGCATTGCGTTGATGGCTAAAGCGCACATCCTGCCATTTTCCGGGCAGGCACAGTGGCTGACTGAAAAGCTGTTTGGAGTTATCATTTATATCGTTTTGGGTTTTATTGCACTCGATTATCGTCGTATGCACAGTCAGCAGGCGCGCATTATTGCCTTCCCGCTGGCGTTGGTGGTGCT  >  NC_000913/1267003‑1267267                                                                                                                                        |                                                                                                                                  gtcTACGTTATCAGAAGCATCCACAGGCATTTTCTCGCTGGACGCGCATTGTGCCGGCGGTTGTCGATAACCTGTAACTGTTAGGCGGCATTGCGTTGATGGCTAAAGCGCACATCCTGCCATTTTACGGGCAGGcaccctgc                                                                                                                            >  1:96079/3‑138 (MQ=255) ggCCACGTTATCAGAAGCATCCACAGGCATTTGCTCGCTGGACGCGCATTGTGCCGCCGGTTGTCGATACGCTGTTACTGTTAAGCGGCATTGCGTTGATGGCTAAAGCGCACATCCTGCCATTTTCCGGGCAGGCACAGTgg                                                                                                                            >  1:95979/1‑143 (MQ=255)  gCTACGTTATCAGAAGCATCCACAGGCATTTGCTCGCTGGACGCGCATTGTGCCGCCGGTTGTCGATACGCTGTTACTGTTAAGCGGCATTGCGTTGATGGCTAAAGCGCACATCCTGCCATTTTCCGGGCAGGCACAGTGGc                                                                                                                           >  1:116930/1‑143 (MQ=255)     aCGTTATCAGAAGCATCCACAGGCATTTGCTCGCTGGACGCGCATTGTGCCGCCGGTTGTCGATACGCTGTTACTGTTAAGCGGCATTGCGTTGATGGCTAAAGCGCACATCCTGCCATTTTCCGGGCAGGCACAGTGGctga                                                                                                                        <  2:488686/143‑1 (MQ=255)       gTTATCAGAAGCATCCACAGGCATGTGCTCGCTGGACGCTCATTGTGCCGCCGGTTGTCGAGCCGCTGTTACGGTGAAGCGGCATTGCGTCGATGGCCAGAGCGCACATCCTGCCATTTTCCGGGCAGGCACAGTGGctgact                                                                                                                      <  1:334575/143‑1 (MQ=255)        ttAGCAGAAGCATCCACAGGCATTGGCTCGCTGGACGCGCATTGTGCCGCCGGTGGGCGATACGCCGGTGCTGTTAAGCCGCATTGCGGGGATGGCGAAAGAGCACAGCCGGCAACTTACCGGGCCCGCACAgggcacgcctg                                                                                                                     >  1:542428/1‑133 (MQ=255)            cAGAACCATCCACTGGCATTTGCTCGCTGGACGCGCATTGTGCCGCCGGTTGTCGATACGCTGTTACTGTTAAGCGGCATTGCGTTGACGGCTAAAGCGCACATCCTGCCATTTTCCGGGCAGGCACAGTGGCTGACTGaaaa                                                                                                                 <  2:477776/143‑1 (MQ=255)                  cATCCACCGCCAGTTGCTCGCTCGACGCGCATCGTGCCGACGGTTGTCTATCCGCTCTTACTTTTAAGCGGCATTGCGTTGATGGGTAAAGCGAAAATCCCGCCAACTTCCGGGCAGGCACAGTGGCTGACTGAAAAGCTGtt                                                                                                           <  2:697167/143‑1 (MQ=255)                   aTCCACAGGCATGTGCTCGCTGGACGCGCATTGTGCCGCCGGTTGTCGATACGCTGTTACTGTTAAGCGGCATTGCGTTGATGGCTAAAGCGCACATCCTGCCATTTTCCGGGCAGGCACAGTGGCTGACTGAAAAGCTGttt                                                                                                          <  2:587356/143‑1 (MQ=255)                     ccACAGGCATTTGCTCGCTGGACGCGCATTGTGCCGCCGGTTGTCGATACGCTGTTACTGTTAAGCGGCATTGCGTTGATGGCTAAAGCGCACATCCTGCCATTTTGCGGGCAGGCACAGTGGCTGACTGAAAAGCTGTGTgg                                                                                                        >  2:589353/1‑143 (MQ=255)                             aTTTGCTCGCTGGACGCGCATTGTGCCGCCGGTTGTCGATACGCTGTTACTGTTAAGCGGCATTGCGTTGATGGCTAAAGCGCACATCCTGCCATTTTCCGGGCAGGCACAGTGGCTGACTGAAAAGCTGTTTGGAGTTATCa                                                                                                <  1:269298/143‑1 (MQ=255)                                 