Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	1293040	1303172	10133	33 [0]	[0] 41	tdk–[oppB]	tdk, insZ, insZ, insZ, adhE, ychE, oppA, [oppB]

CAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGC  >  NC_000913/1292899‑1293172                                                                                                                                             |                                                                                                                                      caaaactgaaggggctgcgcggattgtAGTTATCTCAACCCTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTCCAATAGCCATGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGgg                                                                                                                                     >  2:647350‑M2/14‑141 (MQ=255)    aaTTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAAGGTAAGGAATTCAAAATTGTTCTTTATTGTGTTCCTggtaa                                                                                                                                  <  1:889‑M2/143‑6 (MQ=255)           aGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGTGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactcc                                                                                                                           >  1:220905‑M2/1‑131 (MQ=255)             tGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaa                                                                                                                         >  2:76382‑M2/1‑129 (MQ=255)                    cTCATTGCAGTAAGCTATTTCTTGTATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattg                                                                                                                  >  1:544046‑M2/1‑122 (MQ=255)                       aTTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgata                                                                                                               >  2:131748‑M2/1‑119 (MQ=255)                        ttGTAGTAATCTCAAACTTATAATGGGTGGACTAGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatag                                                                                                              <  1:445563‑M2/143‑26 (MQ=255)                                aTCTCAAACTTATTTTGTGGTGTTTTGTTGAGGTAATAATAGAGCCCTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttat                                                                                                      >  1:544003‑M2/1‑110 (MQ=255)                                   tcAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAGTAGCCAGGCATGTAAGGAATTCATAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgtt                                                                                                   <  2:339758‑M2/143‑37 (MQ=255)                                   tcAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgtt                                                                                                   >  2:317163‑M2/1‑107 (MQ=255)                                              ttGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcc                                                                                        >  2:252543‑M2/1‑96 (MQ=255)                                              ttGGGGTGGTTTGTTGAGGTAATAACAGAGGCTTAAATTCAGTTGTGCAATAGCCAGGGATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCAGggtaatgacgccaactgaatgatagtgatttatgttaagataaggca                                                                                        <  1:485970‑M2/143‑48 (MQ=255)                                                   gtggtTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGACTCCAAAATTGCTCTTTATTTTGTGCCGggtcatgactccaacttatagatagtgaaatatgtacacataatgccagatg                                                                                   <  2:53114‑M2/143‑53 (MQ=255)                                                    tggtTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatga                                                                                  >  2:558590‑M2/1‑90 (MQ=255)                                                       tttGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTCTTTTAAGTTCTGTGGggtaagaacaccaacttattgatagtgttttatgttcagataatgcccgatgactt                                                                               <  1:712680‑M2/143‑57 (MQ=255)                                                        ttgttgAGGTAATAATAGAGACTTAAATTCAGGTGTGCAATAGCCAGGAATATAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgctgacttt                                                                              <  1:383963‑M2/143‑58 (MQ=255)                                                         tgttgAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTATTTCTTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatggctttg                                                                             <  2:330857‑M2/143‑59 (MQ=255)                                                               ggTAATAATAGAGCCTTAAATTCAGTTGTGCAAGAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgc                                                                       >  2:582500‑M2/1‑79 (MQ=255)                                                                       taGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccac                                                               >  1:430812‑M2/1‑71 (MQ=255)                                                                            ccTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatt                                                          <  2:471386‑M2/143‑78 (MQ=255)                                                                               taggttcggtTGTGCAATAGTCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCTggtaatgactccaacttattgatagtgttttatgttcagataatgccagatgactttgtcatgcagctccaccgattttg                                                       >  1:655955‑M2/5‑63 (MQ=255)                                                                               tAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTGTGAAGGATGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttg                                                       >  1:154522‑M2/1‑63 (MQ=255)                                                                                aaaTTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttga                                                      >  2:320131‑M2/1‑62 (MQ=255)                                                                                           tgCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatttggagaacgacagcg                                           <  1:382460‑M2/143‑93 (MQ=255)                                                                                                  gCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgtttaatggtcagatactgccacatgcttttgttatgcagctccaccgattttgagaacgggggggagttcgg                                    <  2:308003‑M2/143‑100 (MQ=255)                                                                                                   ccAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgt                                   >  2:519488‑M2/1‑43 (MQ=255)                                                                                                    cAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtc                                  <  2:658984‑M2/143‑102 (MQ=255)                                                                                                             aaGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtg                         <  2:497098‑M2/143‑111 (MQ=255)                                                                                                              aGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcgcgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgc                        >  1:194577‑M2/1‑32 (MQ=255)                                                                                                                           tGTTCGTTGTTTTGCTCGTggtaatgactccaacttagtgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctc           >  1:213732‑M2/1‑19 (MQ=255)                                                                                                                               cTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagccccaccagtttttcgaccgacagtgacttccctcccagccgtgccaggcgctgcctgagat       <  1:180887‑M2/143‑129 (MQ=255)                                                                                                                                 ttATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcaacttccgtcccagccgtgccaggtgctgcatcagattc     <  2:602330‑M2/143‑131 (MQ=255)                                                                                                                                    ttttGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcagg  >  2:196160‑M2/1‑10 (MQ=255)                                                                                                                                             |                                                                                                                                      CAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGC  >  NC_000913/1292899‑1293172

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