gCTCGCTGGACGCGCATTGTGCCGCCGGTTGTCGATACGCTGTTACTGTTAAGCGGCATTGCGTTGATGGCTAAAGCGCACATCCTGCCATTTTCCGGGCAGGCACAGTGGCTGACTGAAAAGCTGTTTGGAGTTATCATTta                                                                                            <  2:266603/143‑1 (MQ=255)                                  cTCGCTGCACGCGCATTGTGCCGCCGGTTGTCGATACGCTGTTACTGTTAAGCGGCATTGCGTTGATGGCTAAAGCGCACATCCTGCCATTTTCCGGGCCGGCACAGTGGCTGACTGAAAAGCTGTTTGGAGTTATCACTtat                                                                                           >  1:654612/1‑143 (MQ=255)                                   tCGCTGGACGCGCATTGTGCCGCCGGTTGTCGATACGCTGTTACTGTTAAGCGGCATTGCGTTGATGGCTAAAGCGCACATCCTGCCATTTTCCGGGCAGGCACAGTGGCTGACTGAAAAGCTGTTTGGAGTTATCATTtata                                                                                          >  2:321032/1‑143 (MQ=255)                                            gcgcATTGTGCCGCCGGTTGTCGATACGCTGTTACTGTTAAGCGGCATTGCGTTGATGGCTAAAGCGCACATCCTGCCATTTTCCGGGCAGGCACAGTGGCTGAGTGAAAAGCTGTTTGGAGGTGTCGTTGATATCGTTTTgg                                                                                 >  2:72146/1‑143 (MQ=255)                                            gcgcATTGTGCCGCCGGTTGTCGATACGCTGTTACTGTTAAGCGGCATTGCGTTGATGGCTAAAGCGCACATCCTGCCATTTTCCGGGCAGGCACAGTGGCTGACTGAAAAGCTGTGTGGAGTTATCATTTATATCGTTTTgg                                                                                 >  1:456072/1‑143 (MQ=255)                                                aTTGTGCCGCCGGTTGTCGATACGCTGTTACTGTTAAGCGGCATTGCGTTGATGGCTAAAGCGCCCATCCTGCCATTTTCAGGGCAGGCACAGTGGCTGACTGTAAAGCTGTTTGGCGTTATCATTTGTATCGTTTTggggtg                                                                             >  2:259603/1‑140 (MQ=255)                                                  tgtgCCGCTGGTTGTCGATACGCTGTTACTGTTAAGCGGCATTGCGTTGATGGCTAAAGCGCACATCCTGCCATTTTCCGGGCAGGCACAGTGGCTGACTGAAAAGCTGTTTGGAGTTATCATTTATATCGTTTTGGGTTTTa                                                                           <  2:180307/143‑1 (MQ=255)                                                       cgccgGTTGTCGATACGCTGTTACTGTTAAGCGGCATTGCGTTGATGGCTAAAGCGCACATCCTGCCATTTTCCGGGCAGGCACAGTGGCTGACTGAAAAGCTGTTTGGAGTTATCATTTATATCGTTTTGGGTTTTATTGCa                                                                      >  2:18820/1‑143 (MQ=255)                                                                    tACGCTGTTACTGTTAAGGGGCATTGCGTTGGTGGCGCTACCCCACAGCCTGCCATTTTCCGGGCAGGCACAGTGGCTGACTGAAAAGCTGTTTGGAGTTATCATTTATATCGTTTTGGGTTTTATTGCACTCGATTAtcgtc                                                         <  1:516008/143‑1 (MQ=255)                                                                           ttactgttaAGCGGCATTGCGTTGATGGCTAGAGCGCACATCCTGCCATTTTCCGGGCAGGCACAGTGGCTGACTGAAAAGCTGTTTGGAGTTATCATTTATATCGTTTTGGGTTTTATTGCACTCGATTATCGTCGTATGca                                                  <  1:128981/143‑1 (MQ=255)                                                                                 tgaaGCGGCATTGCGTTGATGGCTAAAGCGCACAGCCTGCCATTTTCCGGGCAGGCACAGTGGCTGACTGAAAAGCTGTTTGGAGTTATCATTTATATCGTTTTGGGTTTTATTGCACTCGATTATCGTCGTATGCACAGTca                                            <  2:160176/141‑1 (MQ=255)                                                                                  taAGCGGCATTGCGTTGATGGCTAAAGCGCACATCCTGCCATTTTCCGGGCAGGCACAGTGGCTGACTGAAAAGCTGTTTGGAGTTATCATTTATATCGTTTTGGGTTTTATTGCAGTCGATTATCGTCGTATGCACAGTcag                                           >  2:724613/1‑143 (MQ=255)                                                                                        gCATTGCGTTGATGGCTAAAGCGCACATCCTGCCATTTTCCGGGCAGGCACAGTGGCTGACTGAACAGCTGTTTGGAGTTATCATTTATATCGTTTTGGGTTTTATTGCACTCGATTATCGTCGTATCCACAGTCAGCAGgcg                                     >  2:640522/1‑143 (MQ=255)                                                                                         cATTGCGTTGATGGCTAAAGCGCACATCCTGCCATTTTCCGGGCAGGCACAGTGGCTGACTGAAAAGCTGTTTGGAGTTATCATTGATATCGTTTTGGGTTTTATTGCACTAGATTATAGTAGTATGCACAGTCAGCAGgcgc                                    >  1:5081/1‑143 (MQ=255)                                                                                          aTTGCCTTGATCGCTAAACAGGACCTCCTGCCATTTTCCGGGCAGGCACACTGGCTGACTGAAAAGCTTTTTGGAGTTATCATTTATACCGTTGTGGGTTTCATTGCTCTCGATTATCGTCGTATGCACAGTCAGCAGgcgcg                                   <  1:213767/143‑1 (MQ=255)                                                                                                     ggCTAAAGCGCACATCCTGCCATTTTCCGGGCAGGCACAGTGGCTGACTGAACAGCTGTTTGGAGCTATCATTTATATCGTTTTGGGTTTTATTGCACTCGACGACCGTCGTATGCGCAGTCAGCAGGCGCGCcttatgcgct                        >  1:374471/1‑138 (MQ=255)                                                                                                      gCTAAAGCGCACATCCTGCCATTTTCCGGGCAGGCACAGTGGCTGACTGAAAAGCTGTTTGGAGTTATCATGTATATCGTTTTGGGTTTTATTGCACTCGAGTATCGTCGTATGCACAGTCAGCAGGCGCGCATTATTGCCtt                       >  2:195929/1‑143 (MQ=255)                                                                                                        tAAAGCGCACATCCTGCCATTTTCCGGGCAGGCACAGTGGCTGACTGAAAAGCTGTTTGGAGTTATCATTTATCTCGTTTTGGGTCTTATTGCACTCGCTTATCGTCGTATGCACAGTCAGCAGGCGCGCATTATTGCCttgc                     >  1:369525/1‑141 (MQ=255)                                                                                                         aaaGCGCACATCCTGCCATTTTCCGGGCAGGCACAGTGGCTGACTGAAAAGCTGTTTGGAGTTATCATTTATATCGTTTTGGGTTTTATTGCACTCGATTATCGTCGTATGCACAGTCAGCAGGCGCGCATTCTTGCCTTccc                    >  2:241061/1‑143 (MQ=255)                                                                                                         aaaGCGCACATCCTGCCATTTTCCGGGCAGGCACAGTGGCTGACTGAAAAGCTGTTTGGAGTTATCATATATATCGTTTTGGGTTTTATTGCACTCGATTATCGTCGTATGCACAGTCAGCAGGCGCGCATTATTGCCTTccc                    >  2:638550/1‑143 (MQ=255)                                                                                                            gcgcACATCCTGCCATTTTCCGGGCAGGCACAGTGGCTGACTGAAAAGCTGTTTGGAGTTATCATTTATATCGTTTTGGGTTTTATTGCACTCGATTATCGTCGTATGCACAGTCAGCAGGCGCGCATTATTGCCTTCCCGCt                 >  2:358167/1‑143 (MQ=255)                                                                                                             cgcACTTCCTGCCATCTTCCGCGCAAGCACAGGGGCTGACTGAAAAGCTGTTTGGAGTTATCATTTATATCGTTTTGGGTTTTATTGCCCTCGATTATCGTCGTATGCACAGTCAGCAGGCGCGCATTATTGCCTTCCCGCTg                <  1:149394/143‑1 (MQ=255)                                                                                                                acaGCCTGCCATTTTCCGGGCAGGCACAGTGGCTGACTGAAAAGCTGTTTGGAGTTATCATTTATATCGTTTTGGGTTTTATTGCGCTCGATTATCGTCGTATGCACAGTCAGCAGGCGCGCATTATTGCCTTCCCGCTGGCg             <  1:507297/143‑1 (MQ=255)                                                                                                                           ttttCCGGGCAGACACAGTGGCTGACTGTGAAGCTGTTTGGAGTTATCATTTATATCGTTTTGGGTTTTAGTGCACTCGATTATCGTCGTATGCACAGTCAGCAGGCGCGCATTATTGCCTTCCCGCTGGCGTTGGTGGTGCt  <  1:696013/143‑1 (MQ=255)                                                                                                                                        |                                                                                                                                  GGCTACGTTATCAGAAGCATCCACAGGCATTTGCTCGCTGGACGCGCATTGTGCCGCCGGTTGTCGATACGCTGTTACTGTTAAGCGGCATTGCGTTGATGGCTAAAGCGCACATCCTGCCATTTTCCGGGCAGGCACAGTGGCTGACTGAAAAGCTGTTTGGAGTTATCATTTATATCGTTTTGGGTTTTATTGCACTCGATTATCGTCGTATGCACAGTCAGCAGGCGCGCATTATTGCCTTCCCGCTGGCGTTGGTGGTGCT  >  NC_000913/1267003‑1267267

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.